Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 AC123768.4-201ENST00000616244 701 ntBASIC3.79□□□□□ -1.8
UBQLN1Q9UMX0 AC097372.4-201ENST00000625025 466 ntBASIC3.79□□□□□ -1.8
UBQLN1Q9UMX0 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.79□□□□□ -1.8
UBQLN1Q9UMX0 OR6C71P-202ENST00000641886 1107 ntBASIC3.79□□□□□ -1.8
UBQLN1Q9UMX0 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.79□□□□□ -1.8
UBQLN1Q9UMX0 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
UBQLN1Q9UMX0 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.79□□□□□ -1.8
UBQLN1Q9UMX0 NMD3P1-201ENST00000439704 1488 ntBASIC3.79□□□□□ -1.8
UBQLN1Q9UMX0 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
UBQLN1Q9UMX0 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
UBQLN1Q9UMX0 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
UBQLN1Q9UMX0 RNA5SP322-201ENST00000363617 119 ntBASIC3.78□□□□□ -1.8
UBQLN1Q9UMX0 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.78□□□□□ -1.8
UBQLN1Q9UMX0 RNU6-1279P-201ENST00000383917 103 ntBASIC3.78□□□□□ -1.8
UBQLN1Q9UMX0 MTND4P22-201ENST00000413116 1169 ntBASIC3.78□□□□□ -1.8
UBQLN1Q9UMX0 MTND4P11-201ENST00000417020 1058 ntBASIC3.78□□□□□ -1.8
UBQLN1Q9UMX0 RPL34P26-201ENST00000445636 354 ntBASIC3.78□□□□□ -1.8
UBQLN1Q9UMX0 RPL23AP23-201ENST00000452590 471 ntBASIC3.78□□□□□ -1.8
UBQLN1Q9UMX0 PRSS3P4-201ENST00000453323 162 ntBASIC3.78□□□□□ -1.8
UBQLN1Q9UMX0 RPL7P49-201ENST00000471402 708 ntBASIC3.78□□□□□ -1.8
UBQLN1Q9UMX0 AC025518.1-201ENST00000479856 347 ntBASIC3.78□□□□□ -1.8
UBQLN1Q9UMX0 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
UBQLN1Q9UMX0 AC026784.1-201ENST00000507986 352 ntBASIC3.78□□□□□ -1.8
UBQLN1Q9UMX0 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.78□□□□□ -1.8
UBQLN1Q9UMX0 SNORA76.2-201ENST00000517095 137 ntBASIC3.78□□□□□ -1.8
UBQLN1Q9UMX0 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.78□□□□□ -1.8
UBQLN1Q9UMX0 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.78□□□□□ -1.8
UBQLN1Q9UMX0 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.78□□□□□ -1.8
UBQLN1Q9UMX0 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.78□□□□□ -1.8
UBQLN1Q9UMX0 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.78□□□□□ -1.8
UBQLN1Q9UMX0 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.78□□□□□ -1.8
UBQLN1Q9UMX0 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.78□□□□□ -1.8
UBQLN1Q9UMX0 RN7SL339P-201ENST00000580597 296 ntBASIC3.78□□□□□ -1.8
UBQLN1Q9UMX0 AP001033.2-201ENST00000609701 1003 ntBASIC3.78□□□□□ -1.8
UBQLN1Q9UMX0 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
UBQLN1Q9UMX0 AL355365.1-201ENST00000616480 294 ntBASIC3.78□□□□□ -1.8
UBQLN1Q9UMX0 MIR7975-201ENST00000619350 68 ntBASIC3.78□□□□□ -1.8
UBQLN1Q9UMX0 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.78□□□□□ -1.8
UBQLN1Q9UMX0 AC015726.3-201ENST00000624501 418 ntBASIC3.78□□□□□ -1.8
UBQLN1Q9UMX0 FRG1DP-201ENST00000635586 771 ntBASIC3.78□□□□□ -1.8
UBQLN1Q9UMX0 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.78□□□□□ -1.8
UBQLN1Q9UMX0 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
UBQLN1Q9UMX0 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
UBQLN1Q9UMX0 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
UBQLN1Q9UMX0 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
UBQLN1Q9UMX0 AL133412.1-201ENST00000380194 2992 ntBASIC3.78□□□□□ -1.81
UBQLN1Q9UMX0 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
UBQLN1Q9UMX0 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
UBQLN1Q9UMX0 PRO1804-201ENST00000623780 2050 ntBASIC3.77□□□□□ -1.81
UBQLN1Q9UMX0 AL118496.1-201ENST00000440201 1812 ntBASIC3.77□□□□□ -1.81
UBQLN1Q9UMX0 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
UBQLN1Q9UMX0 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.77□□□□□ -1.81
UBQLN1Q9UMX0 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
UBQLN1Q9UMX0 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
UBQLN1Q9UMX0 RNU4-35P-201ENST00000362588 141 ntBASIC3.77□□□□□ -1.81
UBQLN1Q9UMX0 RNA5SP72-201ENST00000364442 117 ntBASIC3.77□□□□□ -1.81
UBQLN1Q9UMX0 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
UBQLN1Q9UMX0 MIR490-201ENST00000384865 128 ntBASIC3.77□□□□□ -1.81
UBQLN1Q9UMX0 SNORD17-201ENST00000390930 237 ntBASIC3.77□□□□□ -1.81
UBQLN1Q9UMX0 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.77□□□□□ -1.81
UBQLN1Q9UMX0 AC114814.2-201ENST00000419195 485 ntBASIC3.77□□□□□ -1.81
UBQLN1Q9UMX0 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.77□□□□□ -1.81
UBQLN1Q9UMX0 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.77□□□□□ -1.81
UBQLN1Q9UMX0 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.77□□□□□ -1.81
UBQLN1Q9UMX0 AC084357.1-201ENST00000473404 255 ntBASIC3.77□□□□□ -1.81
UBQLN1Q9UMX0 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.77□□□□□ -1.81
UBQLN1Q9UMX0 SETP14-201ENST00000497538 873 ntBASIC3.77□□□□□ -1.81
UBQLN1Q9UMX0 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.77□□□□□ -1.81
UBQLN1Q9UMX0 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.77□□□□□ -1.81
UBQLN1Q9UMX0 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.77□□□□□ -1.81
UBQLN1Q9UMX0 AC010468.3-201ENST00000508225 458 ntBASIC3.77□□□□□ -1.81
UBQLN1Q9UMX0 RNU6-1102P-201ENST00000516149 96 ntBASIC3.77□□□□□ -1.81
UBQLN1Q9UMX0 MIR2114-201ENST00000516645 80 ntBASIC3.77□□□□□ -1.81
UBQLN1Q9UMX0 NARSP2-201ENST00000518524 679 ntBASIC3.77□□□□□ -1.81
UBQLN1Q9UMX0 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.77□□□□□ -1.81
UBQLN1Q9UMX0 AC025918.2-201ENST00000558683 763 ntBASIC3.77□□□□□ -1.81
UBQLN1Q9UMX0 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.77□□□□□ -1.81
UBQLN1Q9UMX0 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.77□□□□□ -1.81
UBQLN1Q9UMX0 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.77□□□□□ -1.81
UBQLN1Q9UMX0 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
UBQLN1Q9UMX0 VN1R84P-201ENST00000593697 235 ntBASIC3.77□□□□□ -1.81
UBQLN1Q9UMX0 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.77□□□□□ -1.81
UBQLN1Q9UMX0 ZNF92P2-201ENST00000600543 1059 ntBASIC3.77□□□□□ -1.81
UBQLN1Q9UMX0 AL512506.1-201ENST00000613918 449 ntBASIC3.77□□□□□ -1.81
UBQLN1Q9UMX0 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
UBQLN1Q9UMX0 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
UBQLN1Q9UMX0 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
UBQLN1Q9UMX0 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.77□□□□□ -1.81
UBQLN1Q9UMX0 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
UBQLN1Q9UMX0 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.77□□□□□ -1.81
UBQLN1Q9UMX0 AP001486.2-201ENST00000561652 5113 ntBASIC3.77□□□□□ -1.81
UBQLN1Q9UMX0 OTUD4P1-201ENST00000237841 3067 ntBASIC3.76□□□□□ -1.81
UBQLN1Q9UMX0 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.76□□□□□ -1.81
UBQLN1Q9UMX0 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.76□□□□□ -1.81
UBQLN1Q9UMX0 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
UBQLN1Q9UMX0 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.76□□□□□ -1.81
UBQLN1Q9UMX0 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.76□□□□□ -1.81
UBQLN1Q9UMX0 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
UBQLN1Q9UMX0 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
UBQLN1Q9UMX0 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms