Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL6A2P12110 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL6A2P12110 AL022322.2-201ENST00000624072 20397 ntBASIC5.24□□□□□ -1.57
COL6A2P12110 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.24□□□□□ -1.57
COL6A2P12110 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
COL6A2P12110 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
COL6A2P12110 UBBP2-201ENST00000376781 231 ntBASIC5.24□□□□□ -1.57
COL6A2P12110 ARF4P3-201ENST00000397387 509 ntBASIC5.24□□□□□ -1.57
COL6A2P12110 DSTNP4-201ENST00000399472 474 ntBASIC5.24□□□□□ -1.57
COL6A2P12110 HSPA8P15-201ENST00000401676 786 ntBASIC5.24□□□□□ -1.57
COL6A2P12110 DHFRP6-201ENST00000401776 268 ntBASIC5.24□□□□□ -1.57
COL6A2P12110 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.24□□□□□ -1.57
COL6A2P12110 MTCO1P17-201ENST00000411522 491 ntBASIC5.24□□□□□ -1.57
COL6A2P12110 AC016769.2-201ENST00000414815 475 ntBASIC5.24□□□□□ -1.57
COL6A2P12110 SPA17P1-201ENST00000416656 452 ntBASIC5.24□□□□□ -1.57
COL6A2P12110 AC245054.1-201ENST00000420944 258 ntBASIC5.24□□□□□ -1.57
COL6A2P12110 RAD23BP1-201ENST00000421404 1227 ntBASIC5.24□□□□□ -1.57
COL6A2P12110 AL590609.2-201ENST00000421430 368 ntBASIC5.24□□□□□ -1.57
COL6A2P12110 AC104837.2-201ENST00000427236 424 ntBASIC5.24□□□□□ -1.57
COL6A2P12110 AL358934.1-201ENST00000432346 324 ntBASIC5.24□□□□□ -1.57
COL6A2P12110 MTCYBP45-201ENST00000435243 565 ntBASIC5.24□□□□□ -1.57
COL6A2P12110 RPL23AP74-201ENST00000437246 471 ntBASIC5.24□□□□□ -1.57
COL6A2P12110 RPL17P49-201ENST00000443728 411 ntBASIC5.24□□□□□ -1.57
COL6A2P12110 RPS26P56-201ENST00000444468 240 ntBASIC5.24□□□□□ -1.57
COL6A2P12110 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.24□□□□□ -1.57
COL6A2P12110 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.24□□□□□ -1.57
COL6A2P12110 DPPA3P1-201ENST00000448050 469 ntBASIC5.24□□□□□ -1.57
COL6A2P12110 AC079448.1-201ENST00000449377 373 ntBASIC5.24□□□□□ -1.57
COL6A2P12110 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.24□□□□□ -1.57
COL6A2P12110 ELOCP23-201ENST00000452014 332 ntBASIC5.24□□□□□ -1.57
COL6A2P12110 RPL10P17-201ENST00000453852 316 ntBASIC5.24□□□□□ -1.57
COL6A2P12110 RN7SL809P-201ENST00000482040 297 ntBASIC5.24□□□□□ -1.57
COL6A2P12110 AC104109.1-201ENST00000498563 436 ntBASIC5.24□□□□□ -1.57
COL6A2P12110 AC006390.1-201ENST00000508068 283 ntBASIC5.24□□□□□ -1.57
COL6A2P12110 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC5.24□□□□□ -1.57
COL6A2P12110 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.24□□□□□ -1.57
COL6A2P12110 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.24□□□□□ -1.57
COL6A2P12110 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC5.24□□□□□ -1.57
COL6A2P12110 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.24□□□□□ -1.57
COL6A2P12110 AL512310.1-201ENST00000548639 172 ntBASIC5.24□□□□□ -1.57
COL6A2P12110 AC008127.2-201ENST00000549925 1075 ntBASIC5.24□□□□□ -1.57
COL6A2P12110 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.24□□□□□ -1.57
COL6A2P12110 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
COL6A2P12110 AC027243.2-201ENST00000602530 724 ntBASIC5.24□□□□□ -1.57
COL6A2P12110 AP003400.5-201ENST00000624827 617 ntBASIC5.24□□□□□ -1.57
COL6A2P12110 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC5.24□□□□□ -1.57
COL6A2P12110 MIR1321-201ENST00000637766 79 ntBASIC5.24□□□□□ -1.57
COL6A2P12110 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
COL6A2P12110 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL6A2P12110 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL6A2P12110 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL6A2P12110 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.24□□□□□ -1.57
COL6A2P12110 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL6A2P12110 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.23□□□□□ -1.57
COL6A2P12110 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
COL6A2P12110 ZNF33BP1-201ENST00000452497 1834 ntBASIC5.23□□□□□ -1.57
COL6A2P12110 AC114947.2-201ENST00000565748 2125 ntBASIC5.23□□□□□ -1.57
COL6A2P12110 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
COL6A2P12110 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.23□□□□□ -1.57
COL6A2P12110 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL6A2P12110 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL6A2P12110 RNU6-178P-201ENST00000384631 104 ntBASIC5.23□□□□□ -1.57
COL6A2P12110 MIR92A2-201ENST00000385299 75 ntBASIC5.23□□□□□ -1.57
COL6A2P12110 MT-TL1-201ENST00000386347 75 ntBASIC5.23□□□□□ -1.57
COL6A2P12110 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.23□□□□□ -1.57
COL6A2P12110 AC009237.5-201ENST00000414271 501 ntBASIC5.23□□□□□ -1.57
COL6A2P12110 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.23□□□□□ -1.57
COL6A2P12110 AC009302.1-201ENST00000417147 390 ntBASIC5.23□□□□□ -1.57
COL6A2P12110 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.23□□□□□ -1.57
COL6A2P12110 USP9YP36-201ENST00000424581 829 ntBASIC5.23□□□□□ -1.57
COL6A2P12110 BTF3P10-201ENST00000433415 495 ntBASIC5.23□□□□□ -1.57
COL6A2P12110 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.23□□□□□ -1.57
COL6A2P12110 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.23□□□□□ -1.57
COL6A2P12110 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC5.23□□□□□ -1.57
COL6A2P12110 EEF1B2P6-201ENST00000445713 673 ntBASIC5.23□□□□□ -1.57
COL6A2P12110 MTCO3P20-201ENST00000454926 688 ntBASIC5.23□□□□□ -1.57
COL6A2P12110 RPL38P1-201ENST00000460914 211 ntBASIC5.23□□□□□ -1.57
COL6A2P12110 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.23□□□□□ -1.57
COL6A2P12110 OR52A4P-201ENST00000472867 958 ntBASIC5.23□□□□□ -1.57
COL6A2P12110 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC5.23□□□□□ -1.57
COL6A2P12110 MTND1P3-201ENST00000484956 952 ntBASIC5.23□□□□□ -1.57
COL6A2P12110 AC013356.1-201ENST00000489027 564 ntBASIC5.23□□□□□ -1.57
COL6A2P12110 RPL7P51-201ENST00000490532 749 ntBASIC5.23□□□□□ -1.57
COL6A2P12110 RN7SL591P-201ENST00000496150 292 ntBASIC5.23□□□□□ -1.57
COL6A2P12110 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.23□□□□□ -1.57
COL6A2P12110 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL6A2P12110 AC018797.3-201ENST00000513388 1241 ntBASIC5.23□□□□□ -1.57
COL6A2P12110 AC006427.1-201ENST00000514359 712 ntBASIC5.23□□□□□ -1.57
COL6A2P12110 AC046134.1-201ENST00000514454 666 ntBASIC5.23□□□□□ -1.57
COL6A2P12110 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
COL6A2P12110 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.23□□□□□ -1.57
COL6A2P12110 AC015720.2-201ENST00000567709 334 ntBASIC5.23□□□□□ -1.57
COL6A2P12110 AC034268.2-201ENST00000571784 482 ntBASIC5.23□□□□□ -1.57
COL6A2P12110 LARP7P2-201ENST00000575306 125 ntBASIC5.23□□□□□ -1.57
COL6A2P12110 AC090312.1-201ENST00000580637 348 ntBASIC5.23□□□□□ -1.57
COL6A2P12110 RN7SL708P-201ENST00000580952 299 ntBASIC5.23□□□□□ -1.57
COL6A2P12110 MIR3614-201ENST00000581261 86 ntBASIC5.23□□□□□ -1.57
COL6A2P12110 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.23□□□□□ -1.57
COL6A2P12110 MAGOH2P-202ENST00000584384 429 ntBASIC5.23□□□□□ -1.57
COL6A2P12110 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms