Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LRRC40Q9H9A6 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 AC090337.1-201ENST00000579651 2074 ntBASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 RNU6-1339P-201ENST00000363574 91 ntBASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 EIF5P1-201ENST00000400019 1231 ntBASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 TCEA1P2-201ENST00000420496 906 ntBASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 AL159169.1-201ENST00000421119 127 ntBASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 ETF1P3-201ENST00000430422 1160 ntBASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 AC239367.2-201ENST00000447309 705 ntBASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 AC099563.1-201ENST00000456086 418 ntBASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 SNRPGP3-201ENST00000469405 227 ntBASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 AC108729.2-201ENST00000476543 840 ntBASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 NPM1P17-201ENST00000479221 602 ntBASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 VN1R105P-201ENST00000486595 910 ntBASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 AL139099.1-201ENST00000497398 403 ntBASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 TRAV31-201ENST00000502780 342 ntBASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 OR8R1P-201ENST00000543943 764 ntBASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 AC007224.1-201ENST00000564410 144 ntBASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 MIR4286-201ENST00000580651 93 ntBASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 AC020910.2-201ENST00000603635 610 ntBASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 AC007566.2-201ENST00000603642 413 ntBASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 AC092653.1-201ENST00000608509 531 ntBASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 AC012531.5-201ENST00000611375 151 ntBASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 AC005344.1-201ENST00000613391 459 ntBASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 MIR6875-201ENST00000617506 72 ntBASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 AP003400.6-201ENST00000624698 740 ntBASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LRRC40Q9H9A6 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 MIR1250-201ENST00000408098 113 ntBASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 RNU6-272P-201ENST00000411028 104 ntBASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 Y_RNA.625-201ENST00000411256 107 ntBASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 AC073264.1-201ENST00000411508 416 ntBASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 AC069218.2-201ENST00000411665 344 ntBASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 EI24P1-201ENST00000416584 867 ntBASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 AC017083.1-201ENST00000428093 483 ntBASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 RPL36P19-201ENST00000430744 301 ntBASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 MOB1AP1-201ENST00000430903 535 ntBASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 RPL21P112-201ENST00000434403 463 ntBASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 AC009263.1-201ENST00000441193 1239 ntBASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 DNAJC19P8-201ENST00000452887 259 ntBASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 AC104108.1-201ENST00000509930 412 ntBASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 AL121766.1-201ENST00000547436 487 ntBASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 MTCYBP28-201ENST00000566728 1132 ntBASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 SNRPGP15-201ENST00000600149 222 ntBASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 AC040174.2-201ENST00000602701 465 ntBASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 AC112230.1-201ENST00000604342 547 ntBASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 FRG1HP-204ENST00000617940 757 ntBASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 U73479.1-201ENST00000618062 168 ntBASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 AL354798.1-201ENST00000622505 329 ntBASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 AC020978.9-201ENST00000624380 1141 ntBASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 AC092608.3-201ENST00000625017 386 ntBASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 OR6C71P-202ENST00000641886 1107 ntBASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 AP004289.2-201ENST00000444413 1457 ntBASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 FAM91A3P-201ENST00000456826 2544 ntBASIC3.78□□□□□ -1.8
LRRC40Q9H9A6 ELL2P4-201ENST00000446870 1376 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms