Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AC099063.3-201ENST00000642066 185 ntBASIC2.16□□□□□ -2.06
CSMD3Q7Z407 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CSMD3Q7Z407 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CSMD3Q7Z407 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC2.16□□□□□ -2.06
CSMD3Q7Z407 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.16□□□□□ -2.06
CSMD3Q7Z407 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC2.16□□□□□ -2.06
CSMD3Q7Z407 MTND4P26-201ENST00000415971 1359 ntBASIC2.16□□□□□ -2.06
CSMD3Q7Z407 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC2.16□□□□□ -2.06
CSMD3Q7Z407 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CSMD3Q7Z407 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CSMD3Q7Z407 MIR93-201ENST00000385024 80 ntBASIC2.16□□□□□ -2.06
CSMD3Q7Z407 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.16□□□□□ -2.06
CSMD3Q7Z407 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC2.16□□□□□ -2.06
CSMD3Q7Z407 AC073069.1-201ENST00000428657 441 ntBASIC2.16□□□□□ -2.06
CSMD3Q7Z407 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC2.16□□□□□ -2.06
CSMD3Q7Z407 AL139415.2-201ENST00000431968 163 ntBASIC2.16□□□□□ -2.06
CSMD3Q7Z407 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC2.16□□□□□ -2.06
CSMD3Q7Z407 VN1R48P-201ENST00000448149 1036 ntBASIC2.16□□□□□ -2.06
CSMD3Q7Z407 FCF1P8-201ENST00000510322 597 ntBASIC2.16□□□□□ -2.06
CSMD3Q7Z407 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CSMD3Q7Z407 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.16□□□□□ -2.06
CSMD3Q7Z407 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC2.16□□□□□ -2.06
CSMD3Q7Z407 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CSMD3Q7Z407 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CSMD3Q7Z407 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.15□□□□□ -2.06
CSMD3Q7Z407 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC2.15□□□□□ -2.06
CSMD3Q7Z407 AL592148.1-201ENST00000413568 445 ntBASIC2.15□□□□□ -2.06
CSMD3Q7Z407 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC2.15□□□□□ -2.06
CSMD3Q7Z407 RNA5SP154-201ENST00000516193 111 ntBASIC2.15□□□□□ -2.06
CSMD3Q7Z407 EEF1A1P37-201ENST00000522748 715 ntBASIC2.15□□□□□ -2.06
CSMD3Q7Z407 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.15□□□□□ -2.06
CSMD3Q7Z407 AC017002.4-201ENST00000604721 1525 ntBASIC2.15□□□□□ -2.06
CSMD3Q7Z407 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
CSMD3Q7Z407 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CSMD3Q7Z407 AC104446.1-201ENST00000613728 1321 ntBASIC2.15□□□□□ -2.07
CSMD3Q7Z407 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.15□□□□□ -2.07
CSMD3Q7Z407 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CSMD3Q7Z407 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CSMD3Q7Z407 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CSMD3Q7Z407 FAM133CP-201ENST00000332869 704 ntBASIC2.15□□□□□ -2.07
CSMD3Q7Z407 RNU6-316P-201ENST00000391027 107 ntBASIC2.15□□□□□ -2.07
CSMD3Q7Z407 ARL5AP4-201ENST00000430731 512 ntBASIC2.15□□□□□ -2.07
CSMD3Q7Z407 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.15□□□□□ -2.07
CSMD3Q7Z407 AC022795.1-201ENST00000473808 480 ntBASIC2.15□□□□□ -2.07
CSMD3Q7Z407 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.15□□□□□ -2.07
CSMD3Q7Z407 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC2.15□□□□□ -2.07
CSMD3Q7Z407 AC023389.2-201ENST00000580031 955 ntBASIC2.15□□□□□ -2.07
CSMD3Q7Z407 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CSMD3Q7Z407 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
CSMD3Q7Z407 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
CSMD3Q7Z407 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.15□□□□□ -2.07
CSMD3Q7Z407 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CSMD3Q7Z407 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC2.15□□□□□ -2.07
CSMD3Q7Z407 AC002075.2-201ENST00000425207 252 ntBASIC2.15□□□□□ -2.07
CSMD3Q7Z407 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.15□□□□□ -2.07
CSMD3Q7Z407 AC112653.1-201ENST00000443851 386 ntBASIC2.15□□□□□ -2.07
CSMD3Q7Z407 RPS3P1-201ENST00000456781 192 ntBASIC2.15□□□□□ -2.07
CSMD3Q7Z407 AC099560.2-201ENST00000457554 255 ntBASIC2.15□□□□□ -2.07
CSMD3Q7Z407 HSPE1P6-201ENST00000479457 291 ntBASIC2.15□□□□□ -2.07
CSMD3Q7Z407 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.15□□□□□ -2.07
CSMD3Q7Z407 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC2.15□□□□□ -2.07
CSMD3Q7Z407 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.15□□□□□ -2.07
CSMD3Q7Z407 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.15□□□□□ -2.07
CSMD3Q7Z407 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
CSMD3Q7Z407 AC046144.1-201ENST00000478559 1853 ntBASIC2.15□□□□□ -2.07
CSMD3Q7Z407 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
CSMD3Q7Z407 AC011266.1-201ENST00000624119 3569 ntBASIC2.14□□□□□ -2.07
CSMD3Q7Z407 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
CSMD3Q7Z407 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC2.14□□□□□ -2.07
CSMD3Q7Z407 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CSMD3Q7Z407 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CSMD3Q7Z407 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CSMD3Q7Z407 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CSMD3Q7Z407 SNORD15B-201ENST00000384714 146 ntBASIC2.14□□□□□ -2.07
CSMD3Q7Z407 MIR1289-2-201ENST00000408360 111 ntBASIC2.14□□□□□ -2.07
CSMD3Q7Z407 SKP1P1-201ENST00000438081 489 ntBASIC2.14□□□□□ -2.07
CSMD3Q7Z407 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.14□□□□□ -2.07
CSMD3Q7Z407 RNF148-202ENST00000447240 839 ntTSL 2 BASIC2.14□□□□□ -2.07
CSMD3Q7Z407 AC012123.2-201ENST00000485809 248 ntBASIC2.14□□□□□ -2.07
CSMD3Q7Z407 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.14□□□□□ -2.07
CSMD3Q7Z407 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.14□□□□□ -2.07
CSMD3Q7Z407 AC106785.3-201ENST00000564064 847 ntBASIC2.14□□□□□ -2.07
CSMD3Q7Z407 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC2.14□□□□□ -2.07
CSMD3Q7Z407 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
CSMD3Q7Z407 AL512643.1-201ENST00000635735 524 ntBASIC2.14□□□□□ -2.07
CSMD3Q7Z407 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
CSMD3Q7Z407 AL022311.1-201ENST00000623726 19416 ntBASIC2.14□□□□□ -2.07
CSMD3Q7Z407 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC2.14□□□□□ -2.07
CSMD3Q7Z407 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC2.14□□□□□ -2.07
CSMD3Q7Z407 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CSMD3Q7Z407 ASNSP1-201ENST00000518311 1939 ntBASIC2.14□□□□□ -2.07
CSMD3Q7Z407 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
CSMD3Q7Z407 CD2-201ENST00000369477 478 ntTSL 2 BASIC2.14□□□□□ -2.07
CSMD3Q7Z407 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.14□□□□□ -2.07
CSMD3Q7Z407 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.14□□□□□ -2.07
CSMD3Q7Z407 AP000936.2-201ENST00000447151 681 ntBASIC2.14□□□□□ -2.07
CSMD3Q7Z407 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC2.14□□□□□ -2.07
CSMD3Q7Z407 IGKV3-31-201ENST00000523109 329 ntBASIC2.14□□□□□ -2.07
CSMD3Q7Z407 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC2.14□□□□□ -2.07
CSMD3Q7Z407 AL359535.1-201ENST00000612100 1087 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms