Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 AC012498.1-201ENST00000424037 437 ntBASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 RPL31P35-201ENST00000431058 377 ntBASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 OR52B5P-201ENST00000435337 951 ntBASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 C1DP4-201ENST00000455429 424 ntBASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 OR5H5P-201ENST00000503164 928 ntBASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 AC024589.1-201ENST00000512207 263 ntBASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 AC104986.1-201ENST00000517978 436 ntBASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 AP003181.2-201ENST00000528941 181 ntBASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 GLYCAM1-201ENST00000546596 285 ntBASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 MIR5186-201ENST00000577504 120 ntBASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 RN7SL356P-201ENST00000582228 248 ntBASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 AL139124.1-201ENST00000609123 421 ntBASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 U6.101-201ENST00000637707 76 ntBASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 AC007938.2-201ENST00000604666 2634 ntBASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 OR55B1P-203ENST00000641518 2602 ntBASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.22□□□□□ -1.57
TRIM48Q8IWZ4 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.21□□□□□ -1.57
TRIM48Q8IWZ4 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
TRIM48Q8IWZ4 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
TRIM48Q8IWZ4 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
TRIM48Q8IWZ4 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 RN7SKP145-201ENST00000363291 303 ntBASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 Y_RNA.160-201ENST00000363677 92 ntBASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 RNU1-43P-201ENST00000365052 165 ntBASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 RPS20P2-201ENST00000402520 389 ntBASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 OR4K12P-201ENST00000406538 961 ntBASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 MTND1P14-201ENST00000427400 950 ntBASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 BRWD1P3-201ENST00000428816 390 ntBASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 AC002486.1-201ENST00000435098 391 ntBASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 RSU1P2-202ENST00000437884 485 ntBASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 AL645937.3-201ENST00000453647 936 ntBASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 UBDP1-202ENST00000457888 382 ntBASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 RPL7AP10-201ENST00000481016 791 ntBASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 AC010493.1-201ENST00000513479 292 ntBASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 SOD1P3-201ENST00000518682 454 ntBASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 OR5M2P-201ENST00000529003 936 ntBASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 AC022832.1-201ENST00000530718 645 ntBASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 AC093591.2-201ENST00000565254 3843 ntBASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 AC090312.1-201ENST00000580637 348 ntBASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 AC090948.2-201ENST00000607363 564 ntBASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 AC007742.2-201ENST00000618226 398 ntBASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 AL445264.1-201ENST00000621719 171 ntBASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms