Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
TRAV27A0A087WT01 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.87□□□□□ -1.95
TRAV27A0A087WT01 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.87□□□□□ -1.95
TRAV27A0A087WT01 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.87□□□□□ -1.95
TRAV27A0A087WT01 ZNF415P1-201ENST00000582279 1166 ntBASIC2.87□□□□□ -1.95
TRAV27A0A087WT01 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC2.87□□□□□ -1.95
TRAV27A0A087WT01 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.87□□□□□ -1.95
TRAV27A0A087WT01 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC2.87□□□□□ -1.95
TRAV27A0A087WT01 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC2.87□□□□□ -1.95
TRAV27A0A087WT01 AC009464.1-201ENST00000615731 469 ntBASIC2.87□□□□□ -1.95
TRAV27A0A087WT01 AC018816.2-201ENST00000621460 353 ntBASIC2.87□□□□□ -1.95
TRAV27A0A087WT01 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.87□□□□□ -1.95
TRAV27A0A087WT01 AC025125.1-201ENST00000624743 1922 ntBASIC2.87□□□□□ -1.95
TRAV27A0A087WT01 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
TRAV27A0A087WT01 AL161912.2-201ENST00000565707 3007 ntBASIC2.87□□□□□ -1.95
TRAV27A0A087WT01 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.87□□□□□ -1.95
TRAV27A0A087WT01 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
TRAV27A0A087WT01 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.86□□□□□ -1.95
TRAV27A0A087WT01 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
TRAV27A0A087WT01 USP44-208ENST00000552440 1818 ntTSL 5 BASIC2.86□□□□□ -1.95
TRAV27A0A087WT01 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
TRAV27A0A087WT01 USP8P1-201ENST00000494673 3183 ntBASIC2.86□□□□□ -1.95
TRAV27A0A087WT01 AF127577.6-201ENST00000623352 2191 ntBASIC2.86□□□□□ -1.95
TRAV27A0A087WT01 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.86□□□□□ -1.95
TRAV27A0A087WT01 MIR134-201ENST00000385258 73 ntBASIC2.86□□□□□ -1.95
TRAV27A0A087WT01 RNU2-65P-201ENST00000410162 185 ntBASIC2.86□□□□□ -1.95
TRAV27A0A087WT01 AC069218.2-201ENST00000411665 344 ntBASIC2.86□□□□□ -1.95
TRAV27A0A087WT01 AC245054.2-201ENST00000415639 319 ntBASIC2.86□□□□□ -1.95
TRAV27A0A087WT01 AL049610.1-201ENST00000423374 372 ntBASIC2.86□□□□□ -1.95
TRAV27A0A087WT01 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
TRAV27A0A087WT01 MTCO1P52-201ENST00000433928 531 ntBASIC2.86□□□□□ -1.95
TRAV27A0A087WT01 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC2.86□□□□□ -1.95
TRAV27A0A087WT01 AC069540.1-201ENST00000446320 988 ntBASIC2.86□□□□□ -1.95
TRAV27A0A087WT01 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.86□□□□□ -1.95
TRAV27A0A087WT01 AC073522.1-201ENST00000483312 377 ntBASIC2.86□□□□□ -1.95
TRAV27A0A087WT01 AC093278.1-201ENST00000494700 600 ntBASIC2.86□□□□□ -1.95
TRAV27A0A087WT01 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC2.86□□□□□ -1.95
TRAV27A0A087WT01 SOD1P3-201ENST00000518682 454 ntBASIC2.86□□□□□ -1.95
TRAV27A0A087WT01 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.86□□□□□ -1.95
TRAV27A0A087WT01 HIGD1AP10-201ENST00000527837 282 ntBASIC2.86□□□□□ -1.95
TRAV27A0A087WT01 AC011611.1-201ENST00000552179 197 ntBASIC2.86□□□□□ -1.95
TRAV27A0A087WT01 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.86□□□□□ -1.95
TRAV27A0A087WT01 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC2.86□□□□□ -1.95
TRAV27A0A087WT01 AC006270.2-201ENST00000578523 652 ntBASIC2.86□□□□□ -1.95
TRAV27A0A087WT01 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC2.86□□□□□ -1.95
TRAV27A0A087WT01 AL020997.2-201ENST00000602607 184 ntBASIC2.86□□□□□ -1.95
TRAV27A0A087WT01 AC092354.2-201ENST00000607786 514 ntBASIC2.86□□□□□ -1.95
TRAV27A0A087WT01 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC2.86□□□□□ -1.95
TRAV27A0A087WT01 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.86□□□□□ -1.95
TRAV27A0A087WT01 AL450489.1-201ENST00000612071 468 ntBASIC2.86□□□□□ -1.95
TRAV27A0A087WT01 AL354976.1-201ENST00000613843 387 ntBASIC2.86□□□□□ -1.95
TRAV27A0A087WT01 AL161637.1-201ENST00000622380 412 ntBASIC2.86□□□□□ -1.95
TRAV27A0A087WT01 AC138649.5-201ENST00000637456 137 ntBASIC2.86□□□□□ -1.95
TRAV27A0A087WT01 AP001148.1-201ENST00000624124 2359 ntBASIC2.86□□□□□ -1.95
TRAV27A0A087WT01 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC2.85□□□□□ -1.95
TRAV27A0A087WT01 AC093908.1-201ENST00000623125 8092 ntBASIC2.85□□□□□ -1.95
TRAV27A0A087WT01 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.85□□□□□ -1.95
TRAV27A0A087WT01 RNU1-33P-201ENST00000364249 162 ntBASIC2.85□□□□□ -1.95
TRAV27A0A087WT01 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
TRAV27A0A087WT01 SNORA46-201ENST00000384762 135 ntBASIC2.85□□□□□ -1.95
TRAV27A0A087WT01 PTMAP2-201ENST00000397627 327 ntBASIC2.85□□□□□ -1.95
TRAV27A0A087WT01 MTCO3P31-201ENST00000405526 789 ntBASIC2.85□□□□□ -1.95
TRAV27A0A087WT01 AL583834.1-201ENST00000406943 343 ntBASIC2.85□□□□□ -1.95
TRAV27A0A087WT01 RNU2-37P-201ENST00000410695 177 ntBASIC2.85□□□□□ -1.95
TRAV27A0A087WT01 AC007390.1-201ENST00000415722 356 ntBASIC2.85□□□□□ -1.95
TRAV27A0A087WT01 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.85□□□□□ -1.95
TRAV27A0A087WT01 RPF2P1-201ENST00000424137 906 ntBASIC2.85□□□□□ -1.95
TRAV27A0A087WT01 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC2.85□□□□□ -1.95
TRAV27A0A087WT01 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.85□□□□□ -1.95
TRAV27A0A087WT01 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC2.85□□□□□ -1.95
TRAV27A0A087WT01 AC005019.1-201ENST00000436455 431 ntBASIC2.85□□□□□ -1.95
TRAV27A0A087WT01 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
TRAV27A0A087WT01 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
TRAV27A0A087WT01 CYCSP35-201ENST00000451978 304 ntBASIC2.85□□□□□ -1.95
TRAV27A0A087WT01 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC2.85□□□□□ -1.95
TRAV27A0A087WT01 RN7SL330P-201ENST00000469709 307 ntBASIC2.85□□□□□ -1.95
TRAV27A0A087WT01 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC2.85□□□□□ -1.95
TRAV27A0A087WT01 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC2.85□□□□□ -1.95
TRAV27A0A087WT01 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
TRAV27A0A087WT01 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.85□□□□□ -1.95
TRAV27A0A087WT01 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.85□□□□□ -1.95
TRAV27A0A087WT01 MTCO1P30-201ENST00000515244 580 ntBASIC2.85□□□□□ -1.95
TRAV27A0A087WT01 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC2.85□□□□□ -1.95
TRAV27A0A087WT01 UBE2NP1-201ENST00000545592 458 ntBASIC2.85□□□□□ -1.95
TRAV27A0A087WT01 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.85□□□□□ -1.95
TRAV27A0A087WT01 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
TRAV27A0A087WT01 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC2.85□□□□□ -1.95
TRAV27A0A087WT01 AC100793.4-201ENST00000613683 429 ntBASIC2.85□□□□□ -1.95
TRAV27A0A087WT01 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
TRAV27A0A087WT01 DCAF13P3-201ENST00000561147 1334 ntBASIC2.85□□□□□ -1.95
TRAV27A0A087WT01 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
TRAV27A0A087WT01 AL133383.2-201ENST00000622958 2336 ntBASIC2.85□□□□□ -1.95
TRAV27A0A087WT01 POMP-202ENST00000460403 1428 ntTSL 3 BASIC2.85□□□□□ -1.95
TRAV27A0A087WT01 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
TRAV27A0A087WT01 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
TRAV27A0A087WT01 SNORA62.3-201ENST00000365110 153 ntBASIC2.84□□□□□ -1.95
TRAV27A0A087WT01 AC234772.1-201ENST00000377927 937 ntBASIC2.84□□□□□ -1.95
TRAV27A0A087WT01 SNORA70E-201ENST00000384492 135 ntBASIC2.84□□□□□ -1.95
TRAV27A0A087WT01 RPL21P3-201ENST00000395517 478 ntBASIC2.84□□□□□ -1.95
TRAV27A0A087WT01 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms