Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 OR8L1P-201ENST00000534005 955 ntBASIC4.1□□□□□ -1.75
NKX2-2O95096 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.1□□□□□ -1.75
NKX2-2O95096 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.1□□□□□ -1.75
NKX2-2O95096 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.1□□□□□ -1.75
NKX2-2O95096 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.1□□□□□ -1.75
NKX2-2O95096 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.1□□□□□ -1.75
NKX2-2O95096 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.1□□□□□ -1.75
NKX2-2O95096 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.1□□□□□ -1.75
NKX2-2O95096 AC007448.1-201ENST00000582714 234 ntBASIC4.1□□□□□ -1.75
NKX2-2O95096 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.1□□□□□ -1.75
NKX2-2O95096 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.1□□□□□ -1.75
NKX2-2O95096 MIR4999-201ENST00000585029 91 ntBASIC4.1□□□□□ -1.75
NKX2-2O95096 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.1□□□□□ -1.75
NKX2-2O95096 Z98200.1-201ENST00000607298 470 ntBASIC4.1□□□□□ -1.75
NKX2-2O95096 AL360219.1-201ENST00000610230 366 ntBASIC4.1□□□□□ -1.75
NKX2-2O95096 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.1□□□□□ -1.75
NKX2-2O95096 AC243773.3-201ENST00000613270 256 ntBASIC4.1□□□□□ -1.75
NKX2-2O95096 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.1□□□□□ -1.75
NKX2-2O95096 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NKX2-2O95096 ZNF542P-204ENST00000482727 1305 ntBASIC4.1□□□□□ -1.75
NKX2-2O95096 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.1□□□□□ -1.75
NKX2-2O95096 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.1□□□□□ -1.75
NKX2-2O95096 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NKX2-2O95096 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.1□□□□□ -1.75
NKX2-2O95096 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
NKX2-2O95096 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
NKX2-2O95096 AL359893.1-201ENST00000447628 1580 ntBASIC4.1□□□□□ -1.75
NKX2-2O95096 AC091046.3-201ENST00000631455 1574 ntBASIC4.1□□□□□ -1.75
NKX2-2O95096 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NKX2-2O95096 AC025031.4-201ENST00000621248 3271 ntBASIC4.1□□□□□ -1.75
NKX2-2O95096 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NKX2-2O95096 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NKX2-2O95096 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NKX2-2O95096 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
NKX2-2O95096 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
NKX2-2O95096 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.09□□□□□ -1.75
NKX2-2O95096 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
NKX2-2O95096 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.09□□□□□ -1.75
NKX2-2O95096 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.09□□□□□ -1.75
NKX2-2O95096 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.09□□□□□ -1.75
NKX2-2O95096 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NKX2-2O95096 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NKX2-2O95096 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NKX2-2O95096 RNA5SP505-201ENST00000364748 108 ntBASIC4.09□□□□□ -1.75
NKX2-2O95096 RNU6-398P-201ENST00000384143 109 ntBASIC4.09□□□□□ -1.75
NKX2-2O95096 RNU5A-2P-201ENST00000384337 116 ntBASIC4.09□□□□□ -1.75
NKX2-2O95096 MIR153-1-201ENST00000384914 90 ntBASIC4.09□□□□□ -1.75
NKX2-2O95096 ATP5F1P3-201ENST00000397213 657 ntBASIC4.09□□□□□ -1.75
NKX2-2O95096 SNRPEP2-201ENST00000397592 279 ntBASIC4.09□□□□□ -1.75
NKX2-2O95096 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NKX2-2O95096 HDGFP1-201ENST00000405943 252 ntBASIC4.09□□□□□ -1.75
NKX2-2O95096 TPT1P2-201ENST00000413105 503 ntBASIC4.09□□□□□ -1.75
NKX2-2O95096 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NKX2-2O95096 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.09□□□□□ -1.75
NKX2-2O95096 RPL31P45-201ENST00000419532 356 ntBASIC4.09□□□□□ -1.75
NKX2-2O95096 AC069213.2-201ENST00000420238 366 ntBASIC4.09□□□□□ -1.75
NKX2-2O95096 OFD1P18Y-201ENST00000420889 959 ntBASIC4.09□□□□□ -1.75
NKX2-2O95096 PDSS1P1-201ENST00000422953 1114 ntBASIC4.09□□□□□ -1.75
NKX2-2O95096 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.09□□□□□ -1.75
NKX2-2O95096 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.09□□□□□ -1.75
NKX2-2O95096 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.09□□□□□ -1.75
NKX2-2O95096 HMGB3P9-201ENST00000441799 583 ntBASIC4.09□□□□□ -1.75
NKX2-2O95096 MTCYBP3-201ENST00000445588 1137 ntBASIC4.09□□□□□ -1.75
NKX2-2O95096 AL606662.1-201ENST00000445763 553 ntBASIC4.09□□□□□ -1.75
NKX2-2O95096 RPL29P29-201ENST00000448725 423 ntBASIC4.09□□□□□ -1.75
NKX2-2O95096 MTCO3P11-201ENST00000455103 774 ntBASIC4.09□□□□□ -1.75
NKX2-2O95096 PABPC1P3-201ENST00000469174 459 ntBASIC4.09□□□□□ -1.75
NKX2-2O95096 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
NKX2-2O95096 RPS15AP17-201ENST00000470598 390 ntBASIC4.09□□□□□ -1.75
NKX2-2O95096 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.09□□□□□ -1.75
NKX2-2O95096 NCOR1P1-202ENST00000486162 291 ntBASIC4.09□□□□□ -1.75
NKX2-2O95096 RPS3AP22-201ENST00000488297 769 ntBASIC4.09□□□□□ -1.75
NKX2-2O95096 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.09□□□□□ -1.75
NKX2-2O95096 MTCYBP17-201ENST00000503579 789 ntBASIC4.09□□□□□ -1.75
NKX2-2O95096 AC147055.4-201ENST00000504399 745 ntBASIC4.09□□□□□ -1.75
NKX2-2O95096 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.09□□□□□ -1.75
NKX2-2O95096 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.09□□□□□ -1.75
NKX2-2O95096 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.09□□□□□ -1.75
NKX2-2O95096 HNRNPKP5-201ENST00000515300 253 ntBASIC4.09□□□□□ -1.75
NKX2-2O95096 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.09□□□□□ -1.75
NKX2-2O95096 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.09□□□□□ -1.75
NKX2-2O95096 UBE2NP1-201ENST00000545592 458 ntBASIC4.09□□□□□ -1.75
NKX2-2O95096 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.09□□□□□ -1.75
NKX2-2O95096 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.09□□□□□ -1.75
NKX2-2O95096 HSPE1P3-201ENST00000559254 309 ntBASIC4.09□□□□□ -1.75
NKX2-2O95096 HMGB3P26-201ENST00000560051 582 ntBASIC4.09□□□□□ -1.75
NKX2-2O95096 LARP7P2-201ENST00000575306 125 ntBASIC4.09□□□□□ -1.75
NKX2-2O95096 MIR4637-201ENST00000582405 84 ntBASIC4.09□□□□□ -1.75
NKX2-2O95096 OR4G1P-201ENST00000588632 938 ntBASIC4.09□□□□□ -1.75
NKX2-2O95096 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.09□□□□□ -1.75
NKX2-2O95096 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.09□□□□□ -1.75
NKX2-2O95096 AC079587.1-201ENST00000603846 277 ntBASIC4.09□□□□□ -1.75
NKX2-2O95096 AC018638.7-201ENST00000605836 1114 ntBASIC4.09□□□□□ -1.75
NKX2-2O95096 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.09□□□□□ -1.75
NKX2-2O95096 AL513477.2-201ENST00000607858 568 ntBASIC4.09□□□□□ -1.75
NKX2-2O95096 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.09□□□□□ -1.75
NKX2-2O95096 AC012409.3-201ENST00000611343 981 ntBASIC4.09□□□□□ -1.75
NKX2-2O95096 AC009318.4-201ENST00000620496 486 ntBASIC4.09□□□□□ -1.75
NKX2-2O95096 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.09□□□□□ -1.75
NKX2-2O95096 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms