Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 AL360182.1-201ENST00000397433 468 ntBASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 MRPL42P3-201ENST00000401492 326 ntBASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 AL049697.2-201ENST00000403708 294 ntBASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 MIR1266-201ENST00000408125 84 ntBASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 RNU6-387P-201ENST00000411331 105 ntBASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 BX323014.1-201ENST00000412876 237 ntBASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 EZH2P1-201ENST00000431167 291 ntBASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 AL645939.3-201ENST00000435408 225 ntBASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 AL353691.1-201ENST00000451332 387 ntBASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 AC011225.1-201ENST00000457751 369 ntBASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 AP003385.3-201ENST00000472498 287 ntBASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 CCDC34P1-201ENST00000507441 517 ntBASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 SNORA25.10-201ENST00000515926 124 ntBASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 RNU4ATAC7P-201ENST00000516280 125 ntBASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 AC060775.1-201ENST00000518241 520 ntBASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 AC131935.1-201ENST00000524621 333 ntBASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 AL133153.1-201ENST00000557756 303 ntBASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 AC010653.1-201ENST00000571108 881 ntBASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 AC023043.2-201ENST00000589678 1026 ntBASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 AC009779.8-202ENST00000607990 932 ntBASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 AC024255.1-201ENST00000614376 102 ntBASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 AC123768.4-201ENST00000616244 701 ntBASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 AL357559.1-201ENST00000622228 274 ntBASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 LINC02495-203ENST00000636704 242 ntBASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 PAPPA-AS1-201ENST00000445861 2450 ntBASIC6.17□□□□□ -1.42
PCDHGA11Q9Y5H2 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 FANCD2P2-201ENST00000437591 1400 ntBASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 Y_RNA.193-201ENST00000363979 102 ntBASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 RNU6-593P-201ENST00000364716 112 ntBASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 RNU6-1032P-201ENST00000384100 107 ntBASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 MIR548F4-201ENST00000408515 105 ntBASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 RN7SKP221-201ENST00000410420 301 ntBASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 UBE2V1P14-201ENST00000415815 558 ntBASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 AC083862.1-201ENST00000427378 1242 ntBASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 AL451139.1-201ENST00000434718 346 ntBASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 GAPDHP37-201ENST00000442317 968 ntBASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 AC020550.1-201ENST00000447385 163 ntBASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 MTND1P17-201ENST00000448961 204 ntBASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 RPL36AP13-201ENST00000457490 317 ntBASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 SNORD97-201ENST00000459187 142 ntBASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 RPL7P43-201ENST00000478876 753 ntBASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 RN7SL413P-201ENST00000482700 297 ntBASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 AC104806.1-201ENST00000508720 308 ntBASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 AC002456.2-201ENST00000509356 380 ntBASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 IGKV1OR2-1-201ENST00000514060 354 ntBASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 GAPDHP62-201ENST00000515313 990 ntBASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 RNU6-764P-201ENST00000516396 105 ntBASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 AL161670.1-201ENST00000554348 137 ntBASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 AC005341.1-201ENST00000571086 708 ntBASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 MIR3159-201ENST00000584572 74 ntBASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 IGKV1OR2-118-201ENST00000603238 347 ntBASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 AL162377.2-201ENST00000624532 337 ntBASIC6.16□□□□□ -1.42
PCDHGA11Q9Y5H2 Z69720.2-201ENST00000624755 279 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms