Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 Y_RNA.693-201ENST00000516641 110 ntBASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 RNU6-445P-201ENST00000516949 107 ntBASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 RN7SKP99-201ENST00000517028 307 ntBASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 AC126177.5-201ENST00000549599 178 ntBASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 SUB1P2-201ENST00000556401 297 ntBASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 AC025678.1-201ENST00000567861 338 ntBASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 AC060771.1-201ENST00000582031 164 ntBASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 NRBF2P5-201ENST00000603087 788 ntBASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 YWHAQP7-201ENST00000603536 658 ntBASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 AC000068.2-201ENST00000608816 460 ntBASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 AC010338.1-201ENST00000621823 717 ntBASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 AC019278.1-201ENST00000623516 479 ntBASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 AC139792.3-201ENST00000623525 224 ntBASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.09□□□□□ -1.43
NPAS4Q8IUM7 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
NPAS4Q8IUM7 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
NPAS4Q8IUM7 BCLAF1P2-201ENST00000624956 2609 ntBASIC6.09□□□□□ -1.44
NPAS4Q8IUM7 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
NPAS4Q8IUM7 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
NPAS4Q8IUM7 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 Y_RNA.160-201ENST00000363677 92 ntBASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 MIR551A-201ENST00000385042 96 ntBASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 RNU6-780P-201ENST00000391030 104 ntBASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 FABP7P1-201ENST00000424004 391 ntBASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 AC019097.1-201ENST00000424783 735 ntBASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 MTCO1P20-201ENST00000425366 358 ntBASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 Z95327.1-201ENST00000446082 482 ntBASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 MTND1P9-201ENST00000453775 944 ntBASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 AL445687.2-201ENST00000458156 728 ntBASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 RN7SL222P-201ENST00000476452 299 ntBASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 DUTP1-201ENST00000493631 470 ntBASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 RPS4XP18-201ENST00000495480 763 ntBASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 HMGN1P12-201ENST00000499125 195 ntBASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 COX7A2P2-201ENST00000505291 250 ntBASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 RNA5SP116-201ENST00000516132 98 ntBASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 ARL1-211ENST00000551828 776 ntTSL 5 BASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 MIR4311-201ENST00000580794 100 ntBASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 AC068790.5-201ENST00000602741 355 ntBASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 VPS8-228ENST00000628962 207 ntTSL 5 BASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 MIR1321-201ENST00000637766 79 ntBASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 MTND5P33-201ENST00000571250 1450 ntBASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
NPAS4Q8IUM7 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
NPAS4Q8IUM7 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NPAS4Q8IUM7 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NPAS4Q8IUM7 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
NPAS4Q8IUM7 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
NPAS4Q8IUM7 AC009902.3-201ENST00000606235 2172 ntBASIC6.07□□□□□ -1.44
NPAS4Q8IUM7 AL731532.1-201ENST00000623972 4236 ntBASIC6.07□□□□□ -1.44
NPAS4Q8IUM7 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
NPAS4Q8IUM7 AL672167.1-205ENST00000641112 3080 ntBASIC6.07□□□□□ -1.44
NPAS4Q8IUM7 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NPAS4Q8IUM7 RNU5E-1-201ENST00000362477 120 ntBASIC6.07□□□□□ -1.44
NPAS4Q8IUM7 RNA5SP335-201ENST00000363817 110 ntBASIC6.07□□□□□ -1.44
NPAS4Q8IUM7 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
NPAS4Q8IUM7 RN7SKP213-201ENST00000410746 298 ntBASIC6.07□□□□□ -1.44
NPAS4Q8IUM7 RPL21P111-201ENST00000418453 477 ntBASIC6.07□□□□□ -1.44
NPAS4Q8IUM7 ELOCP4-201ENST00000420090 333 ntBASIC6.07□□□□□ -1.44
NPAS4Q8IUM7 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.07□□□□□ -1.44
NPAS4Q8IUM7 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC6.07□□□□□ -1.44
NPAS4Q8IUM7 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.07□□□□□ -1.44
NPAS4Q8IUM7 OR52B5P-201ENST00000435337 951 ntBASIC6.07□□□□□ -1.44
NPAS4Q8IUM7 AC004453.1-201ENST00000487895 408 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms