Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AC073968.1-201ENST00000618594 637 ntBASIC4.16□□□□□ -1.74
VMP1Q96GC9 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.16□□□□□ -1.74
VMP1Q96GC9 AP000943.4-201ENST00000622912 357 ntBASIC4.16□□□□□ -1.74
VMP1Q96GC9 AL359715.5-201ENST00000623431 443 ntBASIC4.16□□□□□ -1.74
VMP1Q96GC9 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.16□□□□□ -1.74
VMP1Q96GC9 AC027287.1-201ENST00000553115 1453 ntBASIC4.16□□□□□ -1.74
VMP1Q96GC9 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
VMP1Q96GC9 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VMP1Q96GC9 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
VMP1Q96GC9 AC005261.4-201ENST00000600047 1385 ntBASIC4.15□□□□□ -1.74
VMP1Q96GC9 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.74
VMP1Q96GC9 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
VMP1Q96GC9 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
VMP1Q96GC9 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
VMP1Q96GC9 RNA5SP295-201ENST00000362655 121 ntBASIC4.15□□□□□ -1.75
VMP1Q96GC9 RNU6-989P-201ENST00000362756 107 ntBASIC4.15□□□□□ -1.75
VMP1Q96GC9 RNU6-582P-201ENST00000362989 107 ntBASIC4.15□□□□□ -1.75
VMP1Q96GC9 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.75
VMP1Q96GC9 RNU1-44P-201ENST00000384453 163 ntBASIC4.15□□□□□ -1.75
VMP1Q96GC9 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
VMP1Q96GC9 MTHFD2P2-201ENST00000407725 247 ntBASIC4.15□□□□□ -1.75
VMP1Q96GC9 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.15□□□□□ -1.75
VMP1Q96GC9 AC062016.2-201ENST00000420950 676 ntBASIC4.15□□□□□ -1.75
VMP1Q96GC9 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.15□□□□□ -1.75
VMP1Q96GC9 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.15□□□□□ -1.75
VMP1Q96GC9 AC016712.1-201ENST00000431088 378 ntBASIC4.15□□□□□ -1.75
VMP1Q96GC9 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.15□□□□□ -1.75
VMP1Q96GC9 MRPS18BP2-201ENST00000434310 759 ntBASIC4.15□□□□□ -1.75
VMP1Q96GC9 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.15□□□□□ -1.75
VMP1Q96GC9 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.15□□□□□ -1.75
VMP1Q96GC9 AL662791.1-201ENST00000441992 928 ntBASIC4.15□□□□□ -1.75
VMP1Q96GC9 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.15□□□□□ -1.75
VMP1Q96GC9 VN1R32P-201ENST00000452234 905 ntBASIC4.15□□□□□ -1.75
VMP1Q96GC9 NPM1P13-201ENST00000452663 865 ntBASIC4.15□□□□□ -1.75
VMP1Q96GC9 RPL23AP24-201ENST00000458203 385 ntBASIC4.15□□□□□ -1.75
VMP1Q96GC9 RPS27AP17-201ENST00000463344 455 ntBASIC4.15□□□□□ -1.75
VMP1Q96GC9 AC053481.1-201ENST00000467217 306 ntBASIC4.15□□□□□ -1.75
VMP1Q96GC9 RN7SL810P-201ENST00000493031 276 ntBASIC4.15□□□□□ -1.75
VMP1Q96GC9 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.15□□□□□ -1.75
VMP1Q96GC9 HMGB3P15-201ENST00000507326 574 ntBASIC4.15□□□□□ -1.75
VMP1Q96GC9 AC106806.2-201ENST00000509365 500 ntBASIC4.15□□□□□ -1.75
VMP1Q96GC9 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.15□□□□□ -1.75
VMP1Q96GC9 RN7SKP289-201ENST00000517244 295 ntBASIC4.15□□□□□ -1.75
VMP1Q96GC9 HIGD1AP10-201ENST00000527837 282 ntBASIC4.15□□□□□ -1.75
VMP1Q96GC9 MED28P5-201ENST00000528254 438 ntBASIC4.15□□□□□ -1.75
VMP1Q96GC9 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.15□□□□□ -1.75
VMP1Q96GC9 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.15□□□□□ -1.75
VMP1Q96GC9 AC092451.2-201ENST00000538746 658 ntBASIC4.15□□□□□ -1.75
VMP1Q96GC9 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.15□□□□□ -1.75
VMP1Q96GC9 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
VMP1Q96GC9 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.15□□□□□ -1.75
VMP1Q96GC9 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.15□□□□□ -1.75
VMP1Q96GC9 ZNF971P-201ENST00000562068 1249 ntBASIC4.15□□□□□ -1.75
VMP1Q96GC9 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.15□□□□□ -1.75
VMP1Q96GC9 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.15□□□□□ -1.75
VMP1Q96GC9 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.15□□□□□ -1.75
VMP1Q96GC9 AP002360.3-201ENST00000607673 710 ntBASIC4.15□□□□□ -1.75
VMP1Q96GC9 AC091905.2-201ENST00000623143 306 ntBASIC4.15□□□□□ -1.75
VMP1Q96GC9 AC006963.1-201ENST00000624003 1052 ntBASIC4.15□□□□□ -1.75
VMP1Q96GC9 AL512506.2-201ENST00000624472 458 ntBASIC4.15□□□□□ -1.75
VMP1Q96GC9 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.15□□□□□ -1.75
VMP1Q96GC9 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
VMP1Q96GC9 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
VMP1Q96GC9 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
VMP1Q96GC9 NXPH1-205ENST00000602349 1953 ntBASIC4.14□□□□□ -1.75
VMP1Q96GC9 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VMP1Q96GC9 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
VMP1Q96GC9 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
VMP1Q96GC9 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
VMP1Q96GC9 DBF4P1-201ENST00000412976 1892 ntBASIC4.14□□□□□ -1.75
VMP1Q96GC9 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
VMP1Q96GC9 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VMP1Q96GC9 OR4A15-201ENST00000314706 1035 ntBASIC4.14□□□□□ -1.75
VMP1Q96GC9 RNA5SP258-201ENST00000362750 119 ntBASIC4.14□□□□□ -1.75
VMP1Q96GC9 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
VMP1Q96GC9 RNU6-730P-201ENST00000383954 104 ntBASIC4.14□□□□□ -1.75
VMP1Q96GC9 U3.22-201ENST00000391120 215 ntBASIC4.14□□□□□ -1.75
VMP1Q96GC9 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.14□□□□□ -1.75
VMP1Q96GC9 FCF1P2-201ENST00000415284 583 ntBASIC4.14□□□□□ -1.75
VMP1Q96GC9 FNDC3CP-201ENST00000420795 1155 ntBASIC4.14□□□□□ -1.75
VMP1Q96GC9 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.14□□□□□ -1.75
VMP1Q96GC9 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
VMP1Q96GC9 AC005345.1-201ENST00000431868 217 ntBASIC4.14□□□□□ -1.75
VMP1Q96GC9 KCTD10P1-201ENST00000434203 625 ntBASIC4.14□□□□□ -1.75
VMP1Q96GC9 RPS7P2-201ENST00000435134 607 ntBASIC4.14□□□□□ -1.75
VMP1Q96GC9 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.14□□□□□ -1.75
VMP1Q96GC9 RPS24P6-201ENST00000452670 400 ntBASIC4.14□□□□□ -1.75
VMP1Q96GC9 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.14□□□□□ -1.75
VMP1Q96GC9 AL136097.1-201ENST00000456945 913 ntBASIC4.14□□□□□ -1.75
VMP1Q96GC9 RPL7L1P8-201ENST00000469911 741 ntBASIC4.14□□□□□ -1.75
VMP1Q96GC9 AC010285.1-201ENST00000470580 392 ntBASIC4.14□□□□□ -1.75
VMP1Q96GC9 PPIAP15-201ENST00000479662 484 ntBASIC4.14□□□□□ -1.75
VMP1Q96GC9 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.14□□□□□ -1.75
VMP1Q96GC9 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.14□□□□□ -1.75
VMP1Q96GC9 MTCYBP37-201ENST00000510642 1133 ntBASIC4.14□□□□□ -1.75
VMP1Q96GC9 AC092593.2-201ENST00000513866 913 ntBASIC4.14□□□□□ -1.75
VMP1Q96GC9 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.14□□□□□ -1.75
VMP1Q96GC9 MTCO3P27-201ENST00000514397 196 ntBASIC4.14□□□□□ -1.75
VMP1Q96GC9 RNU6-885P-201ENST00000516607 104 ntBASIC4.14□□□□□ -1.75
VMP1Q96GC9 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms