Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
ATF1P18846 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.05□□□□□ -1.92
ATF1P18846 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
ATF1P18846 SNORA70.2-201ENST00000364506 135 ntBASIC3.05□□□□□ -1.92
ATF1P18846 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.05□□□□□ -1.92
ATF1P18846 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.05□□□□□ -1.92
ATF1P18846 MIR7-1-201ENST00000384871 110 ntBASIC3.05□□□□□ -1.92
ATF1P18846 DNAJC19P6-201ENST00000401853 280 ntBASIC3.05□□□□□ -1.92
ATF1P18846 RN7SKP53-201ENST00000411337 315 ntBASIC3.05□□□□□ -1.92
ATF1P18846 TCEA1P4-201ENST00000415066 844 ntBASIC3.05□□□□□ -1.92
ATF1P18846 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.05□□□□□ -1.92
ATF1P18846 CKS1BP5-201ENST00000434172 273 ntBASIC3.05□□□□□ -1.92
ATF1P18846 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.05□□□□□ -1.92
ATF1P18846 RPL23AP22-201ENST00000437556 453 ntBASIC3.05□□□□□ -1.92
ATF1P18846 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.05□□□□□ -1.92
ATF1P18846 XKRYP6-201ENST00000440468 1116 ntBASIC3.05□□□□□ -1.92
ATF1P18846 XKRYP3-201ENST00000442113 1116 ntBASIC3.05□□□□□ -1.92
ATF1P18846 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
ATF1P18846 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.05□□□□□ -1.92
ATF1P18846 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.05□□□□□ -1.92
ATF1P18846 HMGB3P15-201ENST00000507326 574 ntBASIC3.05□□□□□ -1.92
ATF1P18846 AC005921.1-201ENST00000510589 286 ntBASIC3.05□□□□□ -1.92
ATF1P18846 SOD1P3-201ENST00000518682 454 ntBASIC3.05□□□□□ -1.92
ATF1P18846 RANP9-201ENST00000519957 271 ntBASIC3.05□□□□□ -1.92
ATF1P18846 OR5D17P-201ENST00000531492 978 ntBASIC3.05□□□□□ -1.92
ATF1P18846 AP004242.1-201ENST00000533701 349 ntBASIC3.05□□□□□ -1.92
ATF1P18846 OR8L1P-201ENST00000534005 955 ntBASIC3.05□□□□□ -1.92
ATF1P18846 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.05□□□□□ -1.92
ATF1P18846 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.05□□□□□ -1.92
ATF1P18846 PARP1P2-201ENST00000556806 195 ntBASIC3.05□□□□□ -1.92
ATF1P18846 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.05□□□□□ -1.92
ATF1P18846 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.05□□□□□ -1.92
ATF1P18846 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC3.05□□□□□ -1.92
ATF1P18846 MIR5685-201ENST00000579080 79 ntBASIC3.05□□□□□ -1.92
ATF1P18846 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.05□□□□□ -1.92
ATF1P18846 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.05□□□□□ -1.92
ATF1P18846 AC010928.3-201ENST00000587712 541 ntBASIC3.05□□□□□ -1.92
ATF1P18846 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.05□□□□□ -1.92
ATF1P18846 AC006254.3-201ENST00000603353 884 ntBASIC3.05□□□□□ -1.92
ATF1P18846 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC3.05□□□□□ -1.92
ATF1P18846 AC011816.2-201ENST00000607089 556 ntBASIC3.05□□□□□ -1.92
ATF1P18846 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.05□□□□□ -1.92
ATF1P18846 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
ATF1P18846 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
ATF1P18846 MFSD8-233ENST00000641482 4860 ntBASIC3.05□□□□□ -1.92
ATF1P18846 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.05□□□□□ -1.92
ATF1P18846 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
ATF1P18846 MTND5P3-201ENST00000438536 1800 ntBASIC3.05□□□□□ -1.92
ATF1P18846 AC007823.1-201ENST00000569932 1566 ntBASIC3.04□□□□□ -1.92
ATF1P18846 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
ATF1P18846 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
ATF1P18846 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
ATF1P18846 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.04□□□□□ -1.92
ATF1P18846 HSPE1P26-201ENST00000405341 275 ntBASIC3.04□□□□□ -1.92
ATF1P18846 RNU4-74P-201ENST00000411280 161 ntBASIC3.04□□□□□ -1.92
ATF1P18846 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.04□□□□□ -1.92
ATF1P18846 AC126124.2-201ENST00000413542 321 ntBASIC3.04□□□□□ -1.92
ATF1P18846 AC017079.2-201ENST00000416102 485 ntBASIC3.04□□□□□ -1.92
ATF1P18846 MTCO3P4-201ENST00000419236 787 ntBASIC3.04□□□□□ -1.92
ATF1P18846 AC245291.1-201ENST00000419501 328 ntBASIC3.04□□□□□ -1.92
ATF1P18846 RPS15AP40-201ENST00000419621 391 ntBASIC3.04□□□□□ -1.92
ATF1P18846 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.04□□□□□ -1.92
ATF1P18846 RPS29P7-201ENST00000439662 171 ntBASIC3.04□□□□□ -1.92
ATF1P18846 RPL23AP33-201ENST00000442301 452 ntBASIC3.04□□□□□ -1.92
ATF1P18846 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.04□□□□□ -1.92
ATF1P18846 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.04□□□□□ -1.92
ATF1P18846 RPS27P29-201ENST00000463110 252 ntBASIC3.04□□□□□ -1.92
ATF1P18846 AP002884.2-201ENST00000471647 395 ntBASIC3.04□□□□□ -1.92
ATF1P18846 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
ATF1P18846 CEACAMP10-202ENST00000495431 496 ntBASIC3.04□□□□□ -1.92
ATF1P18846 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC3.04□□□□□ -1.92
ATF1P18846 TMEM248P1-201ENST00000510579 951 ntBASIC3.04□□□□□ -1.92
ATF1P18846 AC005351.1-201ENST00000511152 786 ntBASIC3.04□□□□□ -1.92
ATF1P18846 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.04□□□□□ -1.92
ATF1P18846 AC026402.1-201ENST00000513642 170 ntBASIC3.04□□□□□ -1.92
ATF1P18846 SNORA64.4-201ENST00000516632 81 ntBASIC3.04□□□□□ -1.92
ATF1P18846 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.04□□□□□ -1.92
ATF1P18846 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.04□□□□□ -1.92
ATF1P18846 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.04□□□□□ -1.92
ATF1P18846 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.04□□□□□ -1.92
ATF1P18846 HSPE1P5-201ENST00000561489 272 ntBASIC3.04□□□□□ -1.92
ATF1P18846 AC037471.2-201ENST00000564941 598 ntBASIC3.04□□□□□ -1.92
ATF1P18846 AC245128.3-201ENST00000594721 748 ntBASIC3.04□□□□□ -1.92
ATF1P18846 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.04□□□□□ -1.92
ATF1P18846 MIR6748-201ENST00000610433 71 ntBASIC3.04□□□□□ -1.92
ATF1P18846 AC112200.1-201ENST00000625015 234 ntBASIC3.04□□□□□ -1.92
ATF1P18846 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
ATF1P18846 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
ATF1P18846 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.04□□□□□ -1.92
ATF1P18846 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.04□□□□□ -1.92
ATF1P18846 AL133383.2-201ENST00000622958 2336 ntBASIC3.04□□□□□ -1.92
ATF1P18846 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
ATF1P18846 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
ATF1P18846 AL157700.1-201ENST00000561973 1432 ntBASIC3.03□□□□□ -1.92
ATF1P18846 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
ATF1P18846 AC000367.1-201ENST00000452711 1766 ntBASIC3.03□□□□□ -1.92
ATF1P18846 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
ATF1P18846 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
ATF1P18846 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
ATF1P18846 SNORD56.3-201ENST00000363507 71 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms