Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
PDLIM1O00151 SNORD65C-201ENST00000390962 71 ntBASIC3.76□□□□□ -1.81
PDLIM1O00151 RPL22P22-201ENST00000395439 379 ntBASIC3.76□□□□□ -1.81
PDLIM1O00151 AL161909.1-201ENST00000397390 712 ntBASIC3.76□□□□□ -1.81
PDLIM1O00151 HMGB3P19-201ENST00000403971 560 ntBASIC3.76□□□□□ -1.81
PDLIM1O00151 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.76□□□□□ -1.81
PDLIM1O00151 AL355615.1-201ENST00000406187 641 ntBASIC3.76□□□□□ -1.81
PDLIM1O00151 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.76□□□□□ -1.81
PDLIM1O00151 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.76□□□□□ -1.81
PDLIM1O00151 AC004987.3-201ENST00000413879 771 ntBASIC3.76□□□□□ -1.81
PDLIM1O00151 PRELID3BP11-201ENST00000414230 479 ntBASIC3.76□□□□□ -1.81
PDLIM1O00151 RPL17P36-201ENST00000420302 549 ntBASIC3.76□□□□□ -1.81
PDLIM1O00151 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.76□□□□□ -1.81
PDLIM1O00151 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.76□□□□□ -1.81
PDLIM1O00151 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.76□□□□□ -1.81
PDLIM1O00151 RPL37P1-201ENST00000432310 284 ntBASIC3.76□□□□□ -1.81
PDLIM1O00151 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.76□□□□□ -1.81
PDLIM1O00151 BTF3P10-201ENST00000433415 495 ntBASIC3.76□□□□□ -1.81
PDLIM1O00151 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.76□□□□□ -1.81
PDLIM1O00151 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.76□□□□□ -1.81
PDLIM1O00151 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.76□□□□□ -1.81
PDLIM1O00151 RPS26P30-201ENST00000443431 335 ntBASIC3.76□□□□□ -1.81
PDLIM1O00151 AC005002.1-201ENST00000447458 540 ntBASIC3.76□□□□□ -1.81
PDLIM1O00151 MRPS31P2-201ENST00000451581 518 ntBASIC3.76□□□□□ -1.81
PDLIM1O00151 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.76□□□□□ -1.81
PDLIM1O00151 RPS20P32-201ENST00000456044 356 ntBASIC3.76□□□□□ -1.81
PDLIM1O00151 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.76□□□□□ -1.81
PDLIM1O00151 AC096992.1-201ENST00000459808 709 ntBASIC3.76□□□□□ -1.81
PDLIM1O00151 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
PDLIM1O00151 RN7SL385P-201ENST00000468873 276 ntBASIC3.76□□□□□ -1.81
PDLIM1O00151 RPL21P103-201ENST00000479921 488 ntBASIC3.76□□□□□ -1.81
PDLIM1O00151 AC073522.1-201ENST00000483312 377 ntBASIC3.76□□□□□ -1.81
PDLIM1O00151 AC008494.2-201ENST00000514544 370 ntBASIC3.76□□□□□ -1.81
PDLIM1O00151 RNA5SP519-201ENST00000516480 119 ntBASIC3.76□□□□□ -1.81
PDLIM1O00151 OR5D17P-201ENST00000531492 978 ntBASIC3.76□□□□□ -1.81
PDLIM1O00151 CYCSP29-201ENST00000533731 318 ntBASIC3.76□□□□□ -1.81
PDLIM1O00151 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.76□□□□□ -1.81
PDLIM1O00151 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.76□□□□□ -1.81
PDLIM1O00151 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
PDLIM1O00151 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.76□□□□□ -1.81
PDLIM1O00151 AC022968.1-201ENST00000567372 442 ntBASIC3.76□□□□□ -1.81
PDLIM1O00151 AC023824.3-201ENST00000569003 562 ntBASIC3.76□□□□□ -1.81
PDLIM1O00151 MIR3939-201ENST00000582614 106 ntBASIC3.76□□□□□ -1.81
PDLIM1O00151 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.76□□□□□ -1.81
PDLIM1O00151 DNAJC19P3-201ENST00000594491 331 ntBASIC3.76□□□□□ -1.81
PDLIM1O00151 AC114878.2-201ENST00000604863 1251 ntBASIC3.76□□□□□ -1.81
PDLIM1O00151 AL590392.1-201ENST00000604960 446 ntBASIC3.76□□□□□ -1.81
PDLIM1O00151 AL392112.1-201ENST00000605115 829 ntBASIC3.76□□□□□ -1.81
PDLIM1O00151 AL591424.2-201ENST00000617023 128 ntBASIC3.76□□□□□ -1.81
PDLIM1O00151 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
PDLIM1O00151 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.76□□□□□ -1.81
PDLIM1O00151 AC106858.1-201ENST00000637497 429 ntBASIC3.76□□□□□ -1.81
PDLIM1O00151 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
PDLIM1O00151 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PDLIM1O00151 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PDLIM1O00151 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.76□□□□□ -1.81
PDLIM1O00151 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
PDLIM1O00151 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PDLIM1O00151 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PDLIM1O00151 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
PDLIM1O00151 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PDLIM1O00151 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.75□□□□□ -1.81
PDLIM1O00151 ZNF33CP-201ENST00000432492 2030 ntBASIC3.75□□□□□ -1.81
PDLIM1O00151 AP002001.2-201ENST00000529025 1469 ntBASIC3.75□□□□□ -1.81
PDLIM1O00151 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
PDLIM1O00151 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PDLIM1O00151 SNORD35B-201ENST00000363660 87 ntBASIC3.75□□□□□ -1.81
PDLIM1O00151 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PDLIM1O00151 RNU6-468P-201ENST00000384003 109 ntBASIC3.75□□□□□ -1.81
PDLIM1O00151 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.75□□□□□ -1.81
PDLIM1O00151 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PDLIM1O00151 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.75□□□□□ -1.81
PDLIM1O00151 ZNF736P1Y-201ENST00000440402 1276 ntBASIC3.75□□□□□ -1.81
PDLIM1O00151 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PDLIM1O00151 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.75□□□□□ -1.81
PDLIM1O00151 PPIAP3-201ENST00000450588 505 ntBASIC3.75□□□□□ -1.81
PDLIM1O00151 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.75□□□□□ -1.81
PDLIM1O00151 RPL7P24-201ENST00000493052 752 ntBASIC3.75□□□□□ -1.81
PDLIM1O00151 AC108475.1-201ENST00000507880 950 ntBASIC3.75□□□□□ -1.81
PDLIM1O00151 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.75□□□□□ -1.81
PDLIM1O00151 AC002456.2-201ENST00000509356 380 ntBASIC3.75□□□□□ -1.81
PDLIM1O00151 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PDLIM1O00151 AC087894.1-201ENST00000538359 518 ntBASIC3.75□□□□□ -1.81
PDLIM1O00151 CYB5AP5-201ENST00000549779 389 ntBASIC3.75□□□□□ -1.81
PDLIM1O00151 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.75□□□□□ -1.81
PDLIM1O00151 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.75□□□□□ -1.81
PDLIM1O00151 AC022655.2-201ENST00000577280 318 ntBASIC3.75□□□□□ -1.81
PDLIM1O00151 AP000919.1-202ENST00000581139 1264 ntBASIC3.75□□□□□ -1.81
PDLIM1O00151 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.75□□□□□ -1.81
PDLIM1O00151 IPO5P1-202ENST00000600039 287 ntBASIC3.75□□□□□ -1.81
PDLIM1O00151 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.75□□□□□ -1.81
PDLIM1O00151 AC105429.2-201ENST00000610567 517 ntBASIC3.75□□□□□ -1.81
PDLIM1O00151 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.75□□□□□ -1.81
PDLIM1O00151 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PDLIM1O00151 AC018926.3-201ENST00000618841 406 ntBASIC3.75□□□□□ -1.81
PDLIM1O00151 MIR8059-201ENST00000620427 81 ntBASIC3.75□□□□□ -1.81
PDLIM1O00151 AC092608.3-201ENST00000625017 386 ntBASIC3.75□□□□□ -1.81
PDLIM1O00151 ZNF849P-201ENST00000594711 1566 ntBASIC3.75□□□□□ -1.81
PDLIM1O00151 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PDLIM1O00151 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms