Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC3.63□□□□□ -1.83
COL4A5P29400 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
COL4A5P29400 MIR448-201ENST00000362131 111 ntBASIC3.62□□□□□ -1.83
COL4A5P29400 MYL8P-204ENST00000431574 518 ntBASIC3.62□□□□□ -1.83
COL4A5P29400 SAGE4P-201ENST00000442271 3381 ntBASIC3.62□□□□□ -1.83
COL4A5P29400 RPS12P18-201ENST00000442381 270 ntBASIC3.62□□□□□ -1.83
COL4A5P29400 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.62□□□□□ -1.83
COL4A5P29400 AP000942.1-201ENST00000463969 747 ntBASIC3.62□□□□□ -1.83
COL4A5P29400 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC3.62□□□□□ -1.83
COL4A5P29400 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
COL4A5P29400 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC3.62□□□□□ -1.83
COL4A5P29400 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.62□□□□□ -1.83
COL4A5P29400 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.62□□□□□ -1.83
COL4A5P29400 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.62□□□□□ -1.83
COL4A5P29400 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
COL4A5P29400 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.62□□□□□ -1.83
COL4A5P29400 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.62□□□□□ -1.83
COL4A5P29400 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
COL4A5P29400 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.62□□□□□ -1.83
COL4A5P29400 AL445529.1-201ENST00000398713 389 ntBASIC3.62□□□□□ -1.83
COL4A5P29400 AC019097.1-201ENST00000424783 735 ntBASIC3.62□□□□□ -1.83
COL4A5P29400 AC128713.1-201ENST00000471495 306 ntBASIC3.62□□□□□ -1.83
COL4A5P29400 YWHAEP4-201ENST00000505390 198 ntBASIC3.62□□□□□ -1.83
COL4A5P29400 RNU1-143P-201ENST00000516296 146 ntBASIC3.62□□□□□ -1.83
COL4A5P29400 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.62□□□□□ -1.83
COL4A5P29400 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.62□□□□□ -1.83
COL4A5P29400 DPRXP4-201ENST00000578053 568 ntBASIC3.62□□□□□ -1.83
COL4A5P29400 U1.23-201ENST00000610293 146 ntBASIC3.62□□□□□ -1.83
COL4A5P29400 RNU1-68P-201ENST00000615382 146 ntBASIC3.62□□□□□ -1.83
COL4A5P29400 U1.39-201ENST00000621562 146 ntBASIC3.62□□□□□ -1.83
COL4A5P29400 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
COL4A5P29400 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
COL4A5P29400 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
COL4A5P29400 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
COL4A5P29400 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC3.61□□□□□ -1.83
COL4A5P29400 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC3.61□□□□□ -1.83
COL4A5P29400 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
COL4A5P29400 RPS4XP5-202ENST00000449995 1334 ntBASIC3.61□□□□□ -1.83
COL4A5P29400 AL049780.3-201ENST00000624612 1583 ntBASIC3.61□□□□□ -1.83
COL4A5P29400 AC015813.6-201ENST00000624409 5808 ntBASIC3.61□□□□□ -1.83
COL4A5P29400 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
COL4A5P29400 AP002088.1-201ENST00000382740 395 ntBASIC3.61□□□□□ -1.83
COL4A5P29400 MIR34A-201ENST00000385130 110 ntBASIC3.61□□□□□ -1.83
COL4A5P29400 REREP1Y-201ENST00000422655 198 ntBASIC3.61□□□□□ -1.83
COL4A5P29400 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC3.61□□□□□ -1.83
COL4A5P29400 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.61□□□□□ -1.83
COL4A5P29400 FTH1P1-201ENST00000437933 532 ntBASIC3.61□□□□□ -1.83
COL4A5P29400 REREP2Y-201ENST00000439103 200 ntBASIC3.61□□□□□ -1.83
COL4A5P29400 RPL7P36-201ENST00000444633 681 ntBASIC3.61□□□□□ -1.83
COL4A5P29400 RPL12P26-201ENST00000452430 487 ntBASIC3.61□□□□□ -1.83
COL4A5P29400 AL136097.1-201ENST00000456945 913 ntBASIC3.61□□□□□ -1.83
COL4A5P29400 RPL31P13-201ENST00000484151 370 ntBASIC3.61□□□□□ -1.83
COL4A5P29400 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC3.61□□□□□ -1.83
COL4A5P29400 AC083906.5-201ENST00000503722 328 ntBASIC3.61□□□□□ -1.83
COL4A5P29400 AC114781.4-201ENST00000513707 639 ntBASIC3.61□□□□□ -1.83
COL4A5P29400 OR5G4P-201ENST00000525251 760 ntBASIC3.61□□□□□ -1.83
COL4A5P29400 AP002812.4-201ENST00000532139 286 ntBASIC3.61□□□□□ -1.83
COL4A5P29400 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.61□□□□□ -1.83
COL4A5P29400 AL049874.4-201ENST00000557593 255 ntBASIC3.61□□□□□ -1.83
COL4A5P29400 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
COL4A5P29400 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC3.61□□□□□ -1.83
COL4A5P29400 OR1AB1P-201ENST00000585564 761 ntBASIC3.61□□□□□ -1.83
COL4A5P29400 AC244517.3-201ENST00000616254 1235 ntBASIC3.61□□□□□ -1.83
COL4A5P29400 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.61□□□□□ -1.83
COL4A5P29400 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.61□□□□□ -1.83
COL4A5P29400 AC010149.2-201ENST00000637608 315 ntBASIC3.61□□□□□ -1.83
COL4A5P29400 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
COL4A5P29400 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
COL4A5P29400 ASNSP1-201ENST00000518311 1939 ntBASIC3.6□□□□□ -1.83
COL4A5P29400 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.6□□□□□ -1.83
COL4A5P29400 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
COL4A5P29400 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
COL4A5P29400 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.6□□□□□ -1.83
COL4A5P29400 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
COL4A5P29400 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.6□□□□□ -1.83
COL4A5P29400 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
COL4A5P29400 AL445528.1-201ENST00000426330 420 ntBASIC3.6□□□□□ -1.83
COL4A5P29400 TXNP1-201ENST00000441872 371 ntBASIC3.6□□□□□ -1.83
COL4A5P29400 RPS3P1-201ENST00000456781 192 ntBASIC3.6□□□□□ -1.83
COL4A5P29400 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.6□□□□□ -1.83
COL4A5P29400 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
COL4A5P29400 AC106734.1-201ENST00000568646 663 ntBASIC3.6□□□□□ -1.83
COL4A5P29400 AC138761.3-201ENST00000579993 334 ntBASIC3.6□□□□□ -1.83
COL4A5P29400 PLCE1P1-201ENST00000622094 305 ntBASIC3.6□□□□□ -1.83
COL4A5P29400 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
COL4A5P29400 KPNA2P2-201ENST00000419546 1489 ntBASIC3.6□□□□□ -1.83
COL4A5P29400 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
COL4A5P29400 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
COL4A5P29400 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
COL4A5P29400 THAP12P8-201ENST00000447914 2115 ntBASIC3.59□□□□□ -1.83
COL4A5P29400 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.59□□□□□ -1.83
COL4A5P29400 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC3.59□□□□□ -1.83
COL4A5P29400 HMGB3P11-201ENST00000440127 604 ntBASIC3.59□□□□□ -1.83
COL4A5P29400 AC073587.1-201ENST00000447093 876 ntBASIC3.59□□□□□ -1.83
COL4A5P29400 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.59□□□□□ -1.83
COL4A5P29400 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.59□□□□□ -1.83
COL4A5P29400 MTCO3P16-201ENST00000454456 754 ntBASIC3.59□□□□□ -1.83
COL4A5P29400 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.59□□□□□ -1.83
COL4A5P29400 SNORD109B-201ENST00000458961 67 ntBASIC3.59□□□□□ -1.83
COL4A5P29400 SNORD109A-201ENST00000459128 67 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms