Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 MIR184-201ENST00000384962 84 ntBASIC3.58□□□□□ -1.84
SHMT2P34897 RPL21P17-201ENST00000397467 475 ntBASIC3.58□□□□□ -1.84
SHMT2P34897 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SHMT2P34897 HMGB3P18-201ENST00000406327 590 ntBASIC3.58□□□□□ -1.84
SHMT2P34897 MTATP6P31-201ENST00000406985 692 ntBASIC3.58□□□□□ -1.84
SHMT2P34897 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
SHMT2P34897 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.58□□□□□ -1.84
SHMT2P34897 MOB1AP1-201ENST00000430903 535 ntBASIC3.58□□□□□ -1.84
SHMT2P34897 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.58□□□□□ -1.84
SHMT2P34897 USP9YP7-201ENST00000436723 430 ntBASIC3.58□□□□□ -1.84
SHMT2P34897 AC074367.1-201ENST00000438685 1125 ntBASIC3.58□□□□□ -1.84
SHMT2P34897 RPS3AP46-201ENST00000448352 682 ntBASIC3.58□□□□□ -1.84
SHMT2P34897 AC010655.1-201ENST00000449336 292 ntBASIC3.58□□□□□ -1.84
SHMT2P34897 MRPS31P2-201ENST00000451581 518 ntBASIC3.58□□□□□ -1.84
SHMT2P34897 USP9YP32-201ENST00000452432 430 ntBASIC3.58□□□□□ -1.84
SHMT2P34897 AC099563.1-201ENST00000456086 418 ntBASIC3.58□□□□□ -1.84
SHMT2P34897 HMGN2P7-201ENST00000456186 273 ntBASIC3.58□□□□□ -1.84
SHMT2P34897 RPL30P11-201ENST00000495304 339 ntBASIC3.58□□□□□ -1.84
SHMT2P34897 AC023050.1-201ENST00000498198 304 ntBASIC3.58□□□□□ -1.84
SHMT2P34897 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.58□□□□□ -1.84
SHMT2P34897 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.58□□□□□ -1.84
SHMT2P34897 AC007991.1-201ENST00000522680 631 ntBASIC3.58□□□□□ -1.84
SHMT2P34897 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.58□□□□□ -1.84
SHMT2P34897 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SHMT2P34897 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.58□□□□□ -1.84
SHMT2P34897 AC104229.1-201ENST00000561364 255 ntBASIC3.58□□□□□ -1.84
SHMT2P34897 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.58□□□□□ -1.84
SHMT2P34897 MIR4738-201ENST00000579134 87 ntBASIC3.58□□□□□ -1.84
SHMT2P34897 PCNAP1-202ENST00000595299 752 ntBASIC3.58□□□□□ -1.84
SHMT2P34897 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.58□□□□□ -1.84
SHMT2P34897 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.58□□□□□ -1.84
SHMT2P34897 AC039056.2-201ENST00000622261 511 ntBASIC3.58□□□□□ -1.84
SHMT2P34897 AC097372.4-201ENST00000625025 466 ntBASIC3.58□□□□□ -1.84
SHMT2P34897 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.58□□□□□ -1.84
SHMT2P34897 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.58□□□□□ -1.84
SHMT2P34897 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SHMT2P34897 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
SHMT2P34897 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SHMT2P34897 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SHMT2P34897 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SHMT2P34897 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SHMT2P34897 RNA5SP124-201ENST00000362739 110 ntBASIC3.57□□□□□ -1.84
SHMT2P34897 U3.15-201ENST00000365398 212 ntBASIC3.57□□□□□ -1.84
SHMT2P34897 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
SHMT2P34897 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SHMT2P34897 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SHMT2P34897 SOD2P1-201ENST00000396543 562 ntBASIC3.57□□□□□ -1.84
SHMT2P34897 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SHMT2P34897 MIR1303-201ENST00000408625 86 ntBASIC3.57□□□□□ -1.84
SHMT2P34897 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
SHMT2P34897 RNU4-27P-201ENST00000410889 139 ntBASIC3.57□□□□□ -1.84
SHMT2P34897 HMGB3P31-201ENST00000413333 595 ntBASIC3.57□□□□□ -1.84
SHMT2P34897 HMGB3P20-201ENST00000417997 600 ntBASIC3.57□□□□□ -1.84
SHMT2P34897 AC114814.2-201ENST00000419195 485 ntBASIC3.57□□□□□ -1.84
SHMT2P34897 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SHMT2P34897 AL035423.1-201ENST00000420331 213 ntBASIC3.57□□□□□ -1.84
SHMT2P34897 RPL30P3-201ENST00000424262 333 ntBASIC3.57□□□□□ -1.84
SHMT2P34897 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.57□□□□□ -1.84
SHMT2P34897 AL512661.1-201ENST00000434586 1253 ntBASIC3.57□□□□□ -1.84
SHMT2P34897 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
SHMT2P34897 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.57□□□□□ -1.84
SHMT2P34897 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC3.57□□□□□ -1.84
SHMT2P34897 AC007537.2-201ENST00000472093 511 ntBASIC3.57□□□□□ -1.84
SHMT2P34897 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.57□□□□□ -1.84
SHMT2P34897 FTH1P24-201ENST00000503502 462 ntBASIC3.57□□□□□ -1.84
SHMT2P34897 AC100871.1-201ENST00000507871 1456 ntBASIC3.57□□□□□ -1.84
SHMT2P34897 AC026784.1-201ENST00000507986 352 ntBASIC3.57□□□□□ -1.84
SHMT2P34897 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.57□□□□□ -1.84
SHMT2P34897 RNU1-95P-201ENST00000516357 160 ntBASIC3.57□□□□□ -1.84
SHMT2P34897 RNU1-128P-201ENST00000516704 160 ntBASIC3.57□□□□□ -1.84
SHMT2P34897 HMGB1P23-201ENST00000518743 568 ntBASIC3.57□□□□□ -1.84
SHMT2P34897 TRMT10BP1-201ENST00000519377 943 ntBASIC3.57□□□□□ -1.84
SHMT2P34897 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.57□□□□□ -1.84
SHMT2P34897 OR4A2P-201ENST00000527276 913 ntBASIC3.57□□□□□ -1.84
SHMT2P34897 OR5AP1P-201ENST00000529730 940 ntBASIC3.57□□□□□ -1.84
SHMT2P34897 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.57□□□□□ -1.84
SHMT2P34897 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.57□□□□□ -1.84
SHMT2P34897 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.57□□□□□ -1.84
SHMT2P34897 ZNF285B-201ENST00000561698 1767 ntBASIC3.57□□□□□ -1.84
SHMT2P34897 AC245389.1-201ENST00000605141 529 ntBASIC3.57□□□□□ -1.84
SHMT2P34897 AC073073.2-201ENST00000609827 2578 ntBASIC3.57□□□□□ -1.84
SHMT2P34897 RNVU1-4-201ENST00000612985 164 ntBASIC3.57□□□□□ -1.84
SHMT2P34897 AL512506.1-201ENST00000613918 449 ntBASIC3.57□□□□□ -1.84
SHMT2P34897 AL391261.4-201ENST00000616012 481 ntBASIC3.57□□□□□ -1.84
SHMT2P34897 AC097460.3-201ENST00000623099 442 ntBASIC3.57□□□□□ -1.84
SHMT2P34897 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.57□□□□□ -1.84
SHMT2P34897 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.57□□□□□ -1.84
SHMT2P34897 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.57□□□□□ -1.84
SHMT2P34897 AC022031.1-201ENST00000585985 2593 ntBASIC3.57□□□□□ -1.84
SHMT2P34897 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SHMT2P34897 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
SHMT2P34897 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SHMT2P34897 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
SHMT2P34897 RNU6-543P-201ENST00000362576 108 ntBASIC3.56□□□□□ -1.84
SHMT2P34897 AL359837.1-201ENST00000381357 287 ntBASIC3.56□□□□□ -1.84
SHMT2P34897 SNORA5A-201ENST00000384111 134 ntBASIC3.56□□□□□ -1.84
SHMT2P34897 MIR200C-201ENST00000384980 68 ntBASIC3.56□□□□□ -1.84
SHMT2P34897 UBE2V1P11-201ENST00000411559 285 ntBASIC3.56□□□□□ -1.84
SHMT2P34897 ATP5A1P2-201ENST00000412323 255 ntBASIC3.56□□□□□ -1.84
SHMT2P34897 RAB9AP3-201ENST00000412737 573 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms