Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AC025459.1-201ENST00000504072 156 ntBASIC3.23□□□□□ -1.89
SGCEO43556 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
SGCEO43556 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.23□□□□□ -1.89
SGCEO43556 TMEM248P1-201ENST00000510579 951 ntBASIC3.23□□□□□ -1.89
SGCEO43556 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.23□□□□□ -1.89
SGCEO43556 NPM1P41-201ENST00000512920 831 ntBASIC3.23□□□□□ -1.89
SGCEO43556 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.23□□□□□ -1.89
SGCEO43556 MTND2P26-201ENST00000528255 1029 ntBASIC3.23□□□□□ -1.89
SGCEO43556 AL139174.1-201ENST00000531489 886 ntBASIC3.23□□□□□ -1.89
SGCEO43556 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
SGCEO43556 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.23□□□□□ -1.89
SGCEO43556 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.23□□□□□ -1.89
SGCEO43556 TRAV37-201ENST00000553906 342 ntBASIC3.23□□□□□ -1.89
SGCEO43556 TRAV15-201ENST00000556680 249 ntBASIC3.23□□□□□ -1.89
SGCEO43556 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SGCEO43556 AC090751.1-201ENST00000566966 267 ntBASIC3.23□□□□□ -1.89
SGCEO43556 AC090616.5-202ENST00000582111 297 ntBASIC3.23□□□□□ -1.89
SGCEO43556 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.23□□□□□ -1.89
SGCEO43556 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.23□□□□□ -1.89
SGCEO43556 KLKP1-201ENST00000595979 403 ntBASIC3.23□□□□□ -1.89
SGCEO43556 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
SGCEO43556 AC099676.1-201ENST00000608886 657 ntBASIC3.23□□□□□ -1.89
SGCEO43556 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
SGCEO43556 OR6C71P-202ENST00000641886 1107 ntBASIC3.23□□□□□ -1.89
SGCEO43556 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SGCEO43556 AC118273.1-201ENST00000525324 3006 ntBASIC3.23□□□□□ -1.89
SGCEO43556 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.22□□□□□ -1.89
SGCEO43556 AL672296.1-201ENST00000427780 2158 ntBASIC3.22□□□□□ -1.89
SGCEO43556 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SGCEO43556 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.22□□□□□ -1.89
SGCEO43556 MTND5P27-201ENST00000428871 1720 ntBASIC3.22□□□□□ -1.89
SGCEO43556 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SGCEO43556 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SGCEO43556 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SGCEO43556 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.22□□□□□ -1.89
SGCEO43556 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SGCEO43556 RNU6-152P-201ENST00000384037 107 ntBASIC3.22□□□□□ -1.89
SGCEO43556 SNORA48.8-201ENST00000391324 134 ntBASIC3.22□□□□□ -1.89
SGCEO43556 SOD2P1-201ENST00000396543 562 ntBASIC3.22□□□□□ -1.89
SGCEO43556 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SGCEO43556 RNU4-74P-201ENST00000411280 161 ntBASIC3.22□□□□□ -1.89
SGCEO43556 RNU2-6P-201ENST00000411404 190 ntBASIC3.22□□□□□ -1.89
SGCEO43556 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.22□□□□□ -1.89
SGCEO43556 MTND2P16-201ENST00000419987 799 ntBASIC3.22□□□□□ -1.89
SGCEO43556 OR4F13P-201ENST00000428478 931 ntBASIC3.22□□□□□ -1.89
SGCEO43556 MOB1AP1-201ENST00000430903 535 ntBASIC3.22□□□□□ -1.89
SGCEO43556 NEK4P1-201ENST00000433383 879 ntBASIC3.22□□□□□ -1.89
SGCEO43556 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.22□□□□□ -1.89
SGCEO43556 AL590399.6-201ENST00000446396 307 ntBASIC3.22□□□□□ -1.89
SGCEO43556 UBDP1-202ENST00000457888 382 ntBASIC3.22□□□□□ -1.89
SGCEO43556 AL133162.1-201ENST00000463228 453 ntBASIC3.22□□□□□ -1.89
SGCEO43556 RPL6P9-201ENST00000466502 859 ntBASIC3.22□□□□□ -1.89
SGCEO43556 AC022034.3-201ENST00000471393 478 ntBASIC3.22□□□□□ -1.89
SGCEO43556 NCOR1P1-202ENST00000486162 291 ntBASIC3.22□□□□□ -1.89
SGCEO43556 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.22□□□□□ -1.89
SGCEO43556 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC3.22□□□□□ -1.89
SGCEO43556 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.22□□□□□ -1.89
SGCEO43556 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SGCEO43556 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.22□□□□□ -1.89
SGCEO43556 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.22□□□□□ -1.89
SGCEO43556 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SGCEO43556 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.22□□□□□ -1.89
SGCEO43556 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.22□□□□□ -1.89
SGCEO43556 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.22□□□□□ -1.89
SGCEO43556 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.22□□□□□ -1.89
SGCEO43556 AC107982.3-201ENST00000584957 985 ntBASIC3.22□□□□□ -1.89
SGCEO43556 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.22□□□□□ -1.89
SGCEO43556 AL451086.1-201ENST00000605596 223 ntBASIC3.22□□□□□ -1.89
SGCEO43556 AL359535.1-201ENST00000612100 1087 ntBASIC3.22□□□□□ -1.89
SGCEO43556 AC068831.8-201ENST00000620171 435 ntBASIC3.22□□□□□ -1.89
SGCEO43556 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
SGCEO43556 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SGCEO43556 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.22□□□□□ -1.89
SGCEO43556 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.21□□□□□ -1.89
SGCEO43556 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.21□□□□□ -1.89
SGCEO43556 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.21□□□□□ -1.9
SGCEO43556 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SGCEO43556 HSPA8P19-201ENST00000505359 1517 ntBASIC3.21□□□□□ -1.9
SGCEO43556 XPOTP1-201ENST00000443317 2398 ntBASIC3.21□□□□□ -1.9
SGCEO43556 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
SGCEO43556 SNORA7.2-201ENST00000364446 145 ntBASIC3.21□□□□□ -1.9
SGCEO43556 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.21□□□□□ -1.9
SGCEO43556 BTBD10P2-201ENST00000404779 676 ntBASIC3.21□□□□□ -1.9
SGCEO43556 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.21□□□□□ -1.9
SGCEO43556 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SGCEO43556 NDUFB1P1-201ENST00000435191 180 ntBASIC3.21□□□□□ -1.9
SGCEO43556 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC3.21□□□□□ -1.9
SGCEO43556 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.21□□□□□ -1.9
SGCEO43556 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.21□□□□□ -1.9
SGCEO43556 RPS27P29-201ENST00000463110 252 ntBASIC3.21□□□□□ -1.9
SGCEO43556 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SGCEO43556 AC008489.1-201ENST00000524271 483 ntBASIC3.21□□□□□ -1.9
SGCEO43556 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.21□□□□□ -1.9
SGCEO43556 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.21□□□□□ -1.9
SGCEO43556 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.21□□□□□ -1.9
SGCEO43556 AC011468.4-201ENST00000603942 409 ntBASIC3.21□□□□□ -1.9
SGCEO43556 AC022387.2-201ENST00000604050 448 ntBASIC3.21□□□□□ -1.9
SGCEO43556 AC024941.1-201ENST00000612250 334 ntBASIC3.21□□□□□ -1.9
SGCEO43556 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SGCEO43556 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 169.1 ms