Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC4.79□□□□□ -1.64
CD40P25942 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.79□□□□□ -1.64
CD40P25942 PPP1R11P1-201ENST00000486095 376 ntBASIC4.79□□□□□ -1.64
CD40P25942 AC079382.1-201ENST00000493346 557 ntBASIC4.79□□□□□ -1.64
CD40P25942 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.79□□□□□ -1.64
CD40P25942 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.79□□□□□ -1.64
CD40P25942 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.79□□□□□ -1.64
CD40P25942 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.79□□□□□ -1.64
CD40P25942 AC100784.1-201ENST00000522790 310 ntBASIC4.79□□□□□ -1.64
CD40P25942 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.79□□□□□ -1.64
CD40P25942 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.79□□□□□ -1.64
CD40P25942 AP003034.1-201ENST00000534621 422 ntBASIC4.79□□□□□ -1.64
CD40P25942 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.79□□□□□ -1.64
CD40P25942 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC4.79□□□□□ -1.64
CD40P25942 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4.79□□□□□ -1.64
CD40P25942 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.79□□□□□ -1.64
CD40P25942 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.79□□□□□ -1.64
CD40P25942 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.79□□□□□ -1.64
CD40P25942 MIR3146-201ENST00000580367 79 ntBASIC4.79□□□□□ -1.64
CD40P25942 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.79□□□□□ -1.64
CD40P25942 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.79□□□□□ -1.64
CD40P25942 AL451044.1-201ENST00000604867 238 ntBASIC4.79□□□□□ -1.64
CD40P25942 AC008536.2-201ENST00000607284 349 ntBASIC4.79□□□□□ -1.64
CD40P25942 AC000068.2-201ENST00000608816 460 ntBASIC4.79□□□□□ -1.64
CD40P25942 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CD40P25942 AC092794.2-201ENST00000620933 563 ntBASIC4.79□□□□□ -1.64
CD40P25942 AL159972.1-201ENST00000625150 448 ntBASIC4.79□□□□□ -1.64
CD40P25942 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.79□□□□□ -1.64
CD40P25942 MIR1321-201ENST00000637766 79 ntBASIC4.79□□□□□ -1.64
CD40P25942 ZNF402P-201ENST00000404435 3100 ntBASIC4.79□□□□□ -1.64
CD40P25942 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CD40P25942 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC4.79□□□□□ -1.64
CD40P25942 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC4.79□□□□□ -1.64
CD40P25942 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CD40P25942 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CD40P25942 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CD40P25942 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CD40P25942 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.79□□□□□ -1.64
CD40P25942 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.79□□□□□ -1.64
CD40P25942 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CD40P25942 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CD40P25942 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CD40P25942 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CD40P25942 AL360270.2-201ENST00000562952 5985 ntBASIC4.78□□□□□ -1.64
CD40P25942 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CD40P25942 AC009902.3-201ENST00000606235 2172 ntBASIC4.78□□□□□ -1.64
CD40P25942 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.78□□□□□ -1.64
CD40P25942 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC4.78□□□□□ -1.64
CD40P25942 AC144833.1-201ENST00000567953 4089 ntBASIC4.78□□□□□ -1.64
CD40P25942 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CD40P25942 RNA5SP326-201ENST00000363209 110 ntBASIC4.78□□□□□ -1.64
CD40P25942 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CD40P25942 RNU6-114P-201ENST00000384704 105 ntBASIC4.78□□□□□ -1.64
CD40P25942 MT-TC-201ENST00000387405 66 ntBASIC4.78□□□□□ -1.64
CD40P25942 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CD40P25942 RN7SKP285-201ENST00000410137 318 ntBASIC4.78□□□□□ -1.64
CD40P25942 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.78□□□□□ -1.64
CD40P25942 AC009237.5-201ENST00000414271 501 ntBASIC4.78□□□□□ -1.64
CD40P25942 METTL15P3-201ENST00000415522 1221 ntBASIC4.78□□□□□ -1.64
CD40P25942 ELOCP4-201ENST00000420090 333 ntBASIC4.78□□□□□ -1.64
CD40P25942 AC007161.1-204ENST00000423039 460 ntBASIC4.78□□□□□ -1.64
CD40P25942 AC092651.1-201ENST00000426110 312 ntBASIC4.78□□□□□ -1.64
CD40P25942 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.78□□□□□ -1.64
CD40P25942 AL136231.1-201ENST00000429407 730 ntBASIC4.78□□□□□ -1.64
CD40P25942 EZH2P1-201ENST00000431167 291 ntBASIC4.78□□□□□ -1.64
CD40P25942 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.78□□□□□ -1.64
CD40P25942 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CD40P25942 AL121601.2-201ENST00000438019 707 ntBASIC4.78□□□□□ -1.64
CD40P25942 BX679664.2-201ENST00000439282 283 ntBASIC4.78□□□□□ -1.64
CD40P25942 MTCO3P18-201ENST00000440206 761 ntBASIC4.78□□□□□ -1.64
CD40P25942 Z95327.1-201ENST00000446082 482 ntBASIC4.78□□□□□ -1.64
CD40P25942 RPL23AP20-201ENST00000447965 421 ntBASIC4.78□□□□□ -1.64
CD40P25942 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.78□□□□□ -1.64
CD40P25942 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.78□□□□□ -1.64
CD40P25942 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.78□□□□□ -1.64
CD40P25942 COPS8P2-201ENST00000473228 627 ntBASIC4.78□□□□□ -1.64
CD40P25942 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.78□□□□□ -1.64
CD40P25942 AC108475.1-201ENST00000507880 950 ntBASIC4.78□□□□□ -1.64
CD40P25942 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.78□□□□□ -1.64
CD40P25942 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.78□□□□□ -1.64
CD40P25942 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.78□□□□□ -1.64
CD40P25942 RNA5SP34-201ENST00000516887 130 ntBASIC4.78□□□□□ -1.64
CD40P25942 RNU6-1220P-201ENST00000517126 108 ntBASIC4.78□□□□□ -1.64
CD40P25942 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.78□□□□□ -1.64
CD40P25942 AL512310.1-201ENST00000548639 172 ntBASIC4.78□□□□□ -1.64
CD40P25942 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.78□□□□□ -1.64
CD40P25942 AC009117.1-201ENST00000563948 554 ntBASIC4.78□□□□□ -1.64
CD40P25942 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.78□□□□□ -1.64
CD40P25942 MIR1269B-201ENST00000580405 75 ntBASIC4.78□□□□□ -1.64
CD40P25942 AC060780.2-201ENST00000589047 198 ntBASIC4.78□□□□□ -1.64
CD40P25942 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.78□□□□□ -1.64
CD40P25942 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.78□□□□□ -1.64
CD40P25942 AC011451.2-201ENST00000604303 598 ntBASIC4.78□□□□□ -1.64
CD40P25942 AC069234.5-201ENST00000611056 416 ntBASIC4.78□□□□□ -1.64
CD40P25942 AC006329.2-201ENST00000611491 394 ntBASIC4.78□□□□□ -1.64
CD40P25942 AL122125.1-201ENST00000616999 600 ntBASIC4.78□□□□□ -1.64
CD40P25942 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.78□□□□□ -1.64
CD40P25942 DUXAP9-208ENST00000622815 614 ntBASIC4.78□□□□□ -1.64
CD40P25942 AC040168.1-201ENST00000623594 991 ntBASIC4.78□□□□□ -1.64
CD40P25942 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms