Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 AC004832.5-201ENST00000608677 401 ntBASIC2.57□□□□□ -2
SSBP1Q04837 AL020991.1-201ENST00000612314 373 ntBASIC2.57□□□□□ -2
SSBP1Q04837 AC009464.1-201ENST00000615731 469 ntBASIC2.57□□□□□ -2
SSBP1Q04837 AC243312.2-201ENST00000623340 601 ntBASIC2.57□□□□□ -2
SSBP1Q04837 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.57□□□□□ -2
SSBP1Q04837 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC2.57□□□□□ -2
SSBP1Q04837 AC009093.8-201ENST00000641769 292 ntBASIC2.57□□□□□ -2
SSBP1Q04837 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
SSBP1Q04837 AC091152.2-201ENST00000591628 2569 ntBASIC2.56□□□□□ -2
SSBP1Q04837 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SSBP1Q04837 AC000367.1-201ENST00000452711 1766 ntBASIC2.56□□□□□ -2
SSBP1Q04837 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
SSBP1Q04837 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC2.56□□□□□ -2
SSBP1Q04837 AC004987.3-201ENST00000413879 771 ntBASIC2.56□□□□□ -2
SSBP1Q04837 RAB9AP4-201ENST00000415230 609 ntBASIC2.56□□□□□ -2
SSBP1Q04837 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC2.56□□□□□ -2
SSBP1Q04837 BX842559.1-201ENST00000419615 532 ntBASIC2.56□□□□□ -2
SSBP1Q04837 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC2.56□□□□□ -2
SSBP1Q04837 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.56□□□□□ -2
SSBP1Q04837 TRAPPC2P5-201ENST00000426293 308 ntBASIC2.56□□□□□ -2
SSBP1Q04837 RPL21P110-201ENST00000433345 446 ntBASIC2.56□□□□□ -2
SSBP1Q04837 SETP8-201ENST00000435341 628 ntBASIC2.56□□□□□ -2
SSBP1Q04837 RPL21P23-201ENST00000446654 460 ntBASIC2.56□□□□□ -2
SSBP1Q04837 RPL36AP33-201ENST00000450395 310 ntBASIC2.56□□□□□ -2
SSBP1Q04837 RPS26P21-201ENST00000475397 348 ntBASIC2.56□□□□□ -2
SSBP1Q04837 RPS29P2-201ENST00000479278 136 ntBASIC2.56□□□□□ -2
SSBP1Q04837 AC106707.2-201ENST00000484182 374 ntBASIC2.56□□□□□ -2
SSBP1Q04837 AP001086.1-201ENST00000494882 321 ntBASIC2.56□□□□□ -2
SSBP1Q04837 AC110794.1-201ENST00000505816 425 ntBASIC2.56□□□□□ -2
SSBP1Q04837 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC2.56□□□□□ -2
SSBP1Q04837 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC2.56□□□□□ -2
SSBP1Q04837 MTND2P17-201ENST00000550281 688 ntBASIC2.56□□□□□ -2
SSBP1Q04837 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC2.56□□□□□ -2
SSBP1Q04837 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.56□□□□□ -2
SSBP1Q04837 AC084757.1-201ENST00000559987 490 ntBASIC2.56□□□□□ -2
SSBP1Q04837 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.56□□□□□ -2
SSBP1Q04837 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC2.56□□□□□ -2
SSBP1Q04837 AC005951.1-201ENST00000576706 485 ntBASIC2.56□□□□□ -2
SSBP1Q04837 SNORD39.2-201ENST00000579995 76 ntBASIC2.56□□□□□ -2
SSBP1Q04837 NF1P5-201ENST00000588287 448 ntBASIC2.56□□□□□ -2
SSBP1Q04837 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.56□□□□□ -2
SSBP1Q04837 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.56□□□□□ -2
SSBP1Q04837 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
SSBP1Q04837 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC2.56□□□□□ -2
SSBP1Q04837 AC114546.3-201ENST00000623582 1734 ntBASIC2.56□□□□□ -2
SSBP1Q04837 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC2.56□□□□□ -2
SSBP1Q04837 Z82195.2-201ENST00000612348 18351 ntBASIC2.56□□□□□ -2
SSBP1Q04837 PHKBP1-201ENST00000450951 1951 ntBASIC2.56□□□□□ -2
SSBP1Q04837 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.56□□□□□ -2
SSBP1Q04837 FAM35BP-202ENST00000497389 3337 ntBASIC2.55□□□□□ -2
SSBP1Q04837 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
SSBP1Q04837 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
SSBP1Q04837 RPL9P7-201ENST00000330965 580 ntBASIC2.55□□□□□ -2
SSBP1Q04837 AC073325.2-201ENST00000339545 159 ntBASIC2.55□□□□□ -2
SSBP1Q04837 AC234772.1-201ENST00000377927 937 ntBASIC2.55□□□□□ -2
SSBP1Q04837 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.55□□□□□ -2
SSBP1Q04837 AL359837.1-201ENST00000381357 287 ntBASIC2.55□□□□□ -2
SSBP1Q04837 MIR592-201ENST00000384959 97 ntBASIC2.55□□□□□ -2
SSBP1Q04837 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.55□□□□□ -2
SSBP1Q04837 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SSBP1Q04837 AL589994.1-201ENST00000404962 340 ntBASIC2.55□□□□□ -2
SSBP1Q04837 RN7SKP159-201ENST00000410657 292 ntBASIC2.55□□□□□ -2
SSBP1Q04837 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC2.55□□□□□ -2
SSBP1Q04837 AL139281.1-201ENST00000422120 335 ntBASIC2.55□□□□□ -2
SSBP1Q04837 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC2.55□□□□□ -2
SSBP1Q04837 AL445528.1-201ENST00000426330 420 ntBASIC2.55□□□□□ -2
SSBP1Q04837 SAR1AP4-201ENST00000429225 591 ntBASIC2.55□□□□□ -2
SSBP1Q04837 MTND2P2-201ENST00000434633 945 ntBASIC2.55□□□□□ -2
SSBP1Q04837 RPL7P59-201ENST00000447700 943 ntBASIC2.55□□□□□ -2
SSBP1Q04837 TPT1P12-201ENST00000448968 492 ntBASIC2.55□□□□□ -2
SSBP1Q04837 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.55□□□□□ -2
SSBP1Q04837 RN7SL297P-201ENST00000483161 293 ntBASIC2.55□□□□□ -2
SSBP1Q04837 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC2.55□□□□□ -2
SSBP1Q04837 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.55□□□□□ -2
SSBP1Q04837 SNORA9.3-201ENST00000516383 129 ntBASIC2.55□□□□□ -2
SSBP1Q04837 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC2.55□□□□□ -2
SSBP1Q04837 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC2.55□□□□□ -2
SSBP1Q04837 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC2.55□□□□□ -2
SSBP1Q04837 AC034268.2-201ENST00000571784 482 ntBASIC2.55□□□□□ -2
SSBP1Q04837 AC123786.2-201ENST00000603459 275 ntBASIC2.55□□□□□ -2
SSBP1Q04837 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.55□□□□□ -2
SSBP1Q04837 AC010200.2-201ENST00000605098 235 ntBASIC2.55□□□□□ -2
SSBP1Q04837 SNORA51-201ENST00000606420 132 ntBASIC2.55□□□□□ -2
SSBP1Q04837 AL355578.1-201ENST00000607405 1328 ntBASIC2.55□□□□□ -2
SSBP1Q04837 AC099669.2-201ENST00000616549 437 ntBASIC2.55□□□□□ -2
SSBP1Q04837 ZYXP1-201ENST00000617638 118 ntBASIC2.55□□□□□ -2
SSBP1Q04837 AC138932.5-201ENST00000617759 563 ntBASIC2.55□□□□□ -2
SSBP1Q04837 MIR6730-201ENST00000622213 67 ntBASIC2.55□□□□□ -2
SSBP1Q04837 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.55□□□□□ -2
SSBP1Q04837 AC244258.1-201ENST00000637553 1071 ntBASIC2.55□□□□□ -2
SSBP1Q04837 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.55□□□□□ -2
SSBP1Q04837 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SSBP1Q04837 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.55□□□□□ -2
SSBP1Q04837 AL353746.1-201ENST00000566293 6881 ntBASIC2.55□□□□□ -2
SSBP1Q04837 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC2.55□□□□□ -2
SSBP1Q04837 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SSBP1Q04837 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC2.54□□□□□ -2
SSBP1Q04837 ASNSP3-201ENST00000451989 1306 ntBASIC2.54□□□□□ -2
SSBP1Q04837 RNU1-35P-201ENST00000362782 153 ntBASIC2.54□□□□□ -2
SSBP1Q04837 SNORA7.4-201ENST00000384249 137 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms