Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 AL591848.4-201ENST00000567832 3472 ntBASIC8.27□□□□□ -1.09
TRIM35Q9UPQ4 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 AC002525.1-201ENST00000624392 1622 ntBASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 AC022507.1-201ENST00000548349 1505 ntBASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 RNU6-858P-201ENST00000362436 107 ntBASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 RNU6-1266P-201ENST00000362794 105 ntBASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 RNA5SP346-201ENST00000363541 121 ntBASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 RNU6-611P-201ENST00000384276 104 ntBASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 HMGB1P20-201ENST00000402555 677 ntBASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 AL359643.1-201ENST00000404109 423 ntBASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 AC233981.1-201ENST00000423224 461 ntBASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 RPL7P37-201ENST00000425095 738 ntBASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 AC093655.2-201ENST00000425735 631 ntBASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 MRPS18BP2-201ENST00000434310 759 ntBASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 RPL21P71-201ENST00000465598 459 ntBASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 FTH1P2-201ENST00000466086 412 ntBASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 AC109925.1-201ENST00000478069 331 ntBASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 RPS27P20-201ENST00000492051 246 ntBASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 AKIRIN2P1-201ENST00000505898 352 ntBASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 RNA5SP441-201ENST00000516809 88 ntBASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 SULT1C2P1-202ENST00000562418 459 ntBASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 AC004584.2-201ENST00000570407 410 ntBASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 MIR3189-201ENST00000578735 73 ntBASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 FAM106CP-201ENST00000582212 507 ntBASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 AL353997.4-201ENST00000586196 166 ntBASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 AC123768.4-201ENST00000616244 701 ntBASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 MIR6811-201ENST00000620409 58 ntBASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 LINC02019-201ENST00000608605 2060 ntBASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 TMCC1P1-201ENST00000518897 1980 ntBASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 AC074029.4-201ENST00000624796 1859 ntBASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
TRIM35Q9UPQ4 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC8.25□□□□□ -1.09
TRIM35Q9UPQ4 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
TRIM35Q9UPQ4 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
TRIM35Q9UPQ4 AC023421.1-201ENST00000590535 1785 ntBASIC8.25□□□□□ -1.09
TRIM35Q9UPQ4 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC8.25□□□□□ -1.09
TRIM35Q9UPQ4 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
TRIM35Q9UPQ4 AC009313.2-201ENST00000417893 1941 ntBASIC8.25□□□□□ -1.09
TRIM35Q9UPQ4 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC8.25□□□□□ -1.09
TRIM35Q9UPQ4 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
TRIM35Q9UPQ4 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
TRIM35Q9UPQ4 RNA5SP333-201ENST00000363466 118 ntBASIC8.25□□□□□ -1.09
TRIM35Q9UPQ4 Y_RNA.183-201ENST00000363882 113 ntBASIC8.25□□□□□ -1.09
TRIM35Q9UPQ4 RNA5SP232-201ENST00000364144 119 ntBASIC8.25□□□□□ -1.09
TRIM35Q9UPQ4 RNA5SP334-201ENST00000364825 118 ntBASIC8.25□□□□□ -1.09
TRIM35Q9UPQ4 ALDH7A1P4-201ENST00000412255 178 ntBASIC8.25□□□□□ -1.09
TRIM35Q9UPQ4 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC8.25□□□□□ -1.09
TRIM35Q9UPQ4 AL445305.1-201ENST00000432577 575 ntBASIC8.25□□□□□ -1.09
TRIM35Q9UPQ4 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC8.25□□□□□ -1.09
TRIM35Q9UPQ4 AC114495.1-201ENST00000441274 436 ntBASIC8.25□□□□□ -1.09
TRIM35Q9UPQ4 NOTCH2P1-201ENST00000443481 624 ntBASIC8.25□□□□□ -1.09
TRIM35Q9UPQ4 POU5F1P5-201ENST00000445059 658 ntBASIC8.25□□□□□ -1.09
TRIM35Q9UPQ4 AC093166.3-201ENST00000448785 303 ntBASIC8.25□□□□□ -1.09
TRIM35Q9UPQ4 TPT1P12-201ENST00000448968 492 ntBASIC8.25□□□□□ -1.09
TRIM35Q9UPQ4 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC8.25□□□□□ -1.09
TRIM35Q9UPQ4 RN7SL326P-201ENST00000477493 296 ntBASIC8.25□□□□□ -1.09
TRIM35Q9UPQ4 AC005017.1-201ENST00000482002 490 ntBASIC8.25□□□□□ -1.09
TRIM35Q9UPQ4 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC8.25□□□□□ -1.09
TRIM35Q9UPQ4 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC8.25□□□□□ -1.09
TRIM35Q9UPQ4 MED21-206ENST00000546323 575 ntTSL 3 BASIC8.25□□□□□ -1.09
TRIM35Q9UPQ4 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC8.25□□□□□ -1.09
TRIM35Q9UPQ4 AC027229.1-201ENST00000583887 253 ntBASIC8.25□□□□□ -1.09
TRIM35Q9UPQ4 MIR5692C1-201ENST00000585309 91 ntBASIC8.25□□□□□ -1.09
TRIM35Q9UPQ4 AC008687.2-201ENST00000597865 520 ntBASIC8.25□□□□□ -1.09
TRIM35Q9UPQ4 SMIM12P1-201ENST00000603004 274 ntBASIC8.25□□□□□ -1.09
TRIM35Q9UPQ4 AL390123.1-201ENST00000603216 237 ntBASIC8.25□□□□□ -1.09
TRIM35Q9UPQ4 AC090525.3-201ENST00000605601 189 ntBASIC8.25□□□□□ -1.09
TRIM35Q9UPQ4 U6.101-201ENST00000637707 76 ntBASIC8.25□□□□□ -1.09
TRIM35Q9UPQ4 SALL4P7-201ENST00000555779 3120 ntBASIC8.25□□□□□ -1.09
TRIM35Q9UPQ4 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC8.25□□□□□ -1.09
TRIM35Q9UPQ4 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
TRIM35Q9UPQ4 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
TRIM35Q9UPQ4 Z95327.2-201ENST00000414579 1873 ntBASIC8.25□□□□□ -1.09
TRIM35Q9UPQ4 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
TRIM35Q9UPQ4 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
TRIM35Q9UPQ4 AC008957.3-201ENST00000624112 2242 ntBASIC8.25□□□□□ -1.09
TRIM35Q9UPQ4 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
TRIM35Q9UPQ4 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms