Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
VTA1Q9NP79 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VTA1Q9NP79 SOCS5P3-201ENST00000425115 1576 ntBASIC5.35□□□□□ -1.55
VTA1Q9NP79 MTCO1P14-201ENST00000441695 1559 ntBASIC5.35□□□□□ -1.55
VTA1Q9NP79 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.35□□□□□ -1.55
VTA1Q9NP79 AC009643.2-201ENST00000603543 1448 ntBASIC5.35□□□□□ -1.55
VTA1Q9NP79 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC5.35□□□□□ -1.55
VTA1Q9NP79 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VTA1Q9NP79 AL121657.1-201ENST00000327215 531 ntBASIC5.35□□□□□ -1.55
VTA1Q9NP79 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
VTA1Q9NP79 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VTA1Q9NP79 U3.4-201ENST00000363352 213 ntBASIC5.35□□□□□ -1.55
VTA1Q9NP79 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VTA1Q9NP79 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VTA1Q9NP79 AC004690.1-201ENST00000418216 328 ntBASIC5.35□□□□□ -1.55
VTA1Q9NP79 AC013429.2-201ENST00000418798 781 ntBASIC5.35□□□□□ -1.55
VTA1Q9NP79 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.35□□□□□ -1.55
VTA1Q9NP79 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC5.35□□□□□ -1.55
VTA1Q9NP79 RPEP3-201ENST00000425462 676 ntBASIC5.35□□□□□ -1.55
VTA1Q9NP79 MTCO3P30-201ENST00000426425 670 ntBASIC5.35□□□□□ -1.55
VTA1Q9NP79 RPS26P47-201ENST00000427219 348 ntBASIC5.35□□□□□ -1.55
VTA1Q9NP79 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC5.35□□□□□ -1.55
VTA1Q9NP79 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC5.35□□□□□ -1.55
VTA1Q9NP79 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC5.35□□□□□ -1.55
VTA1Q9NP79 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.35□□□□□ -1.55
VTA1Q9NP79 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC5.35□□□□□ -1.55
VTA1Q9NP79 AL512286.1-201ENST00000439244 400 ntBASIC5.35□□□□□ -1.55
VTA1Q9NP79 H2AFZP5-201ENST00000446960 382 ntBASIC5.35□□□□□ -1.55
VTA1Q9NP79 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC5.35□□□□□ -1.55
VTA1Q9NP79 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.35□□□□□ -1.55
VTA1Q9NP79 TRGVB-201ENST00000453257 471 ntBASIC5.35□□□□□ -1.55
VTA1Q9NP79 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.35□□□□□ -1.55
VTA1Q9NP79 AC079168.2-201ENST00000453977 416 ntBASIC5.35□□□□□ -1.55
VTA1Q9NP79 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.35□□□□□ -1.55
VTA1Q9NP79 APOOP2-201ENST00000461561 539 ntBASIC5.35□□□□□ -1.55
VTA1Q9NP79 AC010683.1-201ENST00000473673 378 ntBASIC5.35□□□□□ -1.55
VTA1Q9NP79 MTND6P6-201ENST00000478031 263 ntBASIC5.35□□□□□ -1.55
VTA1Q9NP79 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.35□□□□□ -1.55
VTA1Q9NP79 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC5.35□□□□□ -1.55
VTA1Q9NP79 AC068724.1-201ENST00000487100 792 ntBASIC5.35□□□□□ -1.55
VTA1Q9NP79 AC013356.1-201ENST00000489027 564 ntBASIC5.35□□□□□ -1.55
VTA1Q9NP79 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC5.35□□□□□ -1.55
VTA1Q9NP79 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.35□□□□□ -1.55
VTA1Q9NP79 HSPE1P3-201ENST00000559254 309 ntBASIC5.35□□□□□ -1.55
VTA1Q9NP79 AC018552.3-201ENST00000567416 561 ntBASIC5.35□□□□□ -1.55
VTA1Q9NP79 MIR5186-201ENST00000577504 120 ntBASIC5.35□□□□□ -1.55
VTA1Q9NP79 AC069061.3-201ENST00000582254 823 ntBASIC5.35□□□□□ -1.55
VTA1Q9NP79 MIR4637-201ENST00000582405 84 ntBASIC5.35□□□□□ -1.55
VTA1Q9NP79 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.35□□□□□ -1.55
VTA1Q9NP79 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC5.35□□□□□ -1.55
VTA1Q9NP79 RSL24D1P11-201ENST00000591045 491 ntBASIC5.35□□□□□ -1.55
VTA1Q9NP79 DLEU1_2.1-201ENST00000617920 342 ntBASIC5.35□□□□□ -1.55
VTA1Q9NP79 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.35□□□□□ -1.55
VTA1Q9NP79 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
VTA1Q9NP79 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
VTA1Q9NP79 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VTA1Q9NP79 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VTA1Q9NP79 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.35□□□□□ -1.55
VTA1Q9NP79 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VTA1Q9NP79 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
VTA1Q9NP79 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
VTA1Q9NP79 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
VTA1Q9NP79 AC117529.2-201ENST00000512159 2068 ntBASIC5.35□□□□□ -1.55
VTA1Q9NP79 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VTA1Q9NP79 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
VTA1Q9NP79 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VTA1Q9NP79 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
VTA1Q9NP79 AC112198.2-201ENST00000426589 6996 ntBASIC5.34□□□□□ -1.55
VTA1Q9NP79 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
VTA1Q9NP79 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
VTA1Q9NP79 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VTA1Q9NP79 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.55
VTA1Q9NP79 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VTA1Q9NP79 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
VTA1Q9NP79 RNA5SP447-201ENST00000363749 119 ntBASIC5.34□□□□□ -1.55
VTA1Q9NP79 RNU6-501P-201ENST00000364072 100 ntBASIC5.34□□□□□ -1.55
VTA1Q9NP79 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
VTA1Q9NP79 Y_RNA.559-201ENST00000384686 107 ntBASIC5.34□□□□□ -1.55
VTA1Q9NP79 RNU6-648P-201ENST00000410190 107 ntBASIC5.34□□□□□ -1.55
VTA1Q9NP79 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.34□□□□□ -1.55
VTA1Q9NP79 CHIAP3-201ENST00000423668 1133 ntBASIC5.34□□□□□ -1.55
VTA1Q9NP79 RPL12P34-201ENST00000424532 479 ntBASIC5.34□□□□□ -1.55
VTA1Q9NP79 AL732292.1-201ENST00000426692 226 ntBASIC5.34□□□□□ -1.55
VTA1Q9NP79 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.34□□□□□ -1.55
VTA1Q9NP79 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC5.34□□□□□ -1.55
VTA1Q9NP79 BMI1P1-201ENST00000445879 941 ntBASIC5.34□□□□□ -1.55
VTA1Q9NP79 RPL39P6-201ENST00000448289 150 ntBASIC5.34□□□□□ -1.55
VTA1Q9NP79 ZNF114P1-201ENST00000453500 292 ntBASIC5.34□□□□□ -1.55
VTA1Q9NP79 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.34□□□□□ -1.55
VTA1Q9NP79 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
VTA1Q9NP79 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.34□□□□□ -1.55
VTA1Q9NP79 AC018797.3-201ENST00000513388 1241 ntBASIC5.34□□□□□ -1.55
VTA1Q9NP79 AC006499.2-201ENST00000513470 337 ntBASIC5.34□□□□□ -1.55
VTA1Q9NP79 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
VTA1Q9NP79 NPM1P6-201ENST00000521088 871 ntBASIC5.34□□□□□ -1.55
VTA1Q9NP79 AC068587.4-201ENST00000533893 186 ntBASIC5.34□□□□□ -1.55
VTA1Q9NP79 CYCSP28-201ENST00000534284 321 ntBASIC5.34□□□□□ -1.55
VTA1Q9NP79 AC093249.4-201ENST00000564755 259 ntBASIC5.34□□□□□ -1.55
VTA1Q9NP79 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC5.34□□□□□ -1.55
VTA1Q9NP79 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms