Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.61□□□□□ -1.83
APOEP02649 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.61□□□□□ -1.83
APOEP02649 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.61□□□□□ -1.83
APOEP02649 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.61□□□□□ -1.83
APOEP02649 AC022884.3-201ENST00000579571 248 ntBASIC3.61□□□□□ -1.83
APOEP02649 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.61□□□□□ -1.83
APOEP02649 AC011492.1-201ENST00000600023 315 ntBASIC3.61□□□□□ -1.83
APOEP02649 AC006557.5-201ENST00000603126 811 ntBASIC3.61□□□□□ -1.83
APOEP02649 AL354950.1-201ENST00000614150 568 ntBASIC3.61□□□□□ -1.83
APOEP02649 AC012314.7-201ENST00000619693 93 ntBASIC3.61□□□□□ -1.83
APOEP02649 AC015967.1-201ENST00000619893 476 ntBASIC3.61□□□□□ -1.83
APOEP02649 AP003072.4-201ENST00000624580 310 ntBASIC3.61□□□□□ -1.83
APOEP02649 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.61□□□□□ -1.83
APOEP02649 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.61□□□□□ -1.83
APOEP02649 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
APOEP02649 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
APOEP02649 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
APOEP02649 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
APOEP02649 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.6□□□□□ -1.83
APOEP02649 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.6□□□□□ -1.83
APOEP02649 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
APOEP02649 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.6□□□□□ -1.83
APOEP02649 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
APOEP02649 RNU4-35P-201ENST00000362588 141 ntBASIC3.6□□□□□ -1.83
APOEP02649 RNU6-532P-201ENST00000384318 107 ntBASIC3.6□□□□□ -1.83
APOEP02649 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.6□□□□□ -1.83
APOEP02649 AC017079.2-201ENST00000416102 485 ntBASIC3.6□□□□□ -1.83
APOEP02649 MTCO1P52-201ENST00000433928 531 ntBASIC3.6□□□□□ -1.83
APOEP02649 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.6□□□□□ -1.83
APOEP02649 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.6□□□□□ -1.83
APOEP02649 RPL6P5-201ENST00000445678 828 ntBASIC3.6□□□□□ -1.83
APOEP02649 RPS20P32-201ENST00000456044 356 ntBASIC3.6□□□□□ -1.83
APOEP02649 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC3.6□□□□□ -1.83
APOEP02649 AC020893.1-201ENST00000502452 580 ntBASIC3.6□□□□□ -1.83
APOEP02649 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.6□□□□□ -1.83
APOEP02649 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.6□□□□□ -1.83
APOEP02649 AC106785.3-201ENST00000564064 847 ntBASIC3.6□□□□□ -1.83
APOEP02649 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.6□□□□□ -1.83
APOEP02649 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.6□□□□□ -1.83
APOEP02649 RN7SL339P-201ENST00000580597 296 ntBASIC3.6□□□□□ -1.83
APOEP02649 AP001180.3-201ENST00000582221 145 ntBASIC3.6□□□□□ -1.83
APOEP02649 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.6□□□□□ -1.83
APOEP02649 AC010680.4-201ENST00000605334 543 ntBASIC3.6□□□□□ -1.83
APOEP02649 AC084757.4-201ENST00000616350 526 ntBASIC3.6□□□□□ -1.83
APOEP02649 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
APOEP02649 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.6□□□□□ -1.83
APOEP02649 AC093908.1-201ENST00000623125 8092 ntBASIC3.6□□□□□ -1.83
APOEP02649 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.6□□□□□ -1.83
APOEP02649 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
APOEP02649 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
APOEP02649 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.59□□□□□ -1.83
APOEP02649 AC138393.1-206ENST00000540997 1886 ntBASIC3.59□□□□□ -1.83
APOEP02649 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC3.59□□□□□ -1.83
APOEP02649 HMGB3P18-201ENST00000406327 590 ntBASIC3.59□□□□□ -1.83
APOEP02649 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.59□□□□□ -1.83
APOEP02649 RNU6-55P-201ENST00000411092 107 ntBASIC3.59□□□□□ -1.83
APOEP02649 RNU6-954P-201ENST00000411355 107 ntBASIC3.59□□□□□ -1.83
APOEP02649 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.59□□□□□ -1.83
APOEP02649 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.59□□□□□ -1.83
APOEP02649 AL357552.1-201ENST00000445254 415 ntBASIC3.59□□□□□ -1.83
APOEP02649 PPIAP3-201ENST00000450588 505 ntBASIC3.59□□□□□ -1.83
APOEP02649 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
APOEP02649 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC3.59□□□□□ -1.83
APOEP02649 AC023050.1-201ENST00000498198 304 ntBASIC3.59□□□□□ -1.83
APOEP02649 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.59□□□□□ -1.83
APOEP02649 NDUFB9P3-201ENST00000521269 501 ntBASIC3.59□□□□□ -1.83
APOEP02649 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.59□□□□□ -1.83
APOEP02649 AC053481.3-201ENST00000577881 843 ntBASIC3.59□□□□□ -1.83
APOEP02649 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.59□□□□□ -1.83
APOEP02649 AC067852.4-201ENST00000590314 478 ntBASIC3.59□□□□□ -1.83
APOEP02649 BNIP3P33-201ENST00000598912 569 ntBASIC3.59□□□□□ -1.83
APOEP02649 AP003117.1-201ENST00000602771 554 ntBASIC3.59□□□□□ -1.83
APOEP02649 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.59□□□□□ -1.83
APOEP02649 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
APOEP02649 AL355365.1-201ENST00000616480 294 ntBASIC3.59□□□□□ -1.83
APOEP02649 AL133370.2-201ENST00000619934 439 ntBASIC3.59□□□□□ -1.83
APOEP02649 AC138649.5-201ENST00000637456 137 ntBASIC3.59□□□□□ -1.83
APOEP02649 AC021755.1-201ENST00000559747 1447 ntBASIC3.59□□□□□ -1.84
APOEP02649 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
APOEP02649 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.84
APOEP02649 AL645937.1-201ENST00000641739 1652 ntBASIC3.59□□□□□ -1.84
APOEP02649 AC007496.3-201ENST00000624987 3443 ntBASIC3.58□□□□□ -1.84
APOEP02649 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
APOEP02649 MIR30E-201ENST00000362104 92 ntBASIC3.58□□□□□ -1.84
APOEP02649 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
APOEP02649 MIR124-3-201ENST00000384866 87 ntBASIC3.58□□□□□ -1.84
APOEP02649 SNORD17-201ENST00000390930 237 ntBASIC3.58□□□□□ -1.84
APOEP02649 RSL24D1P1-201ENST00000404972 493 ntBASIC3.58□□□□□ -1.84
APOEP02649 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.58□□□□□ -1.84
APOEP02649 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.58□□□□□ -1.84
APOEP02649 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.58□□□□□ -1.84
APOEP02649 PRSS3P4-201ENST00000453323 162 ntBASIC3.58□□□□□ -1.84
APOEP02649 AP000563.1-201ENST00000490865 758 ntBASIC3.58□□□□□ -1.84
APOEP02649 FCF1P8-201ENST00000510322 597 ntBASIC3.58□□□□□ -1.84
APOEP02649 SNORA70.19-201ENST00000516717 90 ntBASIC3.58□□□□□ -1.84
APOEP02649 AC011602.1-201ENST00000546484 331 ntBASIC3.58□□□□□ -1.84
APOEP02649 CCNG2P1-201ENST00000549521 1000 ntBASIC3.58□□□□□ -1.84
APOEP02649 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.58□□□□□ -1.84
APOEP02649 MIR5186-201ENST00000577504 120 ntBASIC3.58□□□□□ -1.84
APOEP02649 AC006270.2-201ENST00000578523 652 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms