Protein–RNA interactions for Protein: Q9BQP9

BPIFA3, BPI fold-containing family A member 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA3Q9BQP9 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.8□□□□□ -1.8
BPIFA3Q9BQP9 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
BPIFA3Q9BQP9 TPT1P13-201ENST00000449760 499 ntBASIC3.8□□□□□ -1.8
BPIFA3Q9BQP9 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.8□□□□□ -1.8
BPIFA3Q9BQP9 RN7SL330P-201ENST00000469709 307 ntBASIC3.8□□□□□ -1.8
BPIFA3Q9BQP9 AC026979.1-201ENST00000492525 396 ntBASIC3.8□□□□□ -1.8
BPIFA3Q9BQP9 RPL5P23-201ENST00000496040 868 ntBASIC3.8□□□□□ -1.8
BPIFA3Q9BQP9 AC021146.5-201ENST00000503544 545 ntBASIC3.8□□□□□ -1.8
BPIFA3Q9BQP9 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.8□□□□□ -1.8
BPIFA3Q9BQP9 SCARNA20.6-201ENST00000517251 106 ntBASIC3.8□□□□□ -1.8
BPIFA3Q9BQP9 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.8□□□□□ -1.8
BPIFA3Q9BQP9 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.8□□□□□ -1.8
BPIFA3Q9BQP9 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.8□□□□□ -1.8
BPIFA3Q9BQP9 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.8□□□□□ -1.8
BPIFA3Q9BQP9 AC119674.1-207ENST00000641355 633 ntBASIC3.8□□□□□ -1.8
BPIFA3Q9BQP9 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
BPIFA3Q9BQP9 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
BPIFA3Q9BQP9 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.8□□□□□ -1.8
BPIFA3Q9BQP9 ZNF826P-207ENST00000622273 1910 ntBASIC3.8□□□□□ -1.8
BPIFA3Q9BQP9 AP001486.2-201ENST00000561652 5113 ntBASIC3.79□□□□□ -1.8
BPIFA3Q9BQP9 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.79□□□□□ -1.8
BPIFA3Q9BQP9 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
BPIFA3Q9BQP9 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
BPIFA3Q9BQP9 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
BPIFA3Q9BQP9 MFSD8-236ENST00000641509 4050 ntBASIC3.79□□□□□ -1.8
BPIFA3Q9BQP9 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
BPIFA3Q9BQP9 RNA5SP391-201ENST00000363456 119 ntBASIC3.79□□□□□ -1.8
BPIFA3Q9BQP9 U8.11-201ENST00000384699 133 ntBASIC3.79□□□□□ -1.8
BPIFA3Q9BQP9 U8.12-201ENST00000384701 133 ntBASIC3.79□□□□□ -1.8
BPIFA3Q9BQP9 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.79□□□□□ -1.8
BPIFA3Q9BQP9 MIR937-201ENST00000401271 86 ntBASIC3.79□□□□□ -1.8
BPIFA3Q9BQP9 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.79□□□□□ -1.8
BPIFA3Q9BQP9 TCEA1P4-201ENST00000415066 844 ntBASIC3.79□□□□□ -1.8
BPIFA3Q9BQP9 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.79□□□□□ -1.8
BPIFA3Q9BQP9 ETF1P3-201ENST00000430422 1160 ntBASIC3.79□□□□□ -1.8
BPIFA3Q9BQP9 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.79□□□□□ -1.8
BPIFA3Q9BQP9 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.79□□□□□ -1.8
BPIFA3Q9BQP9 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC3.79□□□□□ -1.8
BPIFA3Q9BQP9 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.79□□□□□ -1.8
BPIFA3Q9BQP9 U3.44-201ENST00000458938 192 ntBASIC3.79□□□□□ -1.8
BPIFA3Q9BQP9 U8.18-201ENST00000459285 133 ntBASIC3.79□□□□□ -1.8
BPIFA3Q9BQP9 RPL37P6-202ENST00000464216 403 ntBASIC3.79□□□□□ -1.8
BPIFA3Q9BQP9 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.79□□□□□ -1.8
BPIFA3Q9BQP9 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.79□□□□□ -1.8
BPIFA3Q9BQP9 PHBP14-201ENST00000512887 367 ntBASIC3.79□□□□□ -1.8
BPIFA3Q9BQP9 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
BPIFA3Q9BQP9 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.79□□□□□ -1.8
BPIFA3Q9BQP9 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.79□□□□□ -1.8
BPIFA3Q9BQP9 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.79□□□□□ -1.8
BPIFA3Q9BQP9 AC092653.1-201ENST00000608509 531 ntBASIC3.79□□□□□ -1.8
BPIFA3Q9BQP9 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC3.79□□□□□ -1.8
BPIFA3Q9BQP9 U4.6-201ENST00000621618 127 ntBASIC3.79□□□□□ -1.8
BPIFA3Q9BQP9 AC010435.1-201ENST00000623353 1177 ntBASIC3.79□□□□□ -1.8
BPIFA3Q9BQP9 AC006065.5-201ENST00000623427 349 ntBASIC3.79□□□□□ -1.8
BPIFA3Q9BQP9 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.79□□□□□ -1.8
BPIFA3Q9BQP9 AC138649.5-201ENST00000637456 137 ntBASIC3.79□□□□□ -1.8
BPIFA3Q9BQP9 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
BPIFA3Q9BQP9 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
BPIFA3Q9BQP9 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
BPIFA3Q9BQP9 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
BPIFA3Q9BQP9 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.79□□□□□ -1.8
BPIFA3Q9BQP9 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
BPIFA3Q9BQP9 SRP72P2-201ENST00000344851 1979 ntBASIC3.78□□□□□ -1.8
BPIFA3Q9BQP9 METTL21EP-201ENST00000298105 713 ntBASIC3.78□□□□□ -1.8
BPIFA3Q9BQP9 RPL7P26-201ENST00000333817 754 ntBASIC3.78□□□□□ -1.8
BPIFA3Q9BQP9 EI24P2-201ENST00000397776 1076 ntBASIC3.78□□□□□ -1.8
BPIFA3Q9BQP9 AC010385.1-201ENST00000412374 256 ntBASIC3.78□□□□□ -1.8
BPIFA3Q9BQP9 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
BPIFA3Q9BQP9 AC016769.2-201ENST00000414815 475 ntBASIC3.78□□□□□ -1.8
BPIFA3Q9BQP9 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.78□□□□□ -1.8
BPIFA3Q9BQP9 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.78□□□□□ -1.8
BPIFA3Q9BQP9 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.78□□□□□ -1.8
BPIFA3Q9BQP9 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.78□□□□□ -1.8
BPIFA3Q9BQP9 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.78□□□□□ -1.8
BPIFA3Q9BQP9 RPS15AP29-201ENST00000445539 400 ntBASIC3.78□□□□□ -1.8
BPIFA3Q9BQP9 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.78□□□□□ -1.8
BPIFA3Q9BQP9 SBDSP1-204ENST00000453858 737 ntBASIC3.78□□□□□ -1.8
BPIFA3Q9BQP9 PLGLA-201ENST00000465668 449 ntBASIC3.78□□□□□ -1.8
BPIFA3Q9BQP9 RPL23AP44-201ENST00000482216 473 ntBASIC3.78□□□□□ -1.8
BPIFA3Q9BQP9 KCTD9P5-201ENST00000504141 1170 ntBASIC3.78□□□□□ -1.8
BPIFA3Q9BQP9 AC114967.1-201ENST00000504890 259 ntBASIC3.78□□□□□ -1.8
BPIFA3Q9BQP9 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
BPIFA3Q9BQP9 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.78□□□□□ -1.8
BPIFA3Q9BQP9 RNU1-143P-201ENST00000516296 146 ntBASIC3.78□□□□□ -1.8
BPIFA3Q9BQP9 RNU4-60P-201ENST00000517239 135 ntBASIC3.78□□□□□ -1.8
BPIFA3Q9BQP9 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.78□□□□□ -1.8
BPIFA3Q9BQP9 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.78□□□□□ -1.8
BPIFA3Q9BQP9 HMGB1P46-201ENST00000520062 610 ntBASIC3.78□□□□□ -1.8
BPIFA3Q9BQP9 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.78□□□□□ -1.8
BPIFA3Q9BQP9 AC008562.1-201ENST00000521763 330 ntBASIC3.78□□□□□ -1.8
BPIFA3Q9BQP9 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.78□□□□□ -1.8
BPIFA3Q9BQP9 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.78□□□□□ -1.8
BPIFA3Q9BQP9 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.78□□□□□ -1.8
BPIFA3Q9BQP9 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.78□□□□□ -1.8
BPIFA3Q9BQP9 MIR4286-201ENST00000580651 93 ntBASIC3.78□□□□□ -1.8
BPIFA3Q9BQP9 AC113194.1-201ENST00000606037 500 ntBASIC3.78□□□□□ -1.8
BPIFA3Q9BQP9 AL023583.1-201ENST00000607518 1143 ntBASIC3.78□□□□□ -1.8
BPIFA3Q9BQP9 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.78□□□□□ -1.8
BPIFA3Q9BQP9 BX323046.1-201ENST00000610145 535 ntBASIC3.78□□□□□ -1.8
BPIFA3Q9BQP9 U1.23-201ENST00000610293 146 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms