Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 AC008079.2-201ENST00000623543 20396 ntBASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 RPS24P12-201ENST00000402084 394 ntBASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 ARL4AP5-201ENST00000404372 599 ntBASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 RN7SKP56-201ENST00000410513 331 ntBASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 AC109780.2-201ENST00000413467 845 ntBASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 RPL21P32-201ENST00000419877 477 ntBASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 RPS27AP7-201ENST00000422792 455 ntBASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 RPS27AP14-201ENST00000422868 454 ntBASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 AC096632.1-201ENST00000427395 310 ntBASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 Z74696.2-201ENST00000436514 498 ntBASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 RPL23AP16-201ENST00000441715 421 ntBASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 EEF1E1P1-201ENST00000446998 430 ntBASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 EEF1A1P1-201ENST00000447052 739 ntBASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 SNRPFP4-201ENST00000456366 242 ntBASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 PPIAP21-201ENST00000464473 501 ntBASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 AP000893.1-201ENST00000474462 794 ntBASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 SCARNA22-201ENST00000503991 125 ntBASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 AC006499.2-201ENST00000513470 337 ntBASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 DUXAP2-201ENST00000519198 589 ntBASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 AC068587.4-201ENST00000533893 186 ntBASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 AC093249.4-201ENST00000564755 259 ntBASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 MTND1P15-201ENST00000579262 949 ntBASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 MTATP6P3-201ENST00000581686 676 ntBASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 AP003465.2-201ENST00000602571 373 ntBASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 AC091805.2-201ENST00000603848 235 ntBASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 HSPE1P14-201ENST00000605812 302 ntBASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 AC091953.3-201ENST00000623220 236 ntBASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 ZFRP1-201ENST00000457579 2970 ntBASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CTHRC1Q96CG8 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CTHRC1Q96CG8 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CTHRC1Q96CG8 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CTHRC1Q96CG8 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.47□□□□□ -1.69
CTHRC1Q96CG8 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CTHRC1Q96CG8 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.47□□□□□ -1.69
CTHRC1Q96CG8 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.47□□□□□ -1.69
CTHRC1Q96CG8 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CTHRC1Q96CG8 RNU6-921P-201ENST00000384361 107 ntBASIC4.47□□□□□ -1.69
CTHRC1Q96CG8 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CTHRC1Q96CG8 MTCYBP36-201ENST00000404146 440 ntBASIC4.47□□□□□ -1.69
CTHRC1Q96CG8 VN1R8P-201ENST00000407739 893 ntBASIC4.47□□□□□ -1.69
CTHRC1Q96CG8 RNA5SP113-201ENST00000410486 84 ntBASIC4.47□□□□□ -1.69
CTHRC1Q96CG8 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.47□□□□□ -1.69
CTHRC1Q96CG8 AL158073.1-201ENST00000426848 1104 ntBASIC4.47□□□□□ -1.69
CTHRC1Q96CG8 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.47□□□□□ -1.69
CTHRC1Q96CG8 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.47□□□□□ -1.69
CTHRC1Q96CG8 MTND1P28-201ENST00000435623 950 ntBASIC4.47□□□□□ -1.69
CTHRC1Q96CG8 RPL37P21-201ENST00000435890 276 ntBASIC4.47□□□□□ -1.69
CTHRC1Q96CG8 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.47□□□□□ -1.69
CTHRC1Q96CG8 AC239809.1-201ENST00000450470 217 ntBASIC4.47□□□□□ -1.69
CTHRC1Q96CG8 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.47□□□□□ -1.69
CTHRC1Q96CG8 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.47□□□□□ -1.69
CTHRC1Q96CG8 AP000797.1-201ENST00000478870 387 ntBASIC4.47□□□□□ -1.69
CTHRC1Q96CG8 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.47□□□□□ -1.69
CTHRC1Q96CG8 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.47□□□□□ -1.69
CTHRC1Q96CG8 AC021678.1-201ENST00000505195 936 ntBASIC4.47□□□□□ -1.69
CTHRC1Q96CG8 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.47□□□□□ -1.69
CTHRC1Q96CG8 AC025881.1-201ENST00000518851 512 ntBASIC4.47□□□□□ -1.69
CTHRC1Q96CG8 IGHV3-32-201ENST00000519182 355 ntBASIC4.47□□□□□ -1.69
CTHRC1Q96CG8 ZNF705CP-201ENST00000530515 889 ntBASIC4.47□□□□□ -1.69
CTHRC1Q96CG8 AL139174.1-201ENST00000531489 886 ntBASIC4.47□□□□□ -1.69
CTHRC1Q96CG8 OR6C73P-201ENST00000546432 358 ntBASIC4.47□□□□□ -1.69
CTHRC1Q96CG8 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.47□□□□□ -1.69
CTHRC1Q96CG8 AC074029.1-201ENST00000552531 1044 ntBASIC4.47□□□□□ -1.69
CTHRC1Q96CG8 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.47□□□□□ -1.69
CTHRC1Q96CG8 FKBP1BP1-201ENST00000553366 325 ntBASIC4.47□□□□□ -1.69
CTHRC1Q96CG8 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.47□□□□□ -1.69
CTHRC1Q96CG8 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.47□□□□□ -1.69
CTHRC1Q96CG8 AC141257.3-201ENST00000572906 215 ntBASIC4.47□□□□□ -1.69
CTHRC1Q96CG8 MIR4700-201ENST00000578311 74 ntBASIC4.47□□□□□ -1.69
CTHRC1Q96CG8 MIR4480-201ENST00000582492 71 ntBASIC4.47□□□□□ -1.69
CTHRC1Q96CG8 AC005771.1-201ENST00000585581 349 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms