Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 RPL23AP29-201ENST00000397284 453 ntBASIC4.59□□□□□ -1.67
HMGB4Q8WW32 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HMGB4Q8WW32 AP000580.1-201ENST00000404439 358 ntBASIC4.59□□□□□ -1.67
HMGB4Q8WW32 ZNF603P-201ENST00000405613 487 ntBASIC4.59□□□□□ -1.67
HMGB4Q8WW32 PIGPP2-201ENST00000411569 458 ntBASIC4.59□□□□□ -1.67
HMGB4Q8WW32 RAD23BP1-201ENST00000421404 1227 ntBASIC4.59□□□□□ -1.67
HMGB4Q8WW32 AC096632.1-201ENST00000427395 310 ntBASIC4.59□□□□□ -1.67
HMGB4Q8WW32 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
HMGB4Q8WW32 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.59□□□□□ -1.67
HMGB4Q8WW32 PHBP16-201ENST00000446318 950 ntBASIC4.59□□□□□ -1.67
HMGB4Q8WW32 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HMGB4Q8WW32 MTND2P19-201ENST00000449129 1012 ntBASIC4.59□□□□□ -1.67
HMGB4Q8WW32 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.59□□□□□ -1.67
HMGB4Q8WW32 AC010301.1-201ENST00000473936 355 ntBASIC4.59□□□□□ -1.67
HMGB4Q8WW32 OR4G11P-201ENST00000492842 939 ntBASIC4.59□□□□□ -1.67
HMGB4Q8WW32 SNX5P1-201ENST00000505757 1041 ntBASIC4.59□□□□□ -1.67
HMGB4Q8WW32 AC111000.2-201ENST00000507775 550 ntBASIC4.59□□□□□ -1.67
HMGB4Q8WW32 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.59□□□□□ -1.67
HMGB4Q8WW32 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.59□□□□□ -1.67
HMGB4Q8WW32 MTCYBP37-201ENST00000510642 1133 ntBASIC4.59□□□□□ -1.67
HMGB4Q8WW32 HMGB3P13-201ENST00000511263 607 ntBASIC4.59□□□□□ -1.67
HMGB4Q8WW32 RNU6-513P-201ENST00000516104 104 ntBASIC4.59□□□□□ -1.67
HMGB4Q8WW32 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.59□□□□□ -1.67
HMGB4Q8WW32 MRPL49P2-201ENST00000521066 465 ntBASIC4.59□□□□□ -1.67
HMGB4Q8WW32 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.59□□□□□ -1.67
HMGB4Q8WW32 OR4A12P-201ENST00000530847 918 ntBASIC4.59□□□□□ -1.67
HMGB4Q8WW32 CYCSP29-201ENST00000533731 318 ntBASIC4.59□□□□□ -1.67
HMGB4Q8WW32 AL356057.1-201ENST00000533798 831 ntBASIC4.59□□□□□ -1.67
HMGB4Q8WW32 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
HMGB4Q8WW32 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.59□□□□□ -1.67
HMGB4Q8WW32 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.59□□□□□ -1.67
HMGB4Q8WW32 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.59□□□□□ -1.67
HMGB4Q8WW32 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.59□□□□□ -1.67
HMGB4Q8WW32 PSMB7P1-201ENST00000556349 514 ntBASIC4.59□□□□□ -1.67
HMGB4Q8WW32 AC124068.1-201ENST00000563131 678 ntBASIC4.59□□□□□ -1.67
HMGB4Q8WW32 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.59□□□□□ -1.67
HMGB4Q8WW32 VN1R85P-201ENST00000601587 426 ntBASIC4.59□□□□□ -1.67
HMGB4Q8WW32 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HMGB4Q8WW32 AC018714.1-201ENST00000605028 208 ntBASIC4.59□□□□□ -1.67
HMGB4Q8WW32 AC024941.1-201ENST00000612250 334 ntBASIC4.59□□□□□ -1.67
HMGB4Q8WW32 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.59□□□□□ -1.67
HMGB4Q8WW32 AL161637.1-201ENST00000622380 412 ntBASIC4.59□□□□□ -1.67
HMGB4Q8WW32 AC092184.1-201ENST00000625042 715 ntBASIC4.59□□□□□ -1.67
HMGB4Q8WW32 AL391684.1-202ENST00000641293 1636 ntBASIC4.59□□□□□ -1.67
HMGB4Q8WW32 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
HMGB4Q8WW32 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
HMGB4Q8WW32 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.68
HMGB4Q8WW32 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.59□□□□□ -1.68
HMGB4Q8WW32 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
HMGB4Q8WW32 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HMGB4Q8WW32 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HMGB4Q8WW32 ASNSP1-201ENST00000518311 1939 ntBASIC4.58□□□□□ -1.68
HMGB4Q8WW32 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HMGB4Q8WW32 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
HMGB4Q8WW32 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HMGB4Q8WW32 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
HMGB4Q8WW32 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
HMGB4Q8WW32 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
HMGB4Q8WW32 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.58□□□□□ -1.68
HMGB4Q8WW32 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.58□□□□□ -1.68
HMGB4Q8WW32 ZNF37BP-203ENST00000452306 1352 ntBASIC4.58□□□□□ -1.68
HMGB4Q8WW32 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.58□□□□□ -1.68
HMGB4Q8WW32 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.58□□□□□ -1.68
HMGB4Q8WW32 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HMGB4Q8WW32 RNU6-1243P-201ENST00000364028 107 ntBASIC4.58□□□□□ -1.68
HMGB4Q8WW32 RN7SKP224-201ENST00000364140 325 ntBASIC4.58□□□□□ -1.68
HMGB4Q8WW32 RNU6-1122P-201ENST00000384449 107 ntBASIC4.58□□□□□ -1.68
HMGB4Q8WW32 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.58□□□□□ -1.68
HMGB4Q8WW32 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.58□□□□□ -1.68
HMGB4Q8WW32 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.58□□□□□ -1.68
HMGB4Q8WW32 AL390023.1-201ENST00000428836 262 ntBASIC4.58□□□□□ -1.68
HMGB4Q8WW32 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.58□□□□□ -1.68
HMGB4Q8WW32 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.58□□□□□ -1.68
HMGB4Q8WW32 AC004938.1-201ENST00000438468 308 ntBASIC4.58□□□□□ -1.68
HMGB4Q8WW32 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.58□□□□□ -1.68
HMGB4Q8WW32 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.58□□□□□ -1.68
HMGB4Q8WW32 TRGVB-201ENST00000453257 471 ntBASIC4.58□□□□□ -1.68
HMGB4Q8WW32 RN7SL98P-201ENST00000462271 300 ntBASIC4.58□□□□□ -1.68
HMGB4Q8WW32 AC105137.1-201ENST00000484355 562 ntBASIC4.58□□□□□ -1.68
HMGB4Q8WW32 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.58□□□□□ -1.68
HMGB4Q8WW32 ATP1B1P1-201ENST00000509767 915 ntBASIC4.58□□□□□ -1.68
HMGB4Q8WW32 AC093281.2-201ENST00000510153 597 ntBASIC4.58□□□□□ -1.68
HMGB4Q8WW32 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.58□□□□□ -1.68
HMGB4Q8WW32 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.58□□□□□ -1.68
HMGB4Q8WW32 RNU6-759P-201ENST00000516740 103 ntBASIC4.58□□□□□ -1.68
HMGB4Q8WW32 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.58□□□□□ -1.68
HMGB4Q8WW32 AC134698.5-201ENST00000519444 336 ntBASIC4.58□□□□□ -1.68
HMGB4Q8WW32 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.58□□□□□ -1.68
HMGB4Q8WW32 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.58□□□□□ -1.68
HMGB4Q8WW32 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.58□□□□□ -1.68
HMGB4Q8WW32 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.58□□□□□ -1.68
HMGB4Q8WW32 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.58□□□□□ -1.68
HMGB4Q8WW32 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.58□□□□□ -1.68
HMGB4Q8WW32 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.58□□□□□ -1.68
HMGB4Q8WW32 AC010620.1-201ENST00000601088 1102 ntBASIC4.58□□□□□ -1.68
HMGB4Q8WW32 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.58□□□□□ -1.68
HMGB4Q8WW32 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.58□□□□□ -1.68
HMGB4Q8WW32 AC004223.4-201ENST00000612426 332 ntBASIC4.58□□□□□ -1.68
HMGB4Q8WW32 AL445567.2-201ENST00000618935 498 ntBASIC4.58□□□□□ -1.68
HMGB4Q8WW32 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms