Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 IGKV1-32-201ENST00000519290 311 ntBASIC4.91□□□□□ -1.62
SLC6A4P31645 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.91□□□□□ -1.62
SLC6A4P31645 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.91□□□□□ -1.62
SLC6A4P31645 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.91□□□□□ -1.62
SLC6A4P31645 AL110118.1-201ENST00000553543 400 ntBASIC4.91□□□□□ -1.62
SLC6A4P31645 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.91□□□□□ -1.62
SLC6A4P31645 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.91□□□□□ -1.62
SLC6A4P31645 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SLC6A4P31645 AC105129.1-201ENST00000560250 297 ntBASIC4.91□□□□□ -1.62
SLC6A4P31645 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.91□□□□□ -1.62
SLC6A4P31645 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.91□□□□□ -1.62
SLC6A4P31645 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC4.91□□□□□ -1.62
SLC6A4P31645 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SLC6A4P31645 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.91□□□□□ -1.62
SLC6A4P31645 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.91□□□□□ -1.62
SLC6A4P31645 AP001521.1-201ENST00000609150 300 ntBASIC4.91□□□□□ -1.62
SLC6A4P31645 WT1-AS_8.1-201ENST00000615200 275 ntBASIC4.91□□□□□ -1.62
SLC6A4P31645 AC116165.2-201ENST00000616705 206 ntBASIC4.91□□□□□ -1.62
SLC6A4P31645 AC068137.3-201ENST00000639191 341 ntBASIC4.91□□□□□ -1.62
SLC6A4P31645 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC4.91□□□□□ -1.62
SLC6A4P31645 AC073869.6-201ENST00000640656 341 ntBASIC4.91□□□□□ -1.62
SLC6A4P31645 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.91□□□□□ -1.62
SLC6A4P31645 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.91□□□□□ -1.62
SLC6A4P31645 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.91□□□□□ -1.62
SLC6A4P31645 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
SLC6A4P31645 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SLC6A4P31645 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
SLC6A4P31645 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
SLC6A4P31645 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.91□□□□□ -1.62
SLC6A4P31645 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
SLC6A4P31645 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SLC6A4P31645 THAP12P5-201ENST00000405864 2275 ntBASIC4.9□□□□□ -1.62
SLC6A4P31645 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SLC6A4P31645 OR4G11P-202ENST00000642116 1414 ntBASIC4.9□□□□□ -1.62
SLC6A4P31645 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
SLC6A4P31645 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SLC6A4P31645 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SLC6A4P31645 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
SLC6A4P31645 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SLC6A4P31645 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
SLC6A4P31645 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.9□□□□□ -1.62
SLC6A4P31645 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
SLC6A4P31645 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SLC6A4P31645 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SLC6A4P31645 RNU2-50P-201ENST00000410494 143 ntBASIC4.9□□□□□ -1.63
SLC6A4P31645 RN7SKP106-201ENST00000410832 272 ntBASIC4.9□□□□□ -1.63
SLC6A4P31645 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.9□□□□□ -1.63
SLC6A4P31645 RPL37P1-201ENST00000432310 284 ntBASIC4.9□□□□□ -1.63
SLC6A4P31645 AL359265.2-201ENST00000434367 631 ntBASIC4.9□□□□□ -1.63
SLC6A4P31645 MTND1P28-201ENST00000435623 950 ntBASIC4.9□□□□□ -1.63
SLC6A4P31645 AC016831.4-201ENST00000438302 307 ntBASIC4.9□□□□□ -1.63
SLC6A4P31645 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.9□□□□□ -1.63
SLC6A4P31645 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.9□□□□□ -1.63
SLC6A4P31645 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.9□□□□□ -1.63
SLC6A4P31645 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.9□□□□□ -1.63
SLC6A4P31645 CEACAMP6-201ENST00000452007 574 ntBASIC4.9□□□□□ -1.63
SLC6A4P31645 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SLC6A4P31645 AC079168.2-201ENST00000453977 416 ntBASIC4.9□□□□□ -1.63
SLC6A4P31645 AC010326.1-201ENST00000462726 602 ntBASIC4.9□□□□□ -1.63
SLC6A4P31645 RN7SL354P-201ENST00000469282 294 ntBASIC4.9□□□□□ -1.63
SLC6A4P31645 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
SLC6A4P31645 RPL23AP72-201ENST00000492447 435 ntBASIC4.9□□□□□ -1.63
SLC6A4P31645 MTCYBP17-201ENST00000503579 789 ntBASIC4.9□□□□□ -1.63
SLC6A4P31645 AC114981.1-201ENST00000503897 678 ntBASIC4.9□□□□□ -1.63
SLC6A4P31645 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.9□□□□□ -1.63
SLC6A4P31645 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
SLC6A4P31645 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.9□□□□□ -1.63
SLC6A4P31645 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.9□□□□□ -1.63
SLC6A4P31645 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.9□□□□□ -1.63
SLC6A4P31645 RNU1-6P-201ENST00000516290 144 ntBASIC4.9□□□□□ -1.63
SLC6A4P31645 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.9□□□□□ -1.63
SLC6A4P31645 AL139174.1-201ENST00000531489 886 ntBASIC4.9□□□□□ -1.63
SLC6A4P31645 AC068587.4-201ENST00000533893 186 ntBASIC4.9□□□□□ -1.63
SLC6A4P31645 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.9□□□□□ -1.63
SLC6A4P31645 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.9□□□□□ -1.63
SLC6A4P31645 AC068993.1-201ENST00000546724 589 ntBASIC4.9□□□□□ -1.63
SLC6A4P31645 FKBP1BP1-201ENST00000553366 325 ntBASIC4.9□□□□□ -1.63
SLC6A4P31645 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.9□□□□□ -1.63
SLC6A4P31645 SULT1C2P1-202ENST00000562418 459 ntBASIC4.9□□□□□ -1.63
SLC6A4P31645 AC136619.2-201ENST00000563361 631 ntBASIC4.9□□□□□ -1.63
SLC6A4P31645 RN7SL690P-201ENST00000582087 240 ntBASIC4.9□□□□□ -1.63
SLC6A4P31645 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.9□□□□□ -1.63
SLC6A4P31645 AC073091.2-201ENST00000603205 907 ntBASIC4.9□□□□□ -1.63
SLC6A4P31645 AC112187.2-201ENST00000604345 283 ntBASIC4.9□□□□□ -1.63
SLC6A4P31645 AC107214.2-201ENST00000608204 634 ntBASIC4.9□□□□□ -1.63
SLC6A4P31645 AC243773.3-201ENST00000613270 256 ntBASIC4.9□□□□□ -1.63
SLC6A4P31645 AL121890.2-201ENST00000617644 465 ntBASIC4.9□□□□□ -1.63
SLC6A4P31645 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.9□□□□□ -1.63
SLC6A4P31645 AL356596.1-201ENST00000624230 379 ntBASIC4.9□□□□□ -1.63
SLC6A4P31645 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.63
SLC6A4P31645 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.9□□□□□ -1.63
SLC6A4P31645 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SLC6A4P31645 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SLC6A4P31645 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.63
SLC6A4P31645 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.9□□□□□ -1.63
SLC6A4P31645 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SLC6A4P31645 AL031985.3-201ENST00000565390 2449 ntBASIC4.89□□□□□ -1.63
SLC6A4P31645 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
SLC6A4P31645 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SLC6A4P31645 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms