Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 RNA5SP28-201ENST00000363841 119 ntBASIC4.57□□□□□ -1.68
EPHA3P29320 RNU6-1119P-201ENST00000384349 108 ntBASIC4.57□□□□□ -1.68
EPHA3P29320 AL590762.2-201ENST00000395798 571 ntBASIC4.57□□□□□ -1.68
EPHA3P29320 HMGB1P11-201ENST00000413899 637 ntBASIC4.57□□□□□ -1.68
EPHA3P29320 AL139128.1-201ENST00000413921 941 ntBASIC4.57□□□□□ -1.68
EPHA3P29320 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC4.57□□□□□ -1.68
EPHA3P29320 AC004690.1-201ENST00000418216 328 ntBASIC4.57□□□□□ -1.68
EPHA3P29320 RPL7P30-201ENST00000420888 709 ntBASIC4.57□□□□□ -1.68
EPHA3P29320 OR5BE1P-201ENST00000425977 939 ntBASIC4.57□□□□□ -1.68
EPHA3P29320 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
EPHA3P29320 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.57□□□□□ -1.68
EPHA3P29320 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.57□□□□□ -1.68
EPHA3P29320 AC093414.1-201ENST00000434712 514 ntBASIC4.57□□□□□ -1.68
EPHA3P29320 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC4.57□□□□□ -1.68
EPHA3P29320 CDC27P1-201ENST00000445384 715 ntBASIC4.57□□□□□ -1.68
EPHA3P29320 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.57□□□□□ -1.68
EPHA3P29320 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
EPHA3P29320 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.57□□□□□ -1.68
EPHA3P29320 RPS15AP17-201ENST00000470598 390 ntBASIC4.57□□□□□ -1.68
EPHA3P29320 OR52A4P-201ENST00000472867 958 ntBASIC4.57□□□□□ -1.68
EPHA3P29320 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.57□□□□□ -1.68
EPHA3P29320 SNRPCP2-201ENST00000504370 475 ntBASIC4.57□□□□□ -1.68
EPHA3P29320 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.57□□□□□ -1.68
EPHA3P29320 AC113430.1-201ENST00000506872 718 ntBASIC4.57□□□□□ -1.68
EPHA3P29320 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.57□□□□□ -1.68
EPHA3P29320 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.57□□□□□ -1.68
EPHA3P29320 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.57□□□□□ -1.68
EPHA3P29320 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.57□□□□□ -1.68
EPHA3P29320 AC008127.2-201ENST00000549925 1075 ntBASIC4.57□□□□□ -1.68
EPHA3P29320 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.57□□□□□ -1.68
EPHA3P29320 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.57□□□□□ -1.68
EPHA3P29320 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.57□□□□□ -1.68
EPHA3P29320 AL133457.1-201ENST00000564251 987 ntBASIC4.57□□□□□ -1.68
EPHA3P29320 AC141257.3-201ENST00000572906 215 ntBASIC4.57□□□□□ -1.68
EPHA3P29320 RN7SL802P-201ENST00000577858 299 ntBASIC4.57□□□□□ -1.68
EPHA3P29320 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.57□□□□□ -1.68
EPHA3P29320 SLC25A36P1-201ENST00000590111 465 ntBASIC4.57□□□□□ -1.68
EPHA3P29320 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.57□□□□□ -1.68
EPHA3P29320 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.57□□□□□ -1.68
EPHA3P29320 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
EPHA3P29320 AC005191.1-201ENST00000603950 358 ntBASIC4.57□□□□□ -1.68
EPHA3P29320 SUMO2P15-201ENST00000604285 278 ntBASIC4.57□□□□□ -1.68
EPHA3P29320 AC005084.1-201ENST00000605160 304 ntBASIC4.57□□□□□ -1.68
EPHA3P29320 AC103710.4-201ENST00000609301 899 ntBASIC4.57□□□□□ -1.68
EPHA3P29320 AL356121.2-201ENST00000624715 780 ntBASIC4.57□□□□□ -1.68
EPHA3P29320 OR5BE1P-202ENST00000641168 1176 ntBASIC4.57□□□□□ -1.68
EPHA3P29320 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
EPHA3P29320 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
EPHA3P29320 OR51H2P-202ENST00000641424 3046 ntBASIC4.57□□□□□ -1.68
EPHA3P29320 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
EPHA3P29320 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
EPHA3P29320 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.57□□□□□ -1.68
EPHA3P29320 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
EPHA3P29320 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
EPHA3P29320 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
EPHA3P29320 SAMMSON-213ENST00000641336 1521 ntBASIC4.56□□□□□ -1.68
EPHA3P29320 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.56□□□□□ -1.68
EPHA3P29320 AC009229.4-201ENST00000623854 1947 ntBASIC4.56□□□□□ -1.68
EPHA3P29320 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
EPHA3P29320 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
EPHA3P29320 MTND4P26-201ENST00000415971 1359 ntBASIC4.56□□□□□ -1.68
EPHA3P29320 MTND4P4-201ENST00000439033 1366 ntBASIC4.56□□□□□ -1.68
EPHA3P29320 MTND5P29-201ENST00000458676 1807 ntBASIC4.56□□□□□ -1.68
EPHA3P29320 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
EPHA3P29320 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
EPHA3P29320 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.56□□□□□ -1.68
EPHA3P29320 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.56□□□□□ -1.68
EPHA3P29320 OR10J6P-201ENST00000289731 930 ntBASIC4.56□□□□□ -1.68
EPHA3P29320 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
EPHA3P29320 RNU5F-6P-201ENST00000362979 116 ntBASIC4.56□□□□□ -1.68
EPHA3P29320 Y_RNA.517-201ENST00000384551 106 ntBASIC4.56□□□□□ -1.68
EPHA3P29320 ZNF603P-201ENST00000405613 487 ntBASIC4.56□□□□□ -1.68
EPHA3P29320 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.56□□□□□ -1.68
EPHA3P29320 RNU2-16P-201ENST00000410712 136 ntBASIC4.56□□□□□ -1.68
EPHA3P29320 VDAC1P9-201ENST00000412766 841 ntBASIC4.56□□□□□ -1.68
EPHA3P29320 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.56□□□□□ -1.68
EPHA3P29320 UBTFL3-201ENST00000418934 1024 ntBASIC4.56□□□□□ -1.68
EPHA3P29320 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.56□□□□□ -1.68
EPHA3P29320 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
EPHA3P29320 AC234779.1-201ENST00000425910 285 ntBASIC4.56□□□□□ -1.68
EPHA3P29320 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.56□□□□□ -1.68
EPHA3P29320 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
EPHA3P29320 AL512649.1-201ENST00000428997 581 ntBASIC4.56□□□□□ -1.68
EPHA3P29320 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.56□□□□□ -1.68
EPHA3P29320 MTND1P28-201ENST00000435623 950 ntBASIC4.56□□□□□ -1.68
EPHA3P29320 AC105402.2-201ENST00000438503 358 ntBASIC4.56□□□□□ -1.68
EPHA3P29320 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.56□□□□□ -1.68
EPHA3P29320 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.56□□□□□ -1.68
EPHA3P29320 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.56□□□□□ -1.68
EPHA3P29320 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.56□□□□□ -1.68
EPHA3P29320 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
EPHA3P29320 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.56□□□□□ -1.68
EPHA3P29320 DNAJC19P1-201ENST00000455312 319 ntBASIC4.56□□□□□ -1.68
EPHA3P29320 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.56□□□□□ -1.68
EPHA3P29320 RNA5SP269-201ENST00000459032 137 ntBASIC4.56□□□□□ -1.68
EPHA3P29320 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.56□□□□□ -1.68
EPHA3P29320 AP000893.1-201ENST00000474462 794 ntBASIC4.56□□□□□ -1.68
EPHA3P29320 UBTFL6-201ENST00000477929 1024 ntBASIC4.56□□□□□ -1.68
EPHA3P29320 RNA5SP446-201ENST00000515955 82 ntBASIC4.56□□□□□ -1.68
EPHA3P29320 RNA5SP216-201ENST00000516111 123 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 138.2 ms