Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 AC103988.1-201ENST00000566382 2177 ntBASIC3.82□□□□□ -1.8
CASQ1P31415 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CASQ1P31415 RNU4-39P-201ENST00000362455 127 ntBASIC3.82□□□□□ -1.8
CASQ1P31415 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CASQ1P31415 AC092642.1-201ENST00000392417 425 ntBASIC3.82□□□□□ -1.8
CASQ1P31415 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.82□□□□□ -1.8
CASQ1P31415 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.82□□□□□ -1.8
CASQ1P31415 SNORA11.5-201ENST00000408163 128 ntBASIC3.82□□□□□ -1.8
CASQ1P31415 NDUFB4P5-201ENST00000415445 361 ntBASIC3.82□□□□□ -1.8
CASQ1P31415 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.82□□□□□ -1.8
CASQ1P31415 COX6CP17-201ENST00000421389 185 ntBASIC3.82□□□□□ -1.8
CASQ1P31415 AC023141.6-201ENST00000429418 337 ntBASIC3.82□□□□□ -1.8
CASQ1P31415 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.82□□□□□ -1.8
CASQ1P31415 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.82□□□□□ -1.8
CASQ1P31415 RPL37P1-201ENST00000432310 284 ntBASIC3.82□□□□□ -1.8
CASQ1P31415 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.82□□□□□ -1.8
CASQ1P31415 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.82□□□□□ -1.8
CASQ1P31415 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.82□□□□□ -1.8
CASQ1P31415 HMGN1P18-201ENST00000457642 277 ntBASIC3.82□□□□□ -1.8
CASQ1P31415 AC107398.1-201ENST00000486904 505 ntBASIC3.82□□□□□ -1.8
CASQ1P31415 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.82□□□□□ -1.8
CASQ1P31415 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CASQ1P31415 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CASQ1P31415 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.82□□□□□ -1.8
CASQ1P31415 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.82□□□□□ -1.8
CASQ1P31415 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.82□□□□□ -1.8
CASQ1P31415 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC3.82□□□□□ -1.8
CASQ1P31415 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.82□□□□□ -1.8
CASQ1P31415 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.82□□□□□ -1.8
CASQ1P31415 RNU4-89P-201ENST00000607443 133 ntBASIC3.82□□□□□ -1.8
CASQ1P31415 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.82□□□□□ -1.8
CASQ1P31415 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CASQ1P31415 AP001784.1-201ENST00000624107 428 ntBASIC3.82□□□□□ -1.8
CASQ1P31415 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CASQ1P31415 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CASQ1P31415 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.82□□□□□ -1.8
CASQ1P31415 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CASQ1P31415 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.82□□□□□ -1.8
CASQ1P31415 AC117529.2-201ENST00000512159 2068 ntBASIC3.82□□□□□ -1.8
CASQ1P31415 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.81□□□□□ -1.8
CASQ1P31415 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.81□□□□□ -1.8
CASQ1P31415 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CASQ1P31415 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
CASQ1P31415 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CASQ1P31415 MIR148B-201ENST00000362252 99 ntBASIC3.81□□□□□ -1.8
CASQ1P31415 RNU6-50P-201ENST00000362356 103 ntBASIC3.81□□□□□ -1.8
CASQ1P31415 DYNLT3P1-201ENST00000378574 347 ntBASIC3.81□□□□□ -1.8
CASQ1P31415 U3.22-201ENST00000391120 215 ntBASIC3.81□□□□□ -1.8
CASQ1P31415 AL583834.1-201ENST00000406943 343 ntBASIC3.81□□□□□ -1.8
CASQ1P31415 MTATP6P31-201ENST00000406985 692 ntBASIC3.81□□□□□ -1.8
CASQ1P31415 OR8G2P-201ENST00000412796 908 ntBASIC3.81□□□□□ -1.8
CASQ1P31415 AC245291.1-201ENST00000419501 328 ntBASIC3.81□□□□□ -1.8
CASQ1P31415 SDCBPP2-201ENST00000424643 885 ntBASIC3.81□□□□□ -1.8
CASQ1P31415 OR2B8P-201ENST00000432841 938 ntBASIC3.81□□□□□ -1.8
CASQ1P31415 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.81□□□□□ -1.8
CASQ1P31415 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.81□□□□□ -1.8
CASQ1P31415 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.81□□□□□ -1.8
CASQ1P31415 AC016724.1-201ENST00000453215 421 ntBASIC3.81□□□□□ -1.8
CASQ1P31415 AC021205.2-201ENST00000480069 347 ntBASIC3.81□□□□□ -1.8
CASQ1P31415 GAPDHP36-201ENST00000480688 918 ntBASIC3.81□□□□□ -1.8
CASQ1P31415 ATG10-AS1-201ENST00000504846 648 ntBASIC3.81□□□□□ -1.8
CASQ1P31415 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC3.81□□□□□ -1.8
CASQ1P31415 AC016550.3-201ENST00000515706 767 ntBASIC3.81□□□□□ -1.8
CASQ1P31415 SNORA64.4-201ENST00000516632 81 ntBASIC3.81□□□□□ -1.8
CASQ1P31415 SNORA70.19-201ENST00000516717 90 ntBASIC3.81□□□□□ -1.8
CASQ1P31415 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.81□□□□□ -1.8
CASQ1P31415 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.81□□□□□ -1.8
CASQ1P31415 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.81□□□□□ -1.8
CASQ1P31415 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CASQ1P31415 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.81□□□□□ -1.8
CASQ1P31415 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.81□□□□□ -1.8
CASQ1P31415 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.81□□□□□ -1.8
CASQ1P31415 AC090751.1-201ENST00000566966 267 ntBASIC3.81□□□□□ -1.8
CASQ1P31415 AC012182.1-201ENST00000570133 895 ntBASIC3.81□□□□□ -1.8
CASQ1P31415 MTCO3P24-201ENST00000572729 782 ntBASIC3.81□□□□□ -1.8
CASQ1P31415 AC091488.1-201ENST00000604239 660 ntBASIC3.81□□□□□ -1.8
CASQ1P31415 ARF4P1-201ENST00000605447 541 ntBASIC3.81□□□□□ -1.8
CASQ1P31415 AC004832.5-201ENST00000608677 401 ntBASIC3.81□□□□□ -1.8
CASQ1P31415 MIR6862-1-201ENST00000613016 70 ntBASIC3.81□□□□□ -1.8
CASQ1P31415 MIR6862-2-201ENST00000614755 70 ntBASIC3.81□□□□□ -1.8
CASQ1P31415 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.81□□□□□ -1.8
CASQ1P31415 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.81□□□□□ -1.8
CASQ1P31415 FAM35CP-201ENST00000554755 2470 ntBASIC3.81□□□□□ -1.8
CASQ1P31415 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.81□□□□□ -1.8
CASQ1P31415 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.81□□□□□ -1.8
CASQ1P31415 ZNF37BP-203ENST00000452306 1352 ntBASIC3.8□□□□□ -1.8
CASQ1P31415 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CASQ1P31415 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CASQ1P31415 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.8□□□□□ -1.8
CASQ1P31415 AL121972.1-201ENST00000402023 252 ntBASIC3.8□□□□□ -1.8
CASQ1P31415 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.8□□□□□ -1.8
CASQ1P31415 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.8□□□□□ -1.8
CASQ1P31415 BX890604.2-201ENST00000427883 474 ntBASIC3.8□□□□□ -1.8
CASQ1P31415 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.8□□□□□ -1.8
CASQ1P31415 B3GNT2P1-201ENST00000434960 952 ntBASIC3.8□□□□□ -1.8
CASQ1P31415 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.8□□□□□ -1.8
CASQ1P31415 AC093392.2-201ENST00000450682 337 ntBASIC3.8□□□□□ -1.8
CASQ1P31415 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
CASQ1P31415 AC104689.1-201ENST00000473356 768 ntBASIC3.8□□□□□ -1.8
CASQ1P31415 SYPL1P1-201ENST00000473622 768 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms