Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 Y_RNA.315-201ENST00000365117 102 ntBASIC5.61□□□□□ -1.51
SSU72Q9NP77 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.61□□□□□ -1.51
SSU72Q9NP77 SNORA51.6-201ENST00000384151 125 ntBASIC5.61□□□□□ -1.51
SSU72Q9NP77 RNU6-729P-201ENST00000384399 107 ntBASIC5.61□□□□□ -1.51
SSU72Q9NP77 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SSU72Q9NP77 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SSU72Q9NP77 PPIAP9-201ENST00000403866 498 ntBASIC5.61□□□□□ -1.51
SSU72Q9NP77 AL133260.1-201ENST00000405720 405 ntBASIC5.61□□□□□ -1.51
SSU72Q9NP77 Y_RNA.615-201ENST00000410769 117 ntBASIC5.61□□□□□ -1.51
SSU72Q9NP77 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.61□□□□□ -1.51
SSU72Q9NP77 AP000534.2-201ENST00000412729 568 ntBASIC5.61□□□□□ -1.51
SSU72Q9NP77 AC048351.1-201ENST00000420064 602 ntBASIC5.61□□□□□ -1.51
SSU72Q9NP77 RPL7AP51-201ENST00000422016 760 ntBASIC5.61□□□□□ -1.51
SSU72Q9NP77 AC092832.1-201ENST00000422934 400 ntBASIC5.61□□□□□ -1.51
SSU72Q9NP77 DUTP6-201ENST00000425573 462 ntBASIC5.61□□□□□ -1.51
SSU72Q9NP77 ATP5JP1-201ENST00000431631 322 ntBASIC5.61□□□□□ -1.51
SSU72Q9NP77 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
SSU72Q9NP77 AC234771.2-201ENST00000445718 597 ntBASIC5.61□□□□□ -1.51
SSU72Q9NP77 AC090804.1-201ENST00000448870 490 ntBASIC5.61□□□□□ -1.51
SSU72Q9NP77 HMGB1P7-201ENST00000450921 612 ntBASIC5.61□□□□□ -1.51
SSU72Q9NP77 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SSU72Q9NP77 RPS20P32-201ENST00000456044 356 ntBASIC5.61□□□□□ -1.51
SSU72Q9NP77 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SSU72Q9NP77 AC104563.1-201ENST00000476147 376 ntBASIC5.61□□□□□ -1.51
SSU72Q9NP77 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.61□□□□□ -1.51
SSU72Q9NP77 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SSU72Q9NP77 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC5.61□□□□□ -1.51
SSU72Q9NP77 SCARNA24.1-201ENST00000516465 137 ntBASIC5.61□□□□□ -1.51
SSU72Q9NP77 AC008627.1-201ENST00000517511 1704 ntBASIC5.61□□□□□ -1.51
SSU72Q9NP77 SOD1P3-201ENST00000518682 454 ntBASIC5.61□□□□□ -1.51
SSU72Q9NP77 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SSU72Q9NP77 AP005435.3-201ENST00000531260 3198 ntBASIC5.61□□□□□ -1.51
SSU72Q9NP77 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.61□□□□□ -1.51
SSU72Q9NP77 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC5.61□□□□□ -1.51
SSU72Q9NP77 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC5.61□□□□□ -1.51
SSU72Q9NP77 AC026464.5-201ENST00000562497 722 ntBASIC5.61□□□□□ -1.51
SSU72Q9NP77 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC5.61□□□□□ -1.51
SSU72Q9NP77 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SSU72Q9NP77 MIR4260-201ENST00000583107 67 ntBASIC5.61□□□□□ -1.51
SSU72Q9NP77 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.61□□□□□ -1.51
SSU72Q9NP77 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.61□□□□□ -1.51
SSU72Q9NP77 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.61□□□□□ -1.51
SSU72Q9NP77 AC090607.5-201ENST00000615692 224 ntBASIC5.61□□□□□ -1.51
SSU72Q9NP77 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SSU72Q9NP77 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SSU72Q9NP77 AL136228.1-201ENST00000622221 319 ntBASIC5.61□□□□□ -1.51
SSU72Q9NP77 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.61□□□□□ -1.51
SSU72Q9NP77 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
SSU72Q9NP77 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SSU72Q9NP77 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SSU72Q9NP77 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSU72Q9NP77 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
SSU72Q9NP77 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.6□□□□□ -1.51
SSU72Q9NP77 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSU72Q9NP77 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.6□□□□□ -1.51
SSU72Q9NP77 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSU72Q9NP77 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.6□□□□□ -1.51
SSU72Q9NP77 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.6□□□□□ -1.51
SSU72Q9NP77 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC5.6□□□□□ -1.51
SSU72Q9NP77 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.6□□□□□ -1.51
SSU72Q9NP77 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSU72Q9NP77 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSU72Q9NP77 TRIM51GP-201ENST00000534741 1350 ntBASIC5.6□□□□□ -1.51
SSU72Q9NP77 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.6□□□□□ -1.51
SSU72Q9NP77 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.6□□□□□ -1.51
SSU72Q9NP77 RNY4P16-201ENST00000364768 94 ntBASIC5.6□□□□□ -1.51
SSU72Q9NP77 SNORA33.2-201ENST00000365413 134 ntBASIC5.6□□□□□ -1.51
SSU72Q9NP77 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
SSU72Q9NP77 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSU72Q9NP77 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.6□□□□□ -1.51
SSU72Q9NP77 RPL5P18-201ENST00000406671 891 ntBASIC5.6□□□□□ -1.51
SSU72Q9NP77 NPM1P40-201ENST00000412758 733 ntBASIC5.6□□□□□ -1.51
SSU72Q9NP77 AL035422.1-201ENST00000414193 397 ntBASIC5.6□□□□□ -1.51
SSU72Q9NP77 COX5BP7-201ENST00000414780 274 ntBASIC5.6□□□□□ -1.51
SSU72Q9NP77 OR1AA1P-201ENST00000419597 916 ntBASIC5.6□□□□□ -1.51
SSU72Q9NP77 RGS17P1-201ENST00000423358 553 ntBASIC5.6□□□□□ -1.51
SSU72Q9NP77 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.6□□□□□ -1.51
SSU72Q9NP77 AC006548.1-201ENST00000427470 102 ntBASIC5.6□□□□□ -1.51
SSU72Q9NP77 Z82205.1-201ENST00000428456 297 ntBASIC5.6□□□□□ -1.51
SSU72Q9NP77 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.6□□□□□ -1.51
SSU72Q9NP77 RPL37P1-201ENST00000432310 284 ntBASIC5.6□□□□□ -1.51
SSU72Q9NP77 AC007679.3-201ENST00000434035 414 ntBASIC5.6□□□□□ -1.51
SSU72Q9NP77 AC012075.1-201ENST00000436549 580 ntBASIC5.6□□□□□ -1.51
SSU72Q9NP77 AL590399.4-201ENST00000436561 601 ntBASIC5.6□□□□□ -1.51
SSU72Q9NP77 GTF2IP13-201ENST00000438487 386 ntBASIC5.6□□□□□ -1.51
SSU72Q9NP77 IPO7P1-201ENST00000442031 636 ntBASIC5.6□□□□□ -1.51
SSU72Q9NP77 AC245291.3-201ENST00000443400 292 ntBASIC5.6□□□□□ -1.51
SSU72Q9NP77 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC5.6□□□□□ -1.51
SSU72Q9NP77 AL356010.1-201ENST00000456364 102 ntBASIC5.6□□□□□ -1.51
SSU72Q9NP77 RNU7-63P-201ENST00000459054 62 ntBASIC5.6□□□□□ -1.51
SSU72Q9NP77 MTND4P17-201ENST00000470444 350 ntBASIC5.6□□□□□ -1.51
SSU72Q9NP77 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.6□□□□□ -1.51
SSU72Q9NP77 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC5.6□□□□□ -1.51
SSU72Q9NP77 RPL32P9-201ENST00000487963 407 ntBASIC5.6□□□□□ -1.51
SSU72Q9NP77 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.6□□□□□ -1.51
SSU72Q9NP77 SUMO2P4-201ENST00000504193 276 ntBASIC5.6□□□□□ -1.51
SSU72Q9NP77 TTC39CP1-201ENST00000512513 755 ntBASIC5.6□□□□□ -1.51
SSU72Q9NP77 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC5.6□□□□□ -1.51
SSU72Q9NP77 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.6□□□□□ -1.51
SSU72Q9NP77 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms