Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.61□□□□□ -1.83
NIPAL3Q6P499 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
NIPAL3Q6P499 RNA5SP130-201ENST00000364431 114 ntBASIC3.61□□□□□ -1.83
NIPAL3Q6P499 AC068538.1-201ENST00000376856 336 ntBASIC3.61□□□□□ -1.83
NIPAL3Q6P499 RNU6-1226P-201ENST00000384317 107 ntBASIC3.61□□□□□ -1.83
NIPAL3Q6P499 RNU6-441P-201ENST00000384545 106 ntBASIC3.61□□□□□ -1.83
NIPAL3Q6P499 MIR3074-201ENST00000384885 81 ntBASIC3.61□□□□□ -1.83
NIPAL3Q6P499 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NIPAL3Q6P499 AL022722.2-201ENST00000402519 180 ntBASIC3.61□□□□□ -1.83
NIPAL3Q6P499 HMGB3P19-201ENST00000403971 560 ntBASIC3.61□□□□□ -1.83
NIPAL3Q6P499 IFNNP1-201ENST00000429219 553 ntBASIC3.61□□□□□ -1.83
NIPAL3Q6P499 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.61□□□□□ -1.83
NIPAL3Q6P499 AL138799.3-201ENST00000438968 350 ntBASIC3.61□□□□□ -1.83
NIPAL3Q6P499 AC114755.5-201ENST00000447760 831 ntBASIC3.61□□□□□ -1.83
NIPAL3Q6P499 AL500522.2-201ENST00000448562 343 ntBASIC3.61□□□□□ -1.83
NIPAL3Q6P499 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.61□□□□□ -1.83
NIPAL3Q6P499 RPS7P7-201ENST00000463499 571 ntBASIC3.61□□□□□ -1.83
NIPAL3Q6P499 RN7SL385P-201ENST00000468873 276 ntBASIC3.61□□□□□ -1.83
NIPAL3Q6P499 AC092045.1-201ENST00000495716 1231 ntBASIC3.61□□□□□ -1.83
NIPAL3Q6P499 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.61□□□□□ -1.83
NIPAL3Q6P499 AC078918.1-201ENST00000498515 228 ntBASIC3.61□□□□□ -1.83
NIPAL3Q6P499 AC104057.1-201ENST00000515547 497 ntBASIC3.61□□□□□ -1.83
NIPAL3Q6P499 RNU2-58P-201ENST00000516403 183 ntBASIC3.61□□□□□ -1.83
NIPAL3Q6P499 RNU6-467P-201ENST00000517027 110 ntBASIC3.61□□□□□ -1.83
NIPAL3Q6P499 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.61□□□□□ -1.83
NIPAL3Q6P499 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.61□□□□□ -1.83
NIPAL3Q6P499 AP004242.1-201ENST00000533701 349 ntBASIC3.61□□□□□ -1.83
NIPAL3Q6P499 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.61□□□□□ -1.83
NIPAL3Q6P499 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.61□□□□□ -1.83
NIPAL3Q6P499 PARP1P2-201ENST00000556806 195 ntBASIC3.61□□□□□ -1.83
NIPAL3Q6P499 AC074051.3-201ENST00000570238 358 ntBASIC3.61□□□□□ -1.83
NIPAL3Q6P499 AC090616.5-202ENST00000582111 297 ntBASIC3.61□□□□□ -1.83
NIPAL3Q6P499 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.61□□□□□ -1.83
NIPAL3Q6P499 AC010928.3-201ENST00000587712 541 ntBASIC3.61□□□□□ -1.83
NIPAL3Q6P499 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.61□□□□□ -1.83
NIPAL3Q6P499 AL591034.3-201ENST00000605511 685 ntBASIC3.61□□□□□ -1.83
NIPAL3Q6P499 RNU4-89P-201ENST00000607443 133 ntBASIC3.61□□□□□ -1.83
NIPAL3Q6P499 uc_338.32-201ENST00000615087 172 ntBASIC3.61□□□□□ -1.83
NIPAL3Q6P499 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NIPAL3Q6P499 AL591424.2-201ENST00000617023 128 ntBASIC3.61□□□□□ -1.83
NIPAL3Q6P499 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.61□□□□□ -1.83
NIPAL3Q6P499 AL121594.5-201ENST00000631724 573 ntBASIC3.61□□□□□ -1.83
NIPAL3Q6P499 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.61□□□□□ -1.83
NIPAL3Q6P499 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.61□□□□□ -1.83
NIPAL3Q6P499 AC090337.1-201ENST00000579651 2074 ntBASIC3.61□□□□□ -1.83
NIPAL3Q6P499 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.61□□□□□ -1.83
NIPAL3Q6P499 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NIPAL3Q6P499 NCAPGP1-201ENST00000505112 1814 ntBASIC3.6□□□□□ -1.83
NIPAL3Q6P499 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
NIPAL3Q6P499 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.6□□□□□ -1.83
NIPAL3Q6P499 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NIPAL3Q6P499 RNU6-353P-201ENST00000364266 108 ntBASIC3.6□□□□□ -1.83
NIPAL3Q6P499 SNORA70.2-201ENST00000364506 135 ntBASIC3.6□□□□□ -1.83
NIPAL3Q6P499 SFR1P1-201ENST00000403720 688 ntBASIC3.6□□□□□ -1.83
NIPAL3Q6P499 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.6□□□□□ -1.83
NIPAL3Q6P499 TPT1P2-201ENST00000413105 503 ntBASIC3.6□□□□□ -1.83
NIPAL3Q6P499 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.6□□□□□ -1.83
NIPAL3Q6P499 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.6□□□□□ -1.83
NIPAL3Q6P499 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.6□□□□□ -1.83
NIPAL3Q6P499 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.6□□□□□ -1.83
NIPAL3Q6P499 AL592437.1-201ENST00000443781 492 ntBASIC3.6□□□□□ -1.83
NIPAL3Q6P499 Z99714.1-201ENST00000450463 807 ntBASIC3.6□□□□□ -1.83
NIPAL3Q6P499 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.6□□□□□ -1.83
NIPAL3Q6P499 NCOR1P1-202ENST00000486162 291 ntBASIC3.6□□□□□ -1.83
NIPAL3Q6P499 RPL7P24-201ENST00000493052 752 ntBASIC3.6□□□□□ -1.83
NIPAL3Q6P499 AC020593.1-201ENST00000507399 299 ntBASIC3.6□□□□□ -1.83
NIPAL3Q6P499 AC023141.12-201ENST00000512399 199 ntBASIC3.6□□□□□ -1.83
NIPAL3Q6P499 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.6□□□□□ -1.83
NIPAL3Q6P499 MTCO1P30-201ENST00000515244 580 ntBASIC3.6□□□□□ -1.83
NIPAL3Q6P499 NARSP2-201ENST00000518524 679 ntBASIC3.6□□□□□ -1.83
NIPAL3Q6P499 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.6□□□□□ -1.83
NIPAL3Q6P499 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.6□□□□□ -1.83
NIPAL3Q6P499 AP001207.1-201ENST00000524051 481 ntBASIC3.6□□□□□ -1.83
NIPAL3Q6P499 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.6□□□□□ -1.83
NIPAL3Q6P499 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.6□□□□□ -1.83
NIPAL3Q6P499 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.6□□□□□ -1.83
NIPAL3Q6P499 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.6□□□□□ -1.83
NIPAL3Q6P499 AC006518.2-201ENST00000542513 940 ntBASIC3.6□□□□□ -1.83
NIPAL3Q6P499 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.6□□□□□ -1.83
NIPAL3Q6P499 AC092470.1-201ENST00000546187 132 ntBASIC3.6□□□□□ -1.83
NIPAL3Q6P499 CR383656.14-201ENST00000551951 406 ntBASIC3.6□□□□□ -1.83
NIPAL3Q6P499 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.6□□□□□ -1.83
NIPAL3Q6P499 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.6□□□□□ -1.83
NIPAL3Q6P499 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.6□□□□□ -1.83
NIPAL3Q6P499 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.6□□□□□ -1.83
NIPAL3Q6P499 AL390816.3-201ENST00000604527 1066 ntBASIC3.6□□□□□ -1.83
NIPAL3Q6P499 AC018754.1-201ENST00000607486 925 ntBASIC3.6□□□□□ -1.83
NIPAL3Q6P499 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
NIPAL3Q6P499 AC068880.4-201ENST00000623082 495 ntBASIC3.6□□□□□ -1.83
NIPAL3Q6P499 AC124312.6-202ENST00000623624 418 ntBASIC3.6□□□□□ -1.83
NIPAL3Q6P499 AC112484.5-201ENST00000624189 228 ntBASIC3.6□□□□□ -1.83
NIPAL3Q6P499 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.6□□□□□ -1.83
NIPAL3Q6P499 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
NIPAL3Q6P499 AL355578.1-201ENST00000607405 1328 ntBASIC3.6□□□□□ -1.83
NIPAL3Q6P499 MTND5P31-201ENST00000419366 1374 ntBASIC3.6□□□□□ -1.83
NIPAL3Q6P499 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
NIPAL3Q6P499 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.6□□□□□ -1.83
NIPAL3Q6P499 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
NIPAL3Q6P499 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NIPAL3Q6P499 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms