Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 COX6CP8-201ENST00000522620 226 ntBASIC4.5□□□□□ -1.69
CPS1P31327 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.5□□□□□ -1.69
CPS1P31327 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.5□□□□□ -1.69
CPS1P31327 MIR622-201ENST00000638396 96 ntBASIC4.5□□□□□ -1.69
CPS1P31327 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.5□□□□□ -1.69
CPS1P31327 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CPS1P31327 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
CPS1P31327 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CPS1P31327 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.49□□□□□ -1.69
CPS1P31327 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.49□□□□□ -1.69
CPS1P31327 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.49□□□□□ -1.69
CPS1P31327 AC112492.1-201ENST00000449607 712 ntBASIC4.49□□□□□ -1.69
CPS1P31327 snoU13.26-201ENST00000459452 105 ntBASIC4.49□□□□□ -1.69
CPS1P31327 AC107934.2-201ENST00000518653 310 ntBASIC4.49□□□□□ -1.69
CPS1P31327 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.49□□□□□ -1.69
CPS1P31327 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.49□□□□□ -1.69
CPS1P31327 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.49□□□□□ -1.69
CPS1P31327 AL590808.1-201ENST00000618696 141 ntBASIC4.49□□□□□ -1.69
CPS1P31327 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CPS1P31327 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CPS1P31327 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
CPS1P31327 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CPS1P31327 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.48□□□□□ -1.69
CPS1P31327 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CPS1P31327 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CPS1P31327 RPL23AP67-201ENST00000465341 474 ntBASIC4.48□□□□□ -1.69
CPS1P31327 RPS17P11-201ENST00000474297 293 ntBASIC4.48□□□□□ -1.69
CPS1P31327 AC021205.2-201ENST00000480069 347 ntBASIC4.48□□□□□ -1.69
CPS1P31327 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
CPS1P31327 EEF1A1P37-201ENST00000522748 715 ntBASIC4.48□□□□□ -1.69
CPS1P31327 AC010306.1-201ENST00000523223 1117 ntBASIC4.48□□□□□ -1.69
CPS1P31327 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.48□□□□□ -1.69
CPS1P31327 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.48□□□□□ -1.69
CPS1P31327 AL359715.5-201ENST00000623431 443 ntBASIC4.48□□□□□ -1.69
CPS1P31327 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CPS1P31327 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.48□□□□□ -1.69
CPS1P31327 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CPS1P31327 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.48□□□□□ -1.69
CPS1P31327 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CPS1P31327 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
CPS1P31327 ELF2P3-201ENST00000445099 1506 ntBASIC4.47□□□□□ -1.69
CPS1P31327 AL672167.1-206ENST00000356293 943 ntBASIC4.47□□□□□ -1.69
CPS1P31327 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.47□□□□□ -1.69
CPS1P31327 NECAP1P2-201ENST00000455668 727 ntBASIC4.47□□□□□ -1.69
CPS1P31327 SYT14P1-201ENST00000481459 721 ntBASIC4.47□□□□□ -1.69
CPS1P31327 ATP5F1P5-201ENST00000526403 760 ntBASIC4.47□□□□□ -1.69
CPS1P31327 AP000916.1-201ENST00000533869 835 ntBASIC4.47□□□□□ -1.69
CPS1P31327 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.47□□□□□ -1.69
CPS1P31327 AC015849.2-201ENST00000605738 409 ntBASIC4.47□□□□□ -1.69
CPS1P31327 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CPS1P31327 AC097634.1-201ENST00000604491 2467 ntBASIC4.47□□□□□ -1.69
CPS1P31327 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CPS1P31327 MIR887-201ENST00000401258 79 ntBASIC4.46□□□□□ -1.69
CPS1P31327 MYL8P-204ENST00000431574 518 ntBASIC4.46□□□□□ -1.69
CPS1P31327 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC4.46□□□□□ -1.69
CPS1P31327 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.46□□□□□ -1.69
CPS1P31327 ELOCP23-201ENST00000452014 332 ntBASIC4.46□□□□□ -1.69
CPS1P31327 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC4.46□□□□□ -1.69
CPS1P31327 AC087312.1-201ENST00000471411 480 ntBASIC4.46□□□□□ -1.69
CPS1P31327 AC090543.2-201ENST00000483963 348 ntBASIC4.46□□□□□ -1.69
CPS1P31327 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.46□□□□□ -1.69
CPS1P31327 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.46□□□□□ -1.69
CPS1P31327 AP000859.1-201ENST00000525536 307 ntBASIC4.46□□□□□ -1.69
CPS1P31327 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.46□□□□□ -1.69
CPS1P31327 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.46□□□□□ -1.69
CPS1P31327 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.46□□□□□ -1.69
CPS1P31327 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC4.46□□□□□ -1.69
CPS1P31327 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
CPS1P31327 AL356489.2-201ENST00000566968 3528 ntBASIC4.46□□□□□ -1.7
CPS1P31327 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.46□□□□□ -1.7
CPS1P31327 RNU1-89P-201ENST00000384592 164 ntBASIC4.46□□□□□ -1.7
CPS1P31327 SEPT7P2-202ENST00000398921 823 ntBASIC4.46□□□□□ -1.7
CPS1P31327 AL136116.1-201ENST00000403591 381 ntBASIC4.46□□□□□ -1.7
CPS1P31327 AL645937.1-202ENST00000421799 937 ntBASIC4.46□□□□□ -1.7
CPS1P31327 AC063976.3-201ENST00000426849 329 ntBASIC4.46□□□□□ -1.7
CPS1P31327 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CPS1P31327 AC007563.3-201ENST00000433233 371 ntBASIC4.46□□□□□ -1.7
CPS1P31327 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC4.46□□□□□ -1.7
CPS1P31327 AC009097.3-201ENST00000563557 1018 ntBASIC4.46□□□□□ -1.7
CPS1P31327 AC015917.1-201ENST00000579654 510 ntBASIC4.46□□□□□ -1.7
CPS1P31327 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.46□□□□□ -1.7
CPS1P31327 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
CPS1P31327 AL049780.3-201ENST00000624612 1583 ntBASIC4.45□□□□□ -1.7
CPS1P31327 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC4.45□□□□□ -1.7
CPS1P31327 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CPS1P31327 RN7SKP56-201ENST00000410513 331 ntBASIC4.45□□□□□ -1.7
CPS1P31327 RPL21P40-201ENST00000428586 483 ntBASIC4.45□□□□□ -1.7
CPS1P31327 AL603825.1-201ENST00000438481 80 ntBASIC4.45□□□□□ -1.7
CPS1P31327 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.45□□□□□ -1.7
CPS1P31327 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC4.45□□□□□ -1.7
CPS1P31327 HIGD1AP13-201ENST00000509878 289 ntBASIC4.45□□□□□ -1.7
CPS1P31327 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.45□□□□□ -1.7
CPS1P31327 AC007619.2-201ENST00000605743 379 ntBASIC4.45□□□□□ -1.7
CPS1P31327 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.45□□□□□ -1.7
CPS1P31327 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.45□□□□□ -1.7
CPS1P31327 AC099506.2-201ENST00000623074 221 ntBASIC4.45□□□□□ -1.7
CPS1P31327 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CPS1P31327 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CPS1P31327 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CPS1P31327 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms