Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 RN7SL604P-201ENST00000492589 296 ntBASIC4.12□□□□□ -1.75
CCDC188H7C350 AC005726.1-201ENST00000494679 427 ntBASIC4.12□□□□□ -1.75
CCDC188H7C350 RNF138P1-201ENST00000502765 546 ntBASIC4.12□□□□□ -1.75
CCDC188H7C350 PRELID3BP6-201ENST00000503839 571 ntBASIC4.12□□□□□ -1.75
CCDC188H7C350 MTATP6P9-201ENST00000515039 680 ntBASIC4.12□□□□□ -1.75
CCDC188H7C350 RN7SKP92-201ENST00000517266 244 ntBASIC4.12□□□□□ -1.75
CCDC188H7C350 AC019227.1-201ENST00000526902 510 ntBASIC4.12□□□□□ -1.75
CCDC188H7C350 OR8I1P-201ENST00000529291 931 ntBASIC4.12□□□□□ -1.75
CCDC188H7C350 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC188H7C350 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC188H7C350 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC188H7C350 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.12□□□□□ -1.75
CCDC188H7C350 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.12□□□□□ -1.75
CCDC188H7C350 AC091905.1-201ENST00000624400 311 ntBASIC4.12□□□□□ -1.75
CCDC188H7C350 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC188H7C350 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC188H7C350 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
CCDC188H7C350 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC188H7C350 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
CCDC188H7C350 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC188H7C350 Z99496.1-201ENST00000469424 1477 ntBASIC4.11□□□□□ -1.75
CCDC188H7C350 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC188H7C350 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC188H7C350 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC188H7C350 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC188H7C350 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CCDC188H7C350 MIR423-201ENST00000362201 94 ntBASIC4.11□□□□□ -1.75
CCDC188H7C350 RNU6-582P-201ENST00000362989 107 ntBASIC4.11□□□□□ -1.75
CCDC188H7C350 RNU6-839P-201ENST00000363347 108 ntBASIC4.11□□□□□ -1.75
CCDC188H7C350 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC188H7C350 HSPE1P8-201ENST00000406997 288 ntBASIC4.11□□□□□ -1.75
CCDC188H7C350 RAB28P1-201ENST00000411517 641 ntBASIC4.11□□□□□ -1.75
CCDC188H7C350 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC188H7C350 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC188H7C350 AC016397.1-201ENST00000412463 242 ntBASIC4.11□□□□□ -1.75
CCDC188H7C350 RPS7P9-201ENST00000414704 586 ntBASIC4.11□□□□□ -1.75
CCDC188H7C350 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC188H7C350 AL449283.1-202ENST00000418249 604 ntBASIC4.11□□□□□ -1.75
CCDC188H7C350 C1DP1-201ENST00000426049 402 ntBASIC4.11□□□□□ -1.75
CCDC188H7C350 DPRXP1-201ENST00000426312 460 ntBASIC4.11□□□□□ -1.75
CCDC188H7C350 MTCO1P3-201ENST00000429327 192 ntBASIC4.11□□□□□ -1.75
CCDC188H7C350 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC188H7C350 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC188H7C350 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC188H7C350 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC188H7C350 RN7SL738P-201ENST00000470264 297 ntBASIC4.11□□□□□ -1.75
CCDC188H7C350 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC188H7C350 AK3P4-201ENST00000504283 583 ntBASIC4.11□□□□□ -1.75
CCDC188H7C350 AC096571.1-202ENST00000506634 735 ntBASIC4.11□□□□□ -1.75
CCDC188H7C350 AC119751.4-201ENST00000507498 357 ntBASIC4.11□□□□□ -1.75
CCDC188H7C350 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC188H7C350 HIGD1AP3-201ENST00000515857 278 ntBASIC4.11□□□□□ -1.75
CCDC188H7C350 RNA5SP135-201ENST00000517019 125 ntBASIC4.11□□□□□ -1.75
CCDC188H7C350 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC188H7C350 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC188H7C350 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.11□□□□□ -1.75
CCDC188H7C350 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC188H7C350 LSM6P2-201ENST00000552208 177 ntBASIC4.11□□□□□ -1.75
CCDC188H7C350 AC068831.4-201ENST00000556118 109 ntBASIC4.11□□□□□ -1.75
CCDC188H7C350 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC188H7C350 AC090877.1-201ENST00000561418 344 ntBASIC4.11□□□□□ -1.75
CCDC188H7C350 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC188H7C350 AC093519.1-201ENST00000566109 298 ntBASIC4.11□□□□□ -1.75
CCDC188H7C350 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC188H7C350 GAS5-AS1-201ENST00000602767 694 ntBASIC4.11□□□□□ -1.75
CCDC188H7C350 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC188H7C350 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC188H7C350 PART1_2.1-201ENST00000612397 250 ntBASIC4.11□□□□□ -1.75
CCDC188H7C350 MIR6810-201ENST00000622701 70 ntBASIC4.11□□□□□ -1.75
CCDC188H7C350 AL512506.2-201ENST00000624472 458 ntBASIC4.11□□□□□ -1.75
CCDC188H7C350 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC188H7C350 AC005261.4-201ENST00000600047 1385 ntBASIC4.11□□□□□ -1.75
CCDC188H7C350 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC188H7C350 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CCDC188H7C350 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CCDC188H7C350 AC012618.3-205ENST00000637896 1496 ntBASIC4.11□□□□□ -1.75
CCDC188H7C350 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC188H7C350 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC188H7C350 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC188H7C350 PNPT1P2-201ENST00000456768 2050 ntBASIC4.1□□□□□ -1.75
CCDC188H7C350 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC188H7C350 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC188H7C350 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CCDC188H7C350 CR381670.1-201ENST00000624291 1693 ntBASIC4.1□□□□□ -1.75
CCDC188H7C350 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC188H7C350 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC188H7C350 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC188H7C350 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.1□□□□□ -1.75
CCDC188H7C350 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC188H7C350 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC188H7C350 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC188H7C350 RPS3AP9-201ENST00000417027 792 ntBASIC4.1□□□□□ -1.75
CCDC188H7C350 AC245028.1-201ENST00000423259 256 ntBASIC4.1□□□□□ -1.75
CCDC188H7C350 FTH1P6-201ENST00000430768 320 ntBASIC4.1□□□□□ -1.75
CCDC188H7C350 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC188H7C350 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC188H7C350 SKP1P1-201ENST00000438081 489 ntBASIC4.1□□□□□ -1.75
CCDC188H7C350 RPL23AP33-201ENST00000442301 452 ntBASIC4.1□□□□□ -1.75
CCDC188H7C350 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC188H7C350 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms