Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 ELOCP5-201ENST00000604924 333 ntBASIC6.34□□□□□ -1.39
USB1Q9BQ65 MIR6774-201ENST00000614651 70 ntBASIC6.34□□□□□ -1.39
USB1Q9BQ65 SNHG22-203ENST00000617833 660 ntBASIC6.34□□□□□ -1.39
USB1Q9BQ65 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC6.34□□□□□ -1.39
USB1Q9BQ65 AC007347.2-201ENST00000623044 180 ntBASIC6.34□□□□□ -1.39
USB1Q9BQ65 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.34□□□□□ -1.39
USB1Q9BQ65 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
USB1Q9BQ65 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
USB1Q9BQ65 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.34□□□□□ -1.39
USB1Q9BQ65 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
USB1Q9BQ65 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
USB1Q9BQ65 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
USB1Q9BQ65 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.34□□□□□ -1.4
USB1Q9BQ65 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.4
USB1Q9BQ65 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.4
USB1Q9BQ65 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
USB1Q9BQ65 AC027287.1-201ENST00000553115 1453 ntBASIC6.34□□□□□ -1.4
USB1Q9BQ65 ZNF806-201ENST00000438300 1774 ntBASIC6.34□□□□□ -1.4
USB1Q9BQ65 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.33□□□□□ -1.4
USB1Q9BQ65 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
USB1Q9BQ65 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.33□□□□□ -1.4
USB1Q9BQ65 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.33□□□□□ -1.4
USB1Q9BQ65 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.33□□□□□ -1.4
USB1Q9BQ65 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
USB1Q9BQ65 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
USB1Q9BQ65 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC6.33□□□□□ -1.4
USB1Q9BQ65 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
USB1Q9BQ65 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
USB1Q9BQ65 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC6.33□□□□□ -1.4
USB1Q9BQ65 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.33□□□□□ -1.4
USB1Q9BQ65 AC007114.2-201ENST00000576014 4281 ntBASIC6.33□□□□□ -1.4
USB1Q9BQ65 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
USB1Q9BQ65 Y_RNA.48-201ENST00000362710 103 ntBASIC6.33□□□□□ -1.4
USB1Q9BQ65 RNU6-378P-201ENST00000384324 107 ntBASIC6.33□□□□□ -1.4
USB1Q9BQ65 MIR625-201ENST00000385047 85 ntBASIC6.33□□□□□ -1.4
USB1Q9BQ65 MIR92A2-201ENST00000385299 75 ntBASIC6.33□□□□□ -1.4
USB1Q9BQ65 RNU6-754P-201ENST00000391166 107 ntBASIC6.33□□□□□ -1.4
USB1Q9BQ65 SAR1AP2-201ENST00000392696 594 ntBASIC6.33□□□□□ -1.4
USB1Q9BQ65 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
USB1Q9BQ65 RNA5SP36-201ENST00000410197 133 ntBASIC6.33□□□□□ -1.4
USB1Q9BQ65 RN7SKP146-201ENST00000410242 334 ntBASIC6.33□□□□□ -1.4
USB1Q9BQ65 RNU6-174P-201ENST00000410406 106 ntBASIC6.33□□□□□ -1.4
USB1Q9BQ65 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC6.33□□□□□ -1.4
USB1Q9BQ65 AL359633.1-201ENST00000421403 310 ntBASIC6.33□□□□□ -1.4
USB1Q9BQ65 AL031736.2-201ENST00000426573 787 ntBASIC6.33□□□□□ -1.4
USB1Q9BQ65 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
USB1Q9BQ65 GAS5-211ENST00000432536 959 ntTSL 2 BASIC6.33□□□□□ -1.4
USB1Q9BQ65 AL591704.1-201ENST00000432574 275 ntBASIC6.33□□□□□ -1.4
USB1Q9BQ65 AL590399.4-201ENST00000436561 601 ntBASIC6.33□□□□□ -1.4
USB1Q9BQ65 TMSB4XP3-201ENST00000445144 114 ntBASIC6.33□□□□□ -1.4
USB1Q9BQ65 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC6.33□□□□□ -1.4
USB1Q9BQ65 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC6.33□□□□□ -1.4
USB1Q9BQ65 TREML3P-201ENST00000457327 501 ntBASIC6.33□□□□□ -1.4
USB1Q9BQ65 AP000942.1-201ENST00000463969 747 ntBASIC6.33□□□□□ -1.4
USB1Q9BQ65 AC021074.2-201ENST00000468434 172 ntBASIC6.33□□□□□ -1.4
USB1Q9BQ65 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
USB1Q9BQ65 AC022034.3-201ENST00000471393 478 ntBASIC6.33□□□□□ -1.4
USB1Q9BQ65 AC144568.1-201ENST00000520139 137 ntBASIC6.33□□□□□ -1.4
USB1Q9BQ65 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC6.33□□□□□ -1.4
USB1Q9BQ65 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
USB1Q9BQ65 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.33□□□□□ -1.4
USB1Q9BQ65 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.33□□□□□ -1.4
USB1Q9BQ65 AC091932.1-201ENST00000569381 427 ntBASIC6.33□□□□□ -1.4
USB1Q9BQ65 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
USB1Q9BQ65 MIR5010-201ENST00000582846 120 ntBASIC6.33□□□□□ -1.4
USB1Q9BQ65 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.33□□□□□ -1.4
USB1Q9BQ65 AC025588.3-201ENST00000604182 274 ntBASIC6.33□□□□□ -1.4
USB1Q9BQ65 MIR8082-201ENST00000612488 81 ntBASIC6.33□□□□□ -1.4
USB1Q9BQ65 AP001282.2-201ENST00000616149 309 ntBASIC6.33□□□□□ -1.4
USB1Q9BQ65 AC006453.3-201ENST00000635891 377 ntBASIC6.33□□□□□ -1.4
USB1Q9BQ65 PANDAR-201ENST00000629595 1506 ntBASIC6.33□□□□□ -1.4
USB1Q9BQ65 SAMMSON-213ENST00000641336 1521 ntBASIC6.33□□□□□ -1.4
USB1Q9BQ65 AC018688.1-201ENST00000636528 1754 ntBASIC6.33□□□□□ -1.4
USB1Q9BQ65 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
USB1Q9BQ65 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
USB1Q9BQ65 HSPA8P4-201ENST00000511877 1920 ntBASIC6.33□□□□□ -1.4
USB1Q9BQ65 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
USB1Q9BQ65 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
USB1Q9BQ65 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
USB1Q9BQ65 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
USB1Q9BQ65 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
USB1Q9BQ65 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
USB1Q9BQ65 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.32□□□□□ -1.4
USB1Q9BQ65 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
USB1Q9BQ65 AL139384.2-201ENST00000613809 3590 ntBASIC6.32□□□□□ -1.4
USB1Q9BQ65 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC6.32□□□□□ -1.4
USB1Q9BQ65 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
USB1Q9BQ65 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
USB1Q9BQ65 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
USB1Q9BQ65 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
USB1Q9BQ65 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC6.32□□□□□ -1.4
USB1Q9BQ65 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
USB1Q9BQ65 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.32□□□□□ -1.4
USB1Q9BQ65 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
USB1Q9BQ65 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
USB1Q9BQ65 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
USB1Q9BQ65 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
USB1Q9BQ65 RNY1P16-201ENST00000363063 111 ntBASIC6.32□□□□□ -1.4
USB1Q9BQ65 Y_RNA.105-201ENST00000363182 111 ntBASIC6.32□□□□□ -1.4
USB1Q9BQ65 RNU6-596P-201ENST00000365395 98 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms