Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AL356321.1-201ENST00000621360 228 ntBASIC2.89□□□□□ -1.95
SPTA1P02549 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SPTA1P02549 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.89□□□□□ -1.95
SPTA1P02549 AL078595.2-201ENST00000605309 1780 ntBASIC2.89□□□□□ -1.95
SPTA1P02549 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC2.89□□□□□ -1.95
SPTA1P02549 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SPTA1P02549 AL135786.1-201ENST00000415892 214 ntBASIC2.89□□□□□ -1.95
SPTA1P02549 AC012065.2-201ENST00000421295 375 ntBASIC2.89□□□□□ -1.95
SPTA1P02549 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC2.89□□□□□ -1.95
SPTA1P02549 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.89□□□□□ -1.95
SPTA1P02549 ELOCP23-201ENST00000452014 332 ntBASIC2.89□□□□□ -1.95
SPTA1P02549 RPS4XP2-201ENST00000458402 793 ntBASIC2.89□□□□□ -1.95
SPTA1P02549 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC2.89□□□□□ -1.95
SPTA1P02549 AC026333.2-201ENST00000542164 106 ntBASIC2.89□□□□□ -1.95
SPTA1P02549 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.89□□□□□ -1.95
SPTA1P02549 H3F3AP1-201ENST00000559984 334 ntBASIC2.89□□□□□ -1.95
SPTA1P02549 AP005262.1-201ENST00000582646 997 ntBASIC2.89□□□□□ -1.95
SPTA1P02549 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC2.89□□□□□ -1.95
SPTA1P02549 AC026523.2-201ENST00000625039 7739 ntBASIC2.89□□□□□ -1.95
SPTA1P02549 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC2.89□□□□□ -1.95
SPTA1P02549 MAPK10-372ENST00000641954 3413 ntBASIC2.88□□□□□ -1.95
SPTA1P02549 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.88□□□□□ -1.95
SPTA1P02549 AL672167.1-206ENST00000356293 943 ntBASIC2.88□□□□□ -1.95
SPTA1P02549 RNU6-283P-201ENST00000364788 107 ntBASIC2.88□□□□□ -1.95
SPTA1P02549 MIR512-1-201ENST00000384913 84 ntBASIC2.88□□□□□ -1.95
SPTA1P02549 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.88□□□□□ -1.95
SPTA1P02549 RN7SKP199-201ENST00000410325 305 ntBASIC2.88□□□□□ -1.95
SPTA1P02549 AC063979.1-201ENST00000415539 377 ntBASIC2.88□□□□□ -1.95
SPTA1P02549 AL031736.2-201ENST00000426573 787 ntBASIC2.88□□□□□ -1.95
SPTA1P02549 MOB1AP1-201ENST00000430903 535 ntBASIC2.88□□□□□ -1.95
SPTA1P02549 AL591806.2-201ENST00000433122 173 ntBASIC2.88□□□□□ -1.95
SPTA1P02549 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
SPTA1P02549 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
SPTA1P02549 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC2.88□□□□□ -1.95
SPTA1P02549 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.88□□□□□ -1.95
SPTA1P02549 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.88□□□□□ -1.95
SPTA1P02549 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SPTA1P02549 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
SPTA1P02549 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
SPTA1P02549 AC092079.1-201ENST00000558620 1985 ntBASIC2.88□□□□□ -1.95
SPTA1P02549 AC005261.6-201ENST00000623072 1387 ntBASIC2.88□□□□□ -1.95
SPTA1P02549 HSPE1P8-201ENST00000406997 288 ntBASIC2.88□□□□□ -1.95
SPTA1P02549 RPS4XP6-201ENST00000477670 797 ntBASIC2.88□□□□□ -1.95
SPTA1P02549 ARL4AP1-201ENST00000503220 705 ntBASIC2.88□□□□□ -1.95
SPTA1P02549 SNORD53-201ENST00000579969 78 ntBASIC2.88□□□□□ -1.95
SPTA1P02549 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SPTA1P02549 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SPTA1P02549 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC2.87□□□□□ -1.95
SPTA1P02549 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC2.87□□□□□ -1.95
SPTA1P02549 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SPTA1P02549 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
SPTA1P02549 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
SPTA1P02549 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC2.87□□□□□ -1.95
SPTA1P02549 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC2.87□□□□□ -1.95
SPTA1P02549 HSPE1P6-201ENST00000479457 291 ntBASIC2.87□□□□□ -1.95
SPTA1P02549 HMGB1P3-201ENST00000502802 616 ntBASIC2.87□□□□□ -1.95
SPTA1P02549 AC113430.1-201ENST00000506872 718 ntBASIC2.87□□□□□ -1.95
SPTA1P02549 ASNSP4-201ENST00000511103 447 ntBASIC2.87□□□□□ -1.95
SPTA1P02549 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC2.87□□□□□ -1.95
SPTA1P02549 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SPTA1P02549 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC2.87□□□□□ -1.95
SPTA1P02549 YWHAZP1-201ENST00000556286 722 ntBASIC2.87□□□□□ -1.95
SPTA1P02549 AC006363.1-201ENST00000603806 463 ntBASIC2.87□□□□□ -1.95
SPTA1P02549 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SPTA1P02549 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
SPTA1P02549 AC048351.1-201ENST00000420064 602 ntBASIC2.87□□□□□ -1.95
SPTA1P02549 MTCO1P51-201ENST00000427672 1060 ntBASIC2.87□□□□□ -1.95
SPTA1P02549 RPL12P18-201ENST00000437175 325 ntBASIC2.87□□□□□ -1.95
SPTA1P02549 AC021205.1-201ENST00000468797 348 ntBASIC2.87□□□□□ -1.95
SPTA1P02549 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC2.87□□□□□ -1.95
SPTA1P02549 RPL23AP73-201ENST00000492507 471 ntBASIC2.87□□□□□ -1.95
SPTA1P02549 APOOP4-201ENST00000513530 597 ntBASIC2.87□□□□□ -1.95
SPTA1P02549 AL359535.1-201ENST00000612100 1087 ntBASIC2.87□□□□□ -1.95
SPTA1P02549 AC241585.2-209ENST00000638217 143 ntBASIC2.87□□□□□ -1.95
SPTA1P02549 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
SPTA1P02549 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC2.86□□□□□ -1.95
SPTA1P02549 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
SPTA1P02549 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
SPTA1P02549 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
SPTA1P02549 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SPTA1P02549 MIR22-201ENST00000362190 85 ntBASIC2.86□□□□□ -1.95
SPTA1P02549 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.86□□□□□ -1.95
SPTA1P02549 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SPTA1P02549 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC2.86□□□□□ -1.95
SPTA1P02549 EIF4EP1-201ENST00000422311 642 ntBASIC2.86□□□□□ -1.95
SPTA1P02549 AL672296.1-201ENST00000427780 2158 ntBASIC2.86□□□□□ -1.95
SPTA1P02549 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC2.86□□□□□ -1.95
SPTA1P02549 AC245517.4-201ENST00000448601 281 ntBASIC2.86□□□□□ -1.95
SPTA1P02549 HCG17-214ENST00000453558 732 ntTSL 5 BASIC2.86□□□□□ -1.95
SPTA1P02549 AC005229.2-201ENST00000456995 399 ntBASIC2.86□□□□□ -1.95
SPTA1P02549 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.86□□□□□ -1.95
SPTA1P02549 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.86□□□□□ -1.95
SPTA1P02549 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC2.86□□□□□ -1.95
SPTA1P02549 AL353600.1-201ENST00000608148 251 ntBASIC2.86□□□□□ -1.95
SPTA1P02549 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC2.86□□□□□ -1.95
SPTA1P02549 Y_RNA.4-201ENST00000362333 112 ntBASIC2.85□□□□□ -1.95
SPTA1P02549 Y_RNA.118-201ENST00000363300 101 ntBASIC2.85□□□□□ -1.95
SPTA1P02549 RPL23AP82-202ENST00000427528 469 ntBASIC2.85□□□□□ -1.95
SPTA1P02549 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.85□□□□□ -1.95
SPTA1P02549 CENPBD1P1-201ENST00000464061 469 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms