Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.38□□□□□ -1.71
HOXC13P31276 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.38□□□□□ -1.71
HOXC13P31276 ZNF192P1-203ENST00000565888 810 ntBASIC4.38□□□□□ -1.71
HOXC13P31276 CYP2C60P-201ENST00000566088 139 ntBASIC4.38□□□□□ -1.71
HOXC13P31276 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.38□□□□□ -1.71
HOXC13P31276 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.38□□□□□ -1.71
HOXC13P31276 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HOXC13P31276 AC006023.2-201ENST00000609916 167 ntBASIC4.38□□□□□ -1.71
HOXC13P31276 AC005156.1-201ENST00000613371 573 ntBASIC4.38□□□□□ -1.71
HOXC13P31276 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HOXC13P31276 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HOXC13P31276 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
HOXC13P31276 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.38□□□□□ -1.71
HOXC13P31276 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
HOXC13P31276 AC097504.1-201ENST00000515103 2415 ntBASIC4.37□□□□□ -1.71
HOXC13P31276 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HOXC13P31276 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
HOXC13P31276 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.37□□□□□ -1.71
HOXC13P31276 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.37□□□□□ -1.71
HOXC13P31276 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HOXC13P31276 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXC13P31276 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.37□□□□□ -1.71
HOXC13P31276 SNORA11.1-201ENST00000408133 129 ntBASIC4.37□□□□□ -1.71
HOXC13P31276 RN7SKP159-201ENST00000410657 292 ntBASIC4.37□□□□□ -1.71
HOXC13P31276 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXC13P31276 AL161631.1-201ENST00000417933 486 ntBASIC4.37□□□□□ -1.71
HOXC13P31276 MTCO2P17-201ENST00000424336 677 ntBASIC4.37□□□□□ -1.71
HOXC13P31276 HMGN3P1-201ENST00000453847 193 ntBASIC4.37□□□□□ -1.71
HOXC13P31276 CDC42P1-201ENST00000456658 548 ntBASIC4.37□□□□□ -1.71
HOXC13P31276 RNA5SP246-201ENST00000458909 119 ntBASIC4.37□□□□□ -1.71
HOXC13P31276 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.37□□□□□ -1.71
HOXC13P31276 NCOR1P1-202ENST00000486162 291 ntBASIC4.37□□□□□ -1.71
HOXC13P31276 NAMPTP2-201ENST00000505629 1115 ntBASIC4.37□□□□□ -1.71
HOXC13P31276 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.37□□□□□ -1.71
HOXC13P31276 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HOXC13P31276 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC4.37□□□□□ -1.71
HOXC13P31276 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.37□□□□□ -1.71
HOXC13P31276 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXC13P31276 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.37□□□□□ -1.71
HOXC13P31276 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC4.37□□□□□ -1.71
HOXC13P31276 AC105233.3-201ENST00000531125 744 ntBASIC4.37□□□□□ -1.71
HOXC13P31276 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HOXC13P31276 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXC13P31276 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXC13P31276 CYB5AP5-201ENST00000549779 389 ntBASIC4.37□□□□□ -1.71
HOXC13P31276 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXC13P31276 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXC13P31276 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.37□□□□□ -1.71
HOXC13P31276 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC4.37□□□□□ -1.71
HOXC13P31276 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.37□□□□□ -1.71
HOXC13P31276 YWHAQP7-201ENST00000603536 658 ntBASIC4.37□□□□□ -1.71
HOXC13P31276 AC244100.1-202ENST00000621554 382 ntBASIC4.37□□□□□ -1.71
HOXC13P31276 AC012442.3-202ENST00000636742 206 ntBASIC4.37□□□□□ -1.71
HOXC13P31276 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.37□□□□□ -1.71
HOXC13P31276 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.37□□□□□ -1.71
HOXC13P31276 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HOXC13P31276 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HOXC13P31276 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
HOXC13P31276 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
HOXC13P31276 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HOXC13P31276 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HOXC13P31276 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
HOXC13P31276 RNU1-108P-201ENST00000362556 161 ntBASIC4.36□□□□□ -1.71
HOXC13P31276 SFR1P1-201ENST00000403720 688 ntBASIC4.36□□□□□ -1.71
HOXC13P31276 HSPE1P26-201ENST00000405341 275 ntBASIC4.36□□□□□ -1.71
HOXC13P31276 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.36□□□□□ -1.71
HOXC13P31276 UBE2V1P9-201ENST00000414760 368 ntBASIC4.36□□□□□ -1.71
HOXC13P31276 RPS23P10-201ENST00000416185 486 ntBASIC4.36□□□□□ -1.71
HOXC13P31276 AC244098.2-201ENST00000422068 99 ntBASIC4.36□□□□□ -1.71
HOXC13P31276 AC005517.2-201ENST00000424673 553 ntBASIC4.36□□□□□ -1.71
HOXC13P31276 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.36□□□□□ -1.71
HOXC13P31276 NPM1P49-201ENST00000448027 714 ntBASIC4.36□□□□□ -1.71
HOXC13P31276 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.36□□□□□ -1.71
HOXC13P31276 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.36□□□□□ -1.71
HOXC13P31276 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.36□□□□□ -1.71
HOXC13P31276 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.36□□□□□ -1.71
HOXC13P31276 ANP32BP2-201ENST00000454525 545 ntBASIC4.36□□□□□ -1.71
HOXC13P31276 AC091959.2-201ENST00000477363 321 ntBASIC4.36□□□□□ -1.71
HOXC13P31276 UBE2V1P12-201ENST00000503954 474 ntBASIC4.36□□□□□ -1.71
HOXC13P31276 AC093801.2-201ENST00000503966 1050 ntBASIC4.36□□□□□ -1.71
HOXC13P31276 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
HOXC13P31276 STMN1P2-201ENST00000508435 439 ntBASIC4.36□□□□□ -1.71
HOXC13P31276 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HOXC13P31276 KCTD9P2-201ENST00000512203 1013 ntBASIC4.36□□□□□ -1.71
HOXC13P31276 AC026726.1-201ENST00000512859 601 ntBASIC4.36□□□□□ -1.71
HOXC13P31276 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.36□□□□□ -1.71
HOXC13P31276 IGJP1-201ENST00000522682 475 ntBASIC4.36□□□□□ -1.71
HOXC13P31276 AF279873.1-201ENST00000523393 313 ntBASIC4.36□□□□□ -1.71
HOXC13P31276 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.36□□□□□ -1.71
HOXC13P31276 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HOXC13P31276 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HOXC13P31276 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.36□□□□□ -1.71
HOXC13P31276 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.36□□□□□ -1.71
HOXC13P31276 AC087894.1-201ENST00000538359 518 ntBASIC4.36□□□□□ -1.71
HOXC13P31276 AC022069.1-201ENST00000582910 658 ntBASIC4.36□□□□□ -1.71
HOXC13P31276 AC053481.4-201ENST00000583164 216 ntBASIC4.36□□□□□ -1.71
HOXC13P31276 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.36□□□□□ -1.71
HOXC13P31276 VN1R87P-201ENST00000596706 487 ntBASIC4.36□□□□□ -1.71
HOXC13P31276 AC012468.1-201ENST00000604888 430 ntBASIC4.36□□□□□ -1.71
HOXC13P31276 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms