Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PRPF39Q86UA1 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
PRPF39Q86UA1 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.36□□□□□ -1.71
PRPF39Q86UA1 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PRPF39Q86UA1 Z99496.1-201ENST00000469424 1477 ntBASIC4.36□□□□□ -1.71
PRPF39Q86UA1 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PRPF39Q86UA1 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.36□□□□□ -1.71
PRPF39Q86UA1 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
PRPF39Q86UA1 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.35□□□□□ -1.71
PRPF39Q86UA1 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PRPF39Q86UA1 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PRPF39Q86UA1 AC007390.2-201ENST00000606229 3803 ntBASIC4.35□□□□□ -1.71
PRPF39Q86UA1 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
PRPF39Q86UA1 PNPT1P2-201ENST00000456768 2050 ntBASIC4.35□□□□□ -1.71
PRPF39Q86UA1 RNU6-1066P-201ENST00000363573 105 ntBASIC4.35□□□□□ -1.71
PRPF39Q86UA1 RNU6-374P-201ENST00000364146 108 ntBASIC4.35□□□□□ -1.71
PRPF39Q86UA1 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PRPF39Q86UA1 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PRPF39Q86UA1 AL023807.1-201ENST00000407932 359 ntBASIC4.35□□□□□ -1.71
PRPF39Q86UA1 AL136133.1-201ENST00000413694 376 ntBASIC4.35□□□□□ -1.71
PRPF39Q86UA1 FCF1P2-201ENST00000415284 583 ntBASIC4.35□□□□□ -1.71
PRPF39Q86UA1 MFSD13B-201ENST00000420133 1290 ntBASIC4.35□□□□□ -1.71
PRPF39Q86UA1 AC005517.2-201ENST00000424673 553 ntBASIC4.35□□□□□ -1.71
PRPF39Q86UA1 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.35□□□□□ -1.71
PRPF39Q86UA1 AL512326.1-201ENST00000443050 721 ntBASIC4.35□□□□□ -1.71
PRPF39Q86UA1 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.35□□□□□ -1.71
PRPF39Q86UA1 AL451050.1-201ENST00000450126 415 ntBASIC4.35□□□□□ -1.71
PRPF39Q86UA1 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.35□□□□□ -1.71
PRPF39Q86UA1 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
PRPF39Q86UA1 RN7SL691P-201ENST00000494487 301 ntBASIC4.35□□□□□ -1.71
PRPF39Q86UA1 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PRPF39Q86UA1 AC096571.1-202ENST00000506634 735 ntBASIC4.35□□□□□ -1.71
PRPF39Q86UA1 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.35□□□□□ -1.71
PRPF39Q86UA1 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.35□□□□□ -1.71
PRPF39Q86UA1 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.35□□□□□ -1.71
PRPF39Q86UA1 ARL2BPP5-201ENST00000523141 481 ntBASIC4.35□□□□□ -1.71
PRPF39Q86UA1 OR4A45P-201ENST00000529954 901 ntBASIC4.35□□□□□ -1.71
PRPF39Q86UA1 AC006064.5-201ENST00000541782 248 ntBASIC4.35□□□□□ -1.71
PRPF39Q86UA1 AC084824.1-201ENST00000550917 1005 ntBASIC4.35□□□□□ -1.71
PRPF39Q86UA1 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.35□□□□□ -1.71
PRPF39Q86UA1 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PRPF39Q86UA1 VN1R85P-201ENST00000601587 426 ntBASIC4.35□□□□□ -1.71
PRPF39Q86UA1 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.35□□□□□ -1.71
PRPF39Q86UA1 AC067959.1-201ENST00000604334 379 ntBASIC4.35□□□□□ -1.71
PRPF39Q86UA1 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.35□□□□□ -1.71
PRPF39Q86UA1 AL513477.2-201ENST00000607858 568 ntBASIC4.35□□□□□ -1.71
PRPF39Q86UA1 AC064801.1-201ENST00000612025 407 ntBASIC4.35□□□□□ -1.71
PRPF39Q86UA1 AC024941.1-201ENST00000612250 334 ntBASIC4.35□□□□□ -1.71
PRPF39Q86UA1 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PRPF39Q86UA1 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.35□□□□□ -1.71
PRPF39Q86UA1 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.35□□□□□ -1.71
PRPF39Q86UA1 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PRPF39Q86UA1 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PRPF39Q86UA1 MTCO1P14-201ENST00000441695 1559 ntBASIC4.35□□□□□ -1.71
PRPF39Q86UA1 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.35□□□□□ -1.71
PRPF39Q86UA1 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
PRPF39Q86UA1 ZNF962P-201ENST00000443465 3140 ntBASIC4.35□□□□□ -1.71
PRPF39Q86UA1 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.34□□□□□ -1.71
PRPF39Q86UA1 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
PRPF39Q86UA1 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PRPF39Q86UA1 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PRPF39Q86UA1 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.34□□□□□ -1.71
PRPF39Q86UA1 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.34□□□□□ -1.71
PRPF39Q86UA1 Y_RNA.126-201ENST00000363382 111 ntBASIC4.34□□□□□ -1.71
PRPF39Q86UA1 RNVU1-3-201ENST00000364313 161 ntBASIC4.34□□□□□ -1.71
PRPF39Q86UA1 RNA5SP515-201ENST00000364570 118 ntBASIC4.34□□□□□ -1.71
PRPF39Q86UA1 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
PRPF39Q86UA1 MT-TC-201ENST00000387405 66 ntBASIC4.34□□□□□ -1.71
PRPF39Q86UA1 MIR708-201ENST00000390708 88 ntBASIC4.34□□□□□ -1.71
PRPF39Q86UA1 MTCO1P56-201ENST00000401674 224 ntBASIC4.34□□□□□ -1.71
PRPF39Q86UA1 AL022722.2-201ENST00000402519 180 ntBASIC4.34□□□□□ -1.71
PRPF39Q86UA1 AL079342.2-201ENST00000403367 482 ntBASIC4.34□□□□□ -1.71
PRPF39Q86UA1 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.34□□□□□ -1.71
PRPF39Q86UA1 SNORA11-201ENST00000408789 128 ntBASIC4.34□□□□□ -1.71
PRPF39Q86UA1 AL449283.1-202ENST00000418249 604 ntBASIC4.34□□□□□ -1.71
PRPF39Q86UA1 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.34□□□□□ -1.71
PRPF39Q86UA1 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.34□□□□□ -1.71
PRPF39Q86UA1 RPS6P14-201ENST00000425165 719 ntBASIC4.34□□□□□ -1.71
PRPF39Q86UA1 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PRPF39Q86UA1 GTF2IP3-201ENST00000433887 494 ntBASIC4.34□□□□□ -1.71
PRPF39Q86UA1 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.34□□□□□ -1.71
PRPF39Q86UA1 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC4.34□□□□□ -1.71
PRPF39Q86UA1 ELOCP8-201ENST00000439309 332 ntBASIC4.34□□□□□ -1.71
PRPF39Q86UA1 ELOCP15-201ENST00000442090 332 ntBASIC4.34□□□□□ -1.71
PRPF39Q86UA1 RPL23AP81-201ENST00000455252 467 ntBASIC4.34□□□□□ -1.71
PRPF39Q86UA1 VPS26AP1-201ENST00000483197 979 ntBASIC4.34□□□□□ -1.71
PRPF39Q86UA1 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.34□□□□□ -1.71
PRPF39Q86UA1 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.34□□□□□ -1.71
PRPF39Q86UA1 AC025554.1-201ENST00000505641 188 ntBASIC4.34□□□□□ -1.71
PRPF39Q86UA1 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.34□□□□□ -1.71
PRPF39Q86UA1 AC119751.4-201ENST00000507498 357 ntBASIC4.34□□□□□ -1.71
PRPF39Q86UA1 AC008958.1-201ENST00000511047 682 ntBASIC4.34□□□□□ -1.71
PRPF39Q86UA1 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.34□□□□□ -1.71
PRPF39Q86UA1 Vault.1-201ENST00000516474 102 ntBASIC4.34□□□□□ -1.71
PRPF39Q86UA1 AC091163.3-201ENST00000518269 1144 ntBASIC4.34□□□□□ -1.71
PRPF39Q86UA1 AC021451.1-201ENST00000523498 1129 ntBASIC4.34□□□□□ -1.71
PRPF39Q86UA1 AP001317.1-201ENST00000531194 960 ntBASIC4.34□□□□□ -1.71
PRPF39Q86UA1 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.34□□□□□ -1.71
PRPF39Q86UA1 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4.34□□□□□ -1.71
PRPF39Q86UA1 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms