Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC7.07□□□□□ -1.28
ZC3H4Q9UPT8 AC006548.1-201ENST00000427470 102 ntBASIC7.07□□□□□ -1.28
ZC3H4Q9UPT8 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC7.07□□□□□ -1.28
ZC3H4Q9UPT8 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC7.07□□□□□ -1.28
ZC3H4Q9UPT8 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC7.07□□□□□ -1.28
ZC3H4Q9UPT8 AC006512.1-201ENST00000468816 291 ntBASIC7.07□□□□□ -1.28
ZC3H4Q9UPT8 AC006463.2-201ENST00000473326 348 ntBASIC7.07□□□□□ -1.28
ZC3H4Q9UPT8 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC7.07□□□□□ -1.28
ZC3H4Q9UPT8 RPS27AP18-201ENST00000515536 459 ntBASIC7.07□□□□□ -1.28
ZC3H4Q9UPT8 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC7.07□□□□□ -1.28
ZC3H4Q9UPT8 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC7.07□□□□□ -1.28
ZC3H4Q9UPT8 BNIP3P6-201ENST00000549284 499 ntBASIC7.07□□□□□ -1.28
ZC3H4Q9UPT8 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC7.07□□□□□ -1.28
ZC3H4Q9UPT8 MIR4330-201ENST00000579077 105 ntBASIC7.07□□□□□ -1.28
ZC3H4Q9UPT8 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
ZC3H4Q9UPT8 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC7.07□□□□□ -1.28
ZC3H4Q9UPT8 AC019193.3-201ENST00000609144 554 ntBASIC7.07□□□□□ -1.28
ZC3H4Q9UPT8 CR381572.1-201ENST00000625098 102 ntBASIC7.07□□□□□ -1.28
ZC3H4Q9UPT8 AC119674.1-207ENST00000641355 633 ntBASIC7.07□□□□□ -1.28
ZC3H4Q9UPT8 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
ZC3H4Q9UPT8 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
ZC3H4Q9UPT8 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
ZC3H4Q9UPT8 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC7.07□□□□□ -1.28
ZC3H4Q9UPT8 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
ZC3H4Q9UPT8 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC7.07□□□□□ -1.28
ZC3H4Q9UPT8 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
ZC3H4Q9UPT8 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC7.07□□□□□ -1.28
ZC3H4Q9UPT8 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC7.07□□□□□ -1.28
ZC3H4Q9UPT8 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 RNU6-996P-201ENST00000365438 107 ntBASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 RNU6-1105P-201ENST00000384774 107 ntBASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 AL583835.1-201ENST00000399570 407 ntBASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 Y_RNA.615-201ENST00000410769 117 ntBASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 PRELID3BP11-201ENST00000414230 479 ntBASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 RPS11P7-201ENST00000442125 465 ntBASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 FHP1-201ENST00000442741 703 ntBASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 MTND5P22-201ENST00000458380 195 ntBASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 KLHL2P1-201ENST00000508691 521 ntBASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 AC005741.1-201ENST00000511094 432 ntBASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 NPM1P42-201ENST00000560329 862 ntBASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 MIR3189-201ENST00000578735 73 ntBASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 RNU4ATAC-201ENST00000580972 127 ntBASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 AC098848.2-201ENST00000588023 330 ntBASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 VN1R84P-201ENST00000593697 235 ntBASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 XIAPP1-201ENST00000603162 600 ntBASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 DPPA3P3-201ENST00000603842 430 ntBASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 AL355472.4-201ENST00000610233 626 ntBASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 AL138960.1-201ENST00000613838 513 ntBASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 AC022106.2-201ENST00000620114 757 ntBASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 AP002799.1-201ENST00000623552 423 ntBASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 AL133216.2-202ENST00000634512 349 ntBASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
ZC3H4Q9UPT8 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 AC007159.1-201ENST00000566529 4706 ntBASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 RPL23P2-201ENST00000320371 421 ntBASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 Y_RNA.133-201ENST00000363428 110 ntBASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 RNU4-1-201ENST00000363925 141 ntBASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 RNA5SP211-201ENST00000365516 117 ntBASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 SNORA22B-201ENST00000383876 138 ntBASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 Y_RNA.401-201ENST00000383965 117 ntBASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 U3.23-201ENST00000391132 200 ntBASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 AC016397.1-201ENST00000412463 242 ntBASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 EIF4EBP2P1-201ENST00000450009 343 ntBASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 PABPC1P3-201ENST00000469174 459 ntBASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 AC104563.1-201ENST00000476147 376 ntBASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 RNU6-488P-201ENST00000515918 99 ntBASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms