Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AC124016.2-201ENST00000610058 665 ntBASIC3.29□□□□□ -1.88
CCDC71LQ8N9Z2 AC016769.4-201ENST00000616893 535 ntBASIC3.29□□□□□ -1.88
CCDC71LQ8N9Z2 AC090510.2-201ENST00000617465 629 ntBASIC3.29□□□□□ -1.88
CCDC71LQ8N9Z2 AC022079.2-201ENST00000619739 566 ntBASIC3.29□□□□□ -1.88
CCDC71LQ8N9Z2 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC71LQ8N9Z2 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC71LQ8N9Z2 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.29□□□□□ -1.88
CCDC71LQ8N9Z2 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CCDC71LQ8N9Z2 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC71LQ8N9Z2 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC71LQ8N9Z2 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC71LQ8N9Z2 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CCDC71LQ8N9Z2 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC71LQ8N9Z2 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC71LQ8N9Z2 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 RPS4XP5-202ENST00000449995 1334 ntBASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 XPOTP1-201ENST00000443317 2398 ntBASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 AC234772.1-201ENST00000377927 937 ntBASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 SNORA70E-201ENST00000384492 135 ntBASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 RNU6-925P-201ENST00000384629 104 ntBASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 MIR591-201ENST00000385290 95 ntBASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 AL603865.2-201ENST00000401679 213 ntBASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 RSL24D1P1-201ENST00000404972 493 ntBASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 MTCO3P31-201ENST00000405526 789 ntBASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 RPL37P18-201ENST00000411602 243 ntBASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 TAF13P2-201ENST00000416876 286 ntBASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 RPEP3-201ENST00000425462 676 ntBASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 RPS7P2-201ENST00000435134 607 ntBASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 OR51B8P-201ENST00000449892 769 ntBASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 RPL7P61-201ENST00000451721 751 ntBASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 Z95152.1-201ENST00000453556 656 ntBASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 RN7SL329P-201ENST00000467740 299 ntBASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 PRDX3P4-201ENST00000470828 747 ntBASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 SUMO2P5-201ENST00000506790 245 ntBASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 AC021146.1-201ENST00000511202 716 ntBASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 AC099522.1-202ENST00000514718 367 ntBASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 RN7SKP83-201ENST00000516512 178 ntBASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 RN7SKP209-201ENST00000516888 304 ntBASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 RN7SKP277-201ENST00000516895 283 ntBASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 PDCL2P2-201ENST00000533651 189 ntBASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 AC004217.3-201ENST00000551552 878 ntBASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 CENPUP2-201ENST00000555897 1186 ntBASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 AC099489.2-201ENST00000574976 260 ntBASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 MIR3186-201ENST00000577404 85 ntBASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 MIR4504-201ENST00000577413 92 ntBASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 AC010928.3-201ENST00000587712 541 ntBASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 RPL12P25-202ENST00000598100 674 ntBASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 AC234771.5-201ENST00000600161 514 ntBASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 AC068790.7-201ENST00000602347 528 ntBASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 BRDTP1-201ENST00000605735 677 ntBASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 AC004808.1-201ENST00000627671 721 ntBASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 AL121594.5-201ENST00000631724 573 ntBASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 AC099654.8-201ENST00000637757 681 ntBASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 TNPO1P3-201ENST00000436471 2662 ntBASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC71LQ8N9Z2 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
CCDC71LQ8N9Z2 AL157700.1-201ENST00000561973 1432 ntBASIC3.27□□□□□ -1.89
CCDC71LQ8N9Z2 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
CCDC71LQ8N9Z2 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC71LQ8N9Z2 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC71LQ8N9Z2 CASC19-261ENST00000641853 1638 ntBASIC3.27□□□□□ -1.89
CCDC71LQ8N9Z2 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC71LQ8N9Z2 RNU5B-1-201ENST00000363286 116 ntBASIC3.27□□□□□ -1.89
CCDC71LQ8N9Z2 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC71LQ8N9Z2 SNORA51.12-201ENST00000384448 134 ntBASIC3.27□□□□□ -1.89
CCDC71LQ8N9Z2 DSTNP4-201ENST00000399472 474 ntBASIC3.27□□□□□ -1.89
CCDC71LQ8N9Z2 RPS3AP23-201ENST00000401762 784 ntBASIC3.27□□□□□ -1.89
CCDC71LQ8N9Z2 MIR1178-201ENST00000408396 91 ntBASIC3.27□□□□□ -1.89
CCDC71LQ8N9Z2 AC096533.1-201ENST00000411645 353 ntBASIC3.27□□□□□ -1.89
CCDC71LQ8N9Z2 UBE2V1P9-201ENST00000414760 368 ntBASIC3.27□□□□□ -1.89
CCDC71LQ8N9Z2 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms