Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS45Q9NRW7 AL162591.2-201ENST00000449634 317 ntBASIC4.85□□□□□ -1.63
VPS45Q9NRW7 RFC5P1-201ENST00000454419 874 ntBASIC4.85□□□□□ -1.63
VPS45Q9NRW7 RPL7P18-201ENST00000478965 734 ntBASIC4.85□□□□□ -1.63
VPS45Q9NRW7 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS45Q9NRW7 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.85□□□□□ -1.63
VPS45Q9NRW7 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS45Q9NRW7 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS45Q9NRW7 AC111000.2-201ENST00000507775 550 ntBASIC4.85□□□□□ -1.63
VPS45Q9NRW7 MTCYBP16-201ENST00000509187 1129 ntBASIC4.85□□□□□ -1.63
VPS45Q9NRW7 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VPS45Q9NRW7 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS45Q9NRW7 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.85□□□□□ -1.63
VPS45Q9NRW7 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS45Q9NRW7 AC022882.1-201ENST00000532142 501 ntBASIC4.85□□□□□ -1.63
VPS45Q9NRW7 AC005832.3-201ENST00000537929 631 ntBASIC4.85□□□□□ -1.63
VPS45Q9NRW7 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.85□□□□□ -1.63
VPS45Q9NRW7 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.85□□□□□ -1.63
VPS45Q9NRW7 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.85□□□□□ -1.63
VPS45Q9NRW7 AC023575.1-201ENST00000580510 358 ntBASIC4.85□□□□□ -1.63
VPS45Q9NRW7 KPNA2P3-201ENST00000584190 848 ntBASIC4.85□□□□□ -1.63
VPS45Q9NRW7 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.85□□□□□ -1.63
VPS45Q9NRW7 AL390838.2-201ENST00000602394 274 ntBASIC4.85□□□□□ -1.63
VPS45Q9NRW7 AC105129.3-201ENST00000605455 485 ntBASIC4.85□□□□□ -1.63
VPS45Q9NRW7 AC124312.4-201ENST00000605533 310 ntBASIC4.85□□□□□ -1.63
VPS45Q9NRW7 AC105429.2-201ENST00000610567 517 ntBASIC4.85□□□□□ -1.63
VPS45Q9NRW7 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
VPS45Q9NRW7 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.85□□□□□ -1.63
VPS45Q9NRW7 Z99496.1-201ENST00000469424 1477 ntBASIC4.85□□□□□ -1.63
VPS45Q9NRW7 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
VPS45Q9NRW7 IQCB2P-201ENST00000401788 1633 ntBASIC4.85□□□□□ -1.63
VPS45Q9NRW7 AC090229.1-201ENST00000590983 1609 ntBASIC4.85□□□□□ -1.63
VPS45Q9NRW7 LINC01355-201ENST00000566551 5444 ntBASIC4.85□□□□□ -1.63
VPS45Q9NRW7 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VPS45Q9NRW7 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VPS45Q9NRW7 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
VPS45Q9NRW7 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.85□□□□□ -1.63
VPS45Q9NRW7 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
VPS45Q9NRW7 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
VPS45Q9NRW7 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
VPS45Q9NRW7 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
VPS45Q9NRW7 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VPS45Q9NRW7 ELL2P3-201ENST00000457883 1602 ntBASIC4.84□□□□□ -1.63
VPS45Q9NRW7 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VPS45Q9NRW7 DCAF13P3-201ENST00000561147 1334 ntBASIC4.84□□□□□ -1.63
VPS45Q9NRW7 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
VPS45Q9NRW7 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VPS45Q9NRW7 IL6STP1-201ENST00000346911 1020 ntBASIC4.84□□□□□ -1.63
VPS45Q9NRW7 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VPS45Q9NRW7 RNU6-582P-201ENST00000362989 107 ntBASIC4.84□□□□□ -1.63
VPS45Q9NRW7 Y_RNA.318-201ENST00000365131 97 ntBASIC4.84□□□□□ -1.63
VPS45Q9NRW7 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
VPS45Q9NRW7 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.84□□□□□ -1.63
VPS45Q9NRW7 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.84□□□□□ -1.63
VPS45Q9NRW7 AC118469.1-201ENST00000442943 488 ntBASIC4.84□□□□□ -1.63
VPS45Q9NRW7 MTND2P4-201ENST00000445034 1004 ntBASIC4.84□□□□□ -1.63
VPS45Q9NRW7 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.84□□□□□ -1.63
VPS45Q9NRW7 RPL31P3-201ENST00000458430 332 ntBASIC4.84□□□□□ -1.63
VPS45Q9NRW7 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.84□□□□□ -1.63
VPS45Q9NRW7 AC109327.1-201ENST00000471666 403 ntBASIC4.84□□□□□ -1.63
VPS45Q9NRW7 AC087879.1-201ENST00000474343 374 ntBASIC4.84□□□□□ -1.63
VPS45Q9NRW7 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
VPS45Q9NRW7 RPL21P129-201ENST00000491732 478 ntBASIC4.84□□□□□ -1.63
VPS45Q9NRW7 SCARNA22-201ENST00000503991 125 ntBASIC4.84□□□□□ -1.63
VPS45Q9NRW7 AC091435.1-201ENST00000505442 584 ntBASIC4.84□□□□□ -1.63
VPS45Q9NRW7 AC021146.8-201ENST00000507455 733 ntBASIC4.84□□□□□ -1.63
VPS45Q9NRW7 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.84□□□□□ -1.63
VPS45Q9NRW7 AC010587.2-201ENST00000511727 448 ntBASIC4.84□□□□□ -1.63
VPS45Q9NRW7 AC018797.3-201ENST00000513388 1241 ntBASIC4.84□□□□□ -1.63
VPS45Q9NRW7 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC4.84□□□□□ -1.63
VPS45Q9NRW7 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.84□□□□□ -1.63
VPS45Q9NRW7 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.84□□□□□ -1.63
VPS45Q9NRW7 AC133555.2-201ENST00000550213 292 ntBASIC4.84□□□□□ -1.63
VPS45Q9NRW7 AC084824.1-201ENST00000550917 1005 ntBASIC4.84□□□□□ -1.63
VPS45Q9NRW7 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.84□□□□□ -1.63
VPS45Q9NRW7 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.84□□□□□ -1.63
VPS45Q9NRW7 AC087477.6-201ENST00000559595 843 ntBASIC4.84□□□□□ -1.63
VPS45Q9NRW7 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.84□□□□□ -1.63
VPS45Q9NRW7 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.84□□□□□ -1.63
VPS45Q9NRW7 AC093249.4-201ENST00000564755 259 ntBASIC4.84□□□□□ -1.63
VPS45Q9NRW7 AP005136.1-201ENST00000579765 429 ntBASIC4.84□□□□□ -1.63
VPS45Q9NRW7 RN7SL176P-201ENST00000580352 264 ntBASIC4.84□□□□□ -1.63
VPS45Q9NRW7 AC146944.4-201ENST00000602697 718 ntBASIC4.84□□□□□ -1.63
VPS45Q9NRW7 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.84□□□□□ -1.63
VPS45Q9NRW7 FAM27B-201ENST00000610601 213 ntBASIC4.84□□□□□ -1.63
VPS45Q9NRW7 AC122133.1-201ENST00000613964 233 ntBASIC4.84□□□□□ -1.63
VPS45Q9NRW7 AC011944.2-201ENST00000624440 683 ntBASIC4.84□□□□□ -1.63
VPS45Q9NRW7 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.84□□□□□ -1.63
VPS45Q9NRW7 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
VPS45Q9NRW7 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.84□□□□□ -1.64
VPS45Q9NRW7 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
VPS45Q9NRW7 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
VPS45Q9NRW7 AL445487.1-201ENST00000415694 1580 ntBASIC4.83□□□□□ -1.64
VPS45Q9NRW7 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VPS45Q9NRW7 OR56B2P-202ENST00000641377 2453 ntBASIC4.83□□□□□ -1.64
VPS45Q9NRW7 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VPS45Q9NRW7 AL445523.1-201ENST00000451184 1362 ntBASIC4.83□□□□□ -1.64
VPS45Q9NRW7 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VPS45Q9NRW7 ZNF542P-204ENST00000482727 1305 ntBASIC4.83□□□□□ -1.64
VPS45Q9NRW7 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 158 ms