Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 MIR124-3-201ENST00000384866 87 ntBASIC3.23□□□□□ -1.89
HMG20AQ9NP66 RNA5SP424-201ENST00000390988 115 ntBASIC3.23□□□□□ -1.89
HMG20AQ9NP66 RNA5SP317-201ENST00000410176 116 ntBASIC3.23□□□□□ -1.89
HMG20AQ9NP66 RNU2-37P-201ENST00000410695 177 ntBASIC3.23□□□□□ -1.89
HMG20AQ9NP66 RNA5SP311-201ENST00000411290 116 ntBASIC3.23□□□□□ -1.89
HMG20AQ9NP66 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.23□□□□□ -1.89
HMG20AQ9NP66 SDCBPP3-201ENST00000419629 891 ntBASIC3.23□□□□□ -1.89
HMG20AQ9NP66 FO393419.3-201ENST00000428741 282 ntBASIC3.23□□□□□ -1.89
HMG20AQ9NP66 Z74696.2-201ENST00000436514 498 ntBASIC3.23□□□□□ -1.89
HMG20AQ9NP66 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC3.23□□□□□ -1.89
HMG20AQ9NP66 ISCA1P2-201ENST00000438679 421 ntBASIC3.23□□□□□ -1.89
HMG20AQ9NP66 SNORA71B-202ENST00000439232 272 ntBASIC3.23□□□□□ -1.89
HMG20AQ9NP66 CBX1P4-201ENST00000439415 457 ntBASIC3.23□□□□□ -1.89
HMG20AQ9NP66 AC114755.5-201ENST00000447760 831 ntBASIC3.23□□□□□ -1.89
HMG20AQ9NP66 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.23□□□□□ -1.89
HMG20AQ9NP66 NDUFA5P9-201ENST00000472609 340 ntBASIC3.23□□□□□ -1.89
HMG20AQ9NP66 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.23□□□□□ -1.89
HMG20AQ9NP66 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HMG20AQ9NP66 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.23□□□□□ -1.89
HMG20AQ9NP66 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.23□□□□□ -1.89
HMG20AQ9NP66 SETP12-201ENST00000514068 805 ntBASIC3.23□□□□□ -1.89
HMG20AQ9NP66 MTCO1P30-201ENST00000515244 580 ntBASIC3.23□□□□□ -1.89
HMG20AQ9NP66 RNA5SP315-201ENST00000516340 116 ntBASIC3.23□□□□□ -1.89
HMG20AQ9NP66 RNA5SP164-201ENST00000516533 110 ntBASIC3.23□□□□□ -1.89
HMG20AQ9NP66 RNA5SP312-201ENST00000517068 116 ntBASIC3.23□□□□□ -1.89
HMG20AQ9NP66 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.23□□□□□ -1.89
HMG20AQ9NP66 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.23□□□□□ -1.89
HMG20AQ9NP66 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.23□□□□□ -1.89
HMG20AQ9NP66 AC120057.2-201ENST00000571520 271 ntBASIC3.23□□□□□ -1.89
HMG20AQ9NP66 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.23□□□□□ -1.89
HMG20AQ9NP66 AC006270.2-201ENST00000578523 652 ntBASIC3.23□□□□□ -1.89
HMG20AQ9NP66 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.23□□□□□ -1.89
HMG20AQ9NP66 ZNF92P3-201ENST00000596594 954 ntBASIC3.23□□□□□ -1.89
HMG20AQ9NP66 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.23□□□□□ -1.89
HMG20AQ9NP66 AF230666.2-201ENST00000602328 725 ntBASIC3.23□□□□□ -1.89
HMG20AQ9NP66 AC243654.2-201ENST00000612843 443 ntBASIC3.23□□□□□ -1.89
HMG20AQ9NP66 MIR1264-201ENST00000616374 69 ntBASIC3.23□□□□□ -1.89
HMG20AQ9NP66 MIR6758-201ENST00000620653 63 ntBASIC3.23□□□□□ -1.89
HMG20AQ9NP66 AL357559.1-201ENST00000622228 274 ntBASIC3.23□□□□□ -1.89
HMG20AQ9NP66 MIR6500-201ENST00000622700 86 ntBASIC3.23□□□□□ -1.89
HMG20AQ9NP66 AF001550.2-201ENST00000636643 217 ntBASIC3.23□□□□□ -1.89
HMG20AQ9NP66 AC138649.5-201ENST00000637456 137 ntBASIC3.23□□□□□ -1.89
HMG20AQ9NP66 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.23□□□□□ -1.89
HMG20AQ9NP66 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HMG20AQ9NP66 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
HMG20AQ9NP66 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.23□□□□□ -1.89
HMG20AQ9NP66 AC005183.1-201ENST00000603687 1979 ntBASIC3.22□□□□□ -1.89
HMG20AQ9NP66 AC021755.1-201ENST00000559747 1447 ntBASIC3.22□□□□□ -1.89
HMG20AQ9NP66 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HMG20AQ9NP66 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HMG20AQ9NP66 RNA5SP167-201ENST00000365461 116 ntBASIC3.22□□□□□ -1.89
HMG20AQ9NP66 RNU6-317P-201ENST00000384031 107 ntBASIC3.22□□□□□ -1.89
HMG20AQ9NP66 MIR142-201ENST00000384835 87 ntBASIC3.22□□□□□ -1.89
HMG20AQ9NP66 TAF9BP2-201ENST00000400856 499 ntBASIC3.22□□□□□ -1.89
HMG20AQ9NP66 ZNF602P-201ENST00000405929 924 ntBASIC3.22□□□□□ -1.89
HMG20AQ9NP66 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.22□□□□□ -1.89
HMG20AQ9NP66 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.22□□□□□ -1.89
HMG20AQ9NP66 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.22□□□□□ -1.89
HMG20AQ9NP66 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.22□□□□□ -1.89
HMG20AQ9NP66 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.22□□□□□ -1.89
HMG20AQ9NP66 SNORD108-201ENST00000459332 71 ntBASIC3.22□□□□□ -1.89
HMG20AQ9NP66 OR9M1P-201ENST00000459641 921 ntBASIC3.22□□□□□ -1.89
HMG20AQ9NP66 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.22□□□□□ -1.89
HMG20AQ9NP66 RNU6-1102P-201ENST00000516149 96 ntBASIC3.22□□□□□ -1.89
HMG20AQ9NP66 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.22□□□□□ -1.89
HMG20AQ9NP66 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.22□□□□□ -1.89
HMG20AQ9NP66 AL121594.4-201ENST00000556211 1196 ntBASIC3.22□□□□□ -1.89
HMG20AQ9NP66 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
HMG20AQ9NP66 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.22□□□□□ -1.89
HMG20AQ9NP66 ZNF192P1-203ENST00000565888 810 ntBASIC3.22□□□□□ -1.89
HMG20AQ9NP66 AC233266.2-201ENST00000567067 528 ntBASIC3.22□□□□□ -1.89
HMG20AQ9NP66 MIR4506-201ENST00000584693 77 ntBASIC3.22□□□□□ -1.89
HMG20AQ9NP66 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.22□□□□□ -1.89
HMG20AQ9NP66 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.22□□□□□ -1.89
HMG20AQ9NP66 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.22□□□□□ -1.89
HMG20AQ9NP66 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HMG20AQ9NP66 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
HMG20AQ9NP66 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
HMG20AQ9NP66 AC138393.1-206ENST00000540997 1886 ntBASIC3.22□□□□□ -1.89
HMG20AQ9NP66 GTF2H2B-203ENST00000508065 1432 ntBASIC3.21□□□□□ -1.9
HMG20AQ9NP66 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HMG20AQ9NP66 AC008264.2-201ENST00000610193 3731 ntBASIC3.21□□□□□ -1.9
HMG20AQ9NP66 SNORA62-201ENST00000365493 153 ntBASIC3.21□□□□□ -1.9
HMG20AQ9NP66 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
HMG20AQ9NP66 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.21□□□□□ -1.9
HMG20AQ9NP66 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.21□□□□□ -1.9
HMG20AQ9NP66 RPL23AP82-202ENST00000427528 469 ntBASIC3.21□□□□□ -1.9
HMG20AQ9NP66 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.21□□□□□ -1.9
HMG20AQ9NP66 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.21□□□□□ -1.9
HMG20AQ9NP66 AL035458.1-201ENST00000433096 585 ntBASIC3.21□□□□□ -1.9
HMG20AQ9NP66 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.21□□□□□ -1.9
HMG20AQ9NP66 MTND4P15-201ENST00000437913 1033 ntBASIC3.21□□□□□ -1.9
HMG20AQ9NP66 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.21□□□□□ -1.9
HMG20AQ9NP66 AL357552.1-201ENST00000445254 415 ntBASIC3.21□□□□□ -1.9
HMG20AQ9NP66 AC006326.1-201ENST00000445465 787 ntBASIC3.21□□□□□ -1.9
HMG20AQ9NP66 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.21□□□□□ -1.9
HMG20AQ9NP66 CYCSP53-201ENST00000455540 265 ntBASIC3.21□□□□□ -1.9
HMG20AQ9NP66 CENPBD1P1-201ENST00000464061 469 ntBASIC3.21□□□□□ -1.9
HMG20AQ9NP66 AC084357.1-201ENST00000473404 255 ntBASIC3.21□□□□□ -1.9
HMG20AQ9NP66 AP000563.1-201ENST00000490865 758 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms