Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.23□□□□□ -1.73
GABPAQ06546 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.23□□□□□ -1.73
GABPAQ06546 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
GABPAQ06546 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
GABPAQ06546 AL356489.2-201ENST00000566968 3528 ntBASIC4.23□□□□□ -1.73
GABPAQ06546 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
GABPAQ06546 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.23□□□□□ -1.73
GABPAQ06546 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
GABPAQ06546 AC008432.1-201ENST00000615912 1320 ntBASIC4.22□□□□□ -1.73
GABPAQ06546 MTCO1P18-201ENST00000455518 1419 ntBASIC4.22□□□□□ -1.73
GABPAQ06546 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.22□□□□□ -1.73
GABPAQ06546 AC011155.1-201ENST00000316512 456 ntBASIC4.22□□□□□ -1.73
GABPAQ06546 RNU1-33P-201ENST00000364249 162 ntBASIC4.22□□□□□ -1.73
GABPAQ06546 HSPD1P16-201ENST00000402302 394 ntBASIC4.22□□□□□ -1.73
GABPAQ06546 MIR1303-201ENST00000408625 86 ntBASIC4.22□□□□□ -1.73
GABPAQ06546 AL391219.1-201ENST00000422570 483 ntBASIC4.22□□□□□ -1.73
GABPAQ06546 NANOGP6-201ENST00000429190 847 ntBASIC4.22□□□□□ -1.73
GABPAQ06546 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.22□□□□□ -1.73
GABPAQ06546 MTCO1P43-201ENST00000431831 488 ntBASIC4.22□□□□□ -1.73
GABPAQ06546 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.22□□□□□ -1.73
GABPAQ06546 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.22□□□□□ -1.73
GABPAQ06546 RPS20P1-201ENST00000434853 354 ntBASIC4.22□□□□□ -1.73
GABPAQ06546 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.22□□□□□ -1.73
GABPAQ06546 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
GABPAQ06546 AL162388.1-201ENST00000450912 352 ntBASIC4.22□□□□□ -1.73
GABPAQ06546 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.22□□□□□ -1.73
GABPAQ06546 U3.44-201ENST00000458938 192 ntBASIC4.22□□□□□ -1.73
GABPAQ06546 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.22□□□□□ -1.73
GABPAQ06546 FTH1P24-201ENST00000503502 462 ntBASIC4.22□□□□□ -1.73
GABPAQ06546 AC004069.2-201ENST00000505438 1114 ntBASIC4.22□□□□□ -1.73
GABPAQ06546 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.22□□□□□ -1.73
GABPAQ06546 AC026784.1-201ENST00000507986 352 ntBASIC4.22□□□□□ -1.73
GABPAQ06546 IGKV2-36-201ENST00000519999 223 ntBASIC4.22□□□□□ -1.73
GABPAQ06546 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.22□□□□□ -1.73
GABPAQ06546 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.22□□□□□ -1.73
GABPAQ06546 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.22□□□□□ -1.73
GABPAQ06546 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
GABPAQ06546 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.22□□□□□ -1.73
GABPAQ06546 TRAV15-201ENST00000556680 249 ntBASIC4.22□□□□□ -1.73
GABPAQ06546 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.22□□□□□ -1.73
GABPAQ06546 AC090079.2-201ENST00000575289 768 ntBASIC4.22□□□□□ -1.73
GABPAQ06546 AC245100.7-201ENST00000609678 442 ntBASIC4.22□□□□□ -1.73
GABPAQ06546 AC096577.2-201ENST00000611455 153 ntBASIC4.22□□□□□ -1.73
GABPAQ06546 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
GABPAQ06546 AL356274.2-201ENST00000624379 3752 ntBASIC4.22□□□□□ -1.73
GABPAQ06546 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
GABPAQ06546 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
GABPAQ06546 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
GABPAQ06546 RNA5SP72-201ENST00000364442 117 ntBASIC4.21□□□□□ -1.74
GABPAQ06546 RNU6-481P-201ENST00000384194 107 ntBASIC4.21□□□□□ -1.74
GABPAQ06546 SNORA9-201ENST00000384215 133 ntBASIC4.21□□□□□ -1.74
GABPAQ06546 AC008173.1-201ENST00000418901 264 ntBASIC4.21□□□□□ -1.74
GABPAQ06546 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.21□□□□□ -1.74
GABPAQ06546 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC4.21□□□□□ -1.74
GABPAQ06546 RPL12P46-201ENST00000436610 195 ntBASIC4.21□□□□□ -1.74
GABPAQ06546 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.21□□□□□ -1.74
GABPAQ06546 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
GABPAQ06546 SETP14-201ENST00000497538 873 ntBASIC4.21□□□□□ -1.74
GABPAQ06546 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
GABPAQ06546 HSPD1P15-201ENST00000505573 1122 ntBASIC4.21□□□□□ -1.74
GABPAQ06546 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
GABPAQ06546 BTF3L4P4-201ENST00000506381 449 ntBASIC4.21□□□□□ -1.74
GABPAQ06546 AC074250.1-201ENST00000511117 192 ntBASIC4.21□□□□□ -1.74
GABPAQ06546 AC010285.3-201ENST00000511668 676 ntBASIC4.21□□□□□ -1.74
GABPAQ06546 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.21□□□□□ -1.74
GABPAQ06546 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.21□□□□□ -1.74
GABPAQ06546 SMARCE1P4-201ENST00000523647 241 ntBASIC4.21□□□□□ -1.74
GABPAQ06546 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.21□□□□□ -1.74
GABPAQ06546 AC092747.2-201ENST00000545069 983 ntBASIC4.21□□□□□ -1.74
GABPAQ06546 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC4.21□□□□□ -1.74
GABPAQ06546 AC115085.1-201ENST00000588924 229 ntBASIC4.21□□□□□ -1.74
GABPAQ06546 EIF1P6-201ENST00000600054 334 ntBASIC4.21□□□□□ -1.74
GABPAQ06546 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.21□□□□□ -1.74
GABPAQ06546 ELOCP35-201ENST00000604289 336 ntBASIC4.21□□□□□ -1.74
GABPAQ06546 AC120053.1-201ENST00000607706 736 ntBASIC4.21□□□□□ -1.74
GABPAQ06546 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.21□□□□□ -1.74
GABPAQ06546 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.21□□□□□ -1.74
GABPAQ06546 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.21□□□□□ -1.74
GABPAQ06546 AC080188.3-201ENST00000624842 748 ntBASIC4.21□□□□□ -1.74
GABPAQ06546 MTND4P26-201ENST00000415971 1359 ntBASIC4.21□□□□□ -1.74
GABPAQ06546 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
GABPAQ06546 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
GABPAQ06546 MTCO1P4-201ENST00000520516 1409 ntBASIC4.21□□□□□ -1.74
GABPAQ06546 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
GABPAQ06546 AC007656.2-201ENST00000624902 4547 ntBASIC4.2□□□□□ -1.74
GABPAQ06546 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.2□□□□□ -1.74
GABPAQ06546 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
GABPAQ06546 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
GABPAQ06546 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
GABPAQ06546 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
GABPAQ06546 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
GABPAQ06546 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
GABPAQ06546 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
GABPAQ06546 RNA5SP27-201ENST00000363839 119 ntBASIC4.2□□□□□ -1.74
GABPAQ06546 RNU6-761P-201ENST00000384148 107 ntBASIC4.2□□□□□ -1.74
GABPAQ06546 RNU6-146P-201ENST00000384602 108 ntBASIC4.2□□□□□ -1.74
GABPAQ06546 SNORD17-201ENST00000390930 237 ntBASIC4.2□□□□□ -1.74
GABPAQ06546 SNORA11.1-201ENST00000408133 129 ntBASIC4.2□□□□□ -1.74
GABPAQ06546 ETF1P3-201ENST00000430422 1160 ntBASIC4.2□□□□□ -1.74
GABPAQ06546 AC239809.1-201ENST00000450470 217 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms