Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC6.91□□□□□ -1.3
TRIM47Q96LD4 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC6.91□□□□□ -1.3
TRIM47Q96LD4 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC6.91□□□□□ -1.3
TRIM47Q96LD4 AC006499.3-201ENST00000506077 748 ntBASIC6.91□□□□□ -1.3
TRIM47Q96LD4 HMGB1P28-201ENST00000507778 552 ntBASIC6.91□□□□□ -1.3
TRIM47Q96LD4 RPA2P3-201ENST00000533268 770 ntBASIC6.91□□□□□ -1.3
TRIM47Q96LD4 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC6.91□□□□□ -1.3
TRIM47Q96LD4 CYCSP2-201ENST00000558168 301 ntBASIC6.91□□□□□ -1.3
TRIM47Q96LD4 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.91□□□□□ -1.3
TRIM47Q96LD4 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC6.91□□□□□ -1.3
TRIM47Q96LD4 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC6.91□□□□□ -1.3
TRIM47Q96LD4 AL021918.2-201ENST00000613415 194 ntBASIC6.91□□□□□ -1.3
TRIM47Q96LD4 AC133104.2-201ENST00000615272 193 ntBASIC6.91□□□□□ -1.3
TRIM47Q96LD4 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.91□□□□□ -1.3
TRIM47Q96LD4 ATM-230ENST00000640388 578 ntTSL 5 BASIC6.91□□□□□ -1.3
TRIM47Q96LD4 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.91□□□□□ -1.3
TRIM47Q96LD4 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
TRIM47Q96LD4 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.91□□□□□ -1.3
TRIM47Q96LD4 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
TRIM47Q96LD4 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
TRIM47Q96LD4 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.91□□□□□ -1.3
TRIM47Q96LD4 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.91□□□□□ -1.3
TRIM47Q96LD4 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
TRIM47Q96LD4 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
TRIM47Q96LD4 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
TRIM47Q96LD4 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
TRIM47Q96LD4 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
TRIM47Q96LD4 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.9□□□□□ -1.3
TRIM47Q96LD4 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.9□□□□□ -1.3
TRIM47Q96LD4 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
TRIM47Q96LD4 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.9□□□□□ -1.3
TRIM47Q96LD4 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
TRIM47Q96LD4 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
TRIM47Q96LD4 AC093775.1-201ENST00000624154 1868 ntBASIC6.9□□□□□ -1.3
TRIM47Q96LD4 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
TRIM47Q96LD4 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
TRIM47Q96LD4 AC073365.1-203ENST00000641055 1992 ntBASIC6.9□□□□□ -1.3
TRIM47Q96LD4 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
TRIM47Q96LD4 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.9□□□□□ -1.3
TRIM47Q96LD4 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
TRIM47Q96LD4 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
TRIM47Q96LD4 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC6.9□□□□□ -1.3
TRIM47Q96LD4 RNU6-1040P-201ENST00000383974 107 ntBASIC6.9□□□□□ -1.3
TRIM47Q96LD4 MIR585-201ENST00000384887 94 ntBASIC6.9□□□□□ -1.3
TRIM47Q96LD4 SAR1AP2-201ENST00000392696 594 ntBASIC6.9□□□□□ -1.3
TRIM47Q96LD4 SOD2P1-201ENST00000396543 562 ntBASIC6.9□□□□□ -1.3
TRIM47Q96LD4 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
TRIM47Q96LD4 RN7SKP158-201ENST00000410453 326 ntBASIC6.9□□□□□ -1.3
TRIM47Q96LD4 AC074085.1-201ENST00000413598 418 ntBASIC6.9□□□□□ -1.3
TRIM47Q96LD4 AC073335.1-201ENST00000427776 363 ntBASIC6.9□□□□□ -1.3
TRIM47Q96LD4 RBMY2QP-201ENST00000429799 1147 ntBASIC6.9□□□□□ -1.3
TRIM47Q96LD4 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6.9□□□□□ -1.3
TRIM47Q96LD4 ERLEC1P1-201ENST00000433806 578 ntBASIC6.9□□□□□ -1.3
TRIM47Q96LD4 AL132765.1-201ENST00000434165 553 ntBASIC6.9□□□□□ -1.3
TRIM47Q96LD4 CYCSP51-201ENST00000443545 318 ntBASIC6.9□□□□□ -1.3
TRIM47Q96LD4 AL590664.1-201ENST00000448065 339 ntBASIC6.9□□□□□ -1.3
TRIM47Q96LD4 AC104306.1-201ENST00000449702 371 ntBASIC6.9□□□□□ -1.3
TRIM47Q96LD4 AC016027.4-201ENST00000450866 277 ntBASIC6.9□□□□□ -1.3
TRIM47Q96LD4 BTF3P5-201ENST00000457252 467 ntBASIC6.9□□□□□ -1.3
TRIM47Q96LD4 RNU7-63P-201ENST00000459054 62 ntBASIC6.9□□□□□ -1.3
TRIM47Q96LD4 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC6.9□□□□□ -1.3
TRIM47Q96LD4 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
TRIM47Q96LD4 AC092451.1-201ENST00000480211 153 ntBASIC6.9□□□□□ -1.3
TRIM47Q96LD4 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
TRIM47Q96LD4 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC6.9□□□□□ -1.3
TRIM47Q96LD4 RNA5SP116-201ENST00000516132 98 ntBASIC6.9□□□□□ -1.3
TRIM47Q96LD4 RNU6-416P-201ENST00000516265 103 ntBASIC6.9□□□□□ -1.3
TRIM47Q96LD4 RNA5SP92-201ENST00000516437 110 ntBASIC6.9□□□□□ -1.3
TRIM47Q96LD4 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.9□□□□□ -1.3
TRIM47Q96LD4 DEFB131D-201ENST00000526803 184 ntBASIC6.9□□□□□ -1.3
TRIM47Q96LD4 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.9□□□□□ -1.3
TRIM47Q96LD4 SLC2A13P1-201ENST00000531560 322 ntBASIC6.9□□□□□ -1.3
TRIM47Q96LD4 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.9□□□□□ -1.3
TRIM47Q96LD4 AP002373.2-201ENST00000541631 1060 ntBASIC6.9□□□□□ -1.3
TRIM47Q96LD4 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.9□□□□□ -1.3
TRIM47Q96LD4 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.9□□□□□ -1.3
TRIM47Q96LD4 HMGB1P6-201ENST00000569046 646 ntBASIC6.9□□□□□ -1.3
TRIM47Q96LD4 AC090312.2-201ENST00000582687 378 ntBASIC6.9□□□□□ -1.3
TRIM47Q96LD4 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC6.9□□□□□ -1.3
TRIM47Q96LD4 TPMTP1-201ENST00000592307 737 ntBASIC6.9□□□□□ -1.3
TRIM47Q96LD4 AC104695.3-201ENST00000604052 296 ntBASIC6.9□□□□□ -1.3
TRIM47Q96LD4 AC024940.4-201ENST00000605507 246 ntBASIC6.9□□□□□ -1.3
TRIM47Q96LD4 AC008115.3-201ENST00000614874 549 ntBASIC6.9□□□□□ -1.3
TRIM47Q96LD4 CU639417.4-201ENST00000623928 207 ntBASIC6.9□□□□□ -1.3
TRIM47Q96LD4 AL512643.1-201ENST00000635735 524 ntBASIC6.9□□□□□ -1.3
TRIM47Q96LD4 MKKS-204ENST00000639674 192 ntBASIC6.9□□□□□ -1.3
TRIM47Q96LD4 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.9□□□□□ -1.3
TRIM47Q96LD4 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
TRIM47Q96LD4 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.9□□□□□ -1.31
TRIM47Q96LD4 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
TRIM47Q96LD4 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
TRIM47Q96LD4 AC006020.1-201ENST00000420179 1854 ntBASIC6.9□□□□□ -1.31
TRIM47Q96LD4 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM47Q96LD4 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM47Q96LD4 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.89□□□□□ -1.31
TRIM47Q96LD4 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM47Q96LD4 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM47Q96LD4 SELENOWP1-201ENST00000322792 252 ntBASIC6.89□□□□□ -1.31
TRIM47Q96LD4 Y_RNA.255-201ENST00000364581 97 ntBASIC6.89□□□□□ -1.31
TRIM47Q96LD4 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms