Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
C9orf72Q96LT7 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.66□□□□□ -1.82
C9orf72Q96LT7 MIR30E-201ENST00000362104 92 ntBASIC3.66□□□□□ -1.82
C9orf72Q96LT7 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
C9orf72Q96LT7 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
C9orf72Q96LT7 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
C9orf72Q96LT7 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.66□□□□□ -1.82
C9orf72Q96LT7 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.66□□□□□ -1.82
C9orf72Q96LT7 ZNF736P10Y-201ENST00000403990 1110 ntBASIC3.66□□□□□ -1.82
C9orf72Q96LT7 AL590290.1-201ENST00000405336 380 ntBASIC3.66□□□□□ -1.82
C9orf72Q96LT7 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.66□□□□□ -1.82
C9orf72Q96LT7 AL512504.1-201ENST00000415494 778 ntBASIC3.66□□□□□ -1.82
C9orf72Q96LT7 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.66□□□□□ -1.82
C9orf72Q96LT7 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.66□□□□□ -1.82
C9orf72Q96LT7 SDCBPP2-201ENST00000424643 885 ntBASIC3.66□□□□□ -1.82
C9orf72Q96LT7 OSTCP5-201ENST00000425293 453 ntBASIC3.66□□□□□ -1.82
C9orf72Q96LT7 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
C9orf72Q96LT7 MTCO1P57-201ENST00000432182 261 ntBASIC3.66□□□□□ -1.82
C9orf72Q96LT7 MRPS18BP2-201ENST00000434310 759 ntBASIC3.66□□□□□ -1.82
C9orf72Q96LT7 TPTE2P6-202ENST00000445572 1007 ntBASIC3.66□□□□□ -1.82
C9orf72Q96LT7 AC010655.1-201ENST00000449336 292 ntBASIC3.66□□□□□ -1.82
C9orf72Q96LT7 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.66□□□□□ -1.82
C9orf72Q96LT7 AC090543.1-201ENST00000492168 485 ntBASIC3.66□□□□□ -1.82
C9orf72Q96LT7 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.66□□□□□ -1.82
C9orf72Q96LT7 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.66□□□□□ -1.82
C9orf72Q96LT7 RNU6-1231P-201ENST00000517185 103 ntBASIC3.66□□□□□ -1.82
C9orf72Q96LT7 AC011602.1-201ENST00000546484 331 ntBASIC3.66□□□□□ -1.82
C9orf72Q96LT7 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.66□□□□□ -1.82
C9orf72Q96LT7 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.66□□□□□ -1.82
C9orf72Q96LT7 AP003117.2-201ENST00000606010 545 ntBASIC3.66□□□□□ -1.82
C9orf72Q96LT7 AC110792.4-201ENST00000609843 298 ntBASIC3.66□□□□□ -1.82
C9orf72Q96LT7 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC3.66□□□□□ -1.82
C9orf72Q96LT7 AC022149.2-201ENST00000621061 203 ntBASIC3.66□□□□□ -1.82
C9orf72Q96LT7 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.66□□□□□ -1.82
C9orf72Q96LT7 AL034408.1-202ENST00000636088 415 ntBASIC3.66□□□□□ -1.82
C9orf72Q96LT7 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
C9orf72Q96LT7 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
C9orf72Q96LT7 DCAF13P1-201ENST00000495256 1330 ntBASIC3.66□□□□□ -1.82
C9orf72Q96LT7 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
C9orf72Q96LT7 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
C9orf72Q96LT7 AC007342.9-201ENST00000623877 1385 ntBASIC3.65□□□□□ -1.82
C9orf72Q96LT7 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
C9orf72Q96LT7 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
C9orf72Q96LT7 RNA5SP167-201ENST00000365461 116 ntBASIC3.65□□□□□ -1.83
C9orf72Q96LT7 AC007066.1-201ENST00000392902 381 ntBASIC3.65□□□□□ -1.83
C9orf72Q96LT7 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.65□□□□□ -1.83
C9orf72Q96LT7 AC234782.4-201ENST00000417646 1048 ntBASIC3.65□□□□□ -1.83
C9orf72Q96LT7 AL035423.1-201ENST00000420331 213 ntBASIC3.65□□□□□ -1.83
C9orf72Q96LT7 MRPS33P4-201ENST00000434892 317 ntBASIC3.65□□□□□ -1.83
C9orf72Q96LT7 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.65□□□□□ -1.83
C9orf72Q96LT7 TVP23BP2-201ENST00000455082 615 ntBASIC3.65□□□□□ -1.83
C9orf72Q96LT7 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
C9orf72Q96LT7 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.65□□□□□ -1.83
C9orf72Q96LT7 AC110768.1-201ENST00000509222 400 ntBASIC3.65□□□□□ -1.83
C9orf72Q96LT7 AC110792.2-201ENST00000510278 224 ntBASIC3.65□□□□□ -1.83
C9orf72Q96LT7 RN7SKP82-201ENST00000516786 223 ntBASIC3.65□□□□□ -1.83
C9orf72Q96LT7 RNU6-889P-201ENST00000517189 103 ntBASIC3.65□□□□□ -1.83
C9orf72Q96LT7 AC007991.1-201ENST00000522680 631 ntBASIC3.65□□□□□ -1.83
C9orf72Q96LT7 PTP4A1P6-201ENST00000531034 478 ntBASIC3.65□□□□□ -1.83
C9orf72Q96LT7 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.65□□□□□ -1.83
C9orf72Q96LT7 AL121594.4-201ENST00000556211 1196 ntBASIC3.65□□□□□ -1.83
C9orf72Q96LT7 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.65□□□□□ -1.83
C9orf72Q96LT7 AP000919.1-202ENST00000581139 1264 ntBASIC3.65□□□□□ -1.83
C9orf72Q96LT7 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
C9orf72Q96LT7 MTCO3P22-201ENST00000603219 784 ntBASIC3.65□□□□□ -1.83
C9orf72Q96LT7 U6.48-201ENST00000618523 106 ntBASIC3.65□□□□□ -1.83
C9orf72Q96LT7 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.65□□□□□ -1.83
C9orf72Q96LT7 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.65□□□□□ -1.83
C9orf72Q96LT7 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
C9orf72Q96LT7 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.65□□□□□ -1.83
C9orf72Q96LT7 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
C9orf72Q96LT7 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
C9orf72Q96LT7 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.64□□□□□ -1.83
C9orf72Q96LT7 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
C9orf72Q96LT7 GTF2H2B-203ENST00000508065 1432 ntBASIC3.64□□□□□ -1.83
C9orf72Q96LT7 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
C9orf72Q96LT7 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
C9orf72Q96LT7 SNORD3H-201ENST00000384486 214 ntBASIC3.64□□□□□ -1.83
C9orf72Q96LT7 HMGB3P18-201ENST00000406327 590 ntBASIC3.64□□□□□ -1.83
C9orf72Q96LT7 U3.39-201ENST00000408569 239 ntBASIC3.64□□□□□ -1.83
C9orf72Q96LT7 SYF2P2-201ENST00000417620 583 ntBASIC3.64□□□□□ -1.83
C9orf72Q96LT7 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.64□□□□□ -1.83
C9orf72Q96LT7 ELOCP6-201ENST00000429066 328 ntBASIC3.64□□□□□ -1.83
C9orf72Q96LT7 AC091286.1-201ENST00000431233 461 ntBASIC3.64□□□□□ -1.83
C9orf72Q96LT7 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.64□□□□□ -1.83
C9orf72Q96LT7 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
C9orf72Q96LT7 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
C9orf72Q96LT7 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.64□□□□□ -1.83
C9orf72Q96LT7 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
C9orf72Q96LT7 ELOCP12-201ENST00000458706 328 ntBASIC3.64□□□□□ -1.83
C9orf72Q96LT7 RPL23AP62-201ENST00000463396 453 ntBASIC3.64□□□□□ -1.83
C9orf72Q96LT7 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.64□□□□□ -1.83
C9orf72Q96LT7 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.64□□□□□ -1.83
C9orf72Q96LT7 AL049830.2-201ENST00000480072 201 ntBASIC3.64□□□□□ -1.83
C9orf72Q96LT7 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.64□□□□□ -1.83
C9orf72Q96LT7 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.64□□□□□ -1.83
C9orf72Q96LT7 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.64□□□□□ -1.83
C9orf72Q96LT7 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.64□□□□□ -1.83
C9orf72Q96LT7 RNU6-579P-201ENST00000516879 102 ntBASIC3.64□□□□□ -1.83
C9orf72Q96LT7 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms