Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 RNF148-202ENST00000447240 839 ntTSL 2 BASIC2.22□□□□□ -2.05
PRKDCP78527 AC112492.1-201ENST00000449607 712 ntBASIC2.22□□□□□ -2.05
PRKDCP78527 HMGB3P22-202ENST00000451823 572 ntBASIC2.22□□□□□ -2.05
PRKDCP78527 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC2.22□□□□□ -2.05
PRKDCP78527 AC006518.1-201ENST00000541449 943 ntBASIC2.22□□□□□ -2.05
PRKDCP78527 SERPINE4P-201ENST00000554978 281 ntBASIC2.22□□□□□ -2.05
PRKDCP78527 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC2.22□□□□□ -2.05
PRKDCP78527 AC096947.1-201ENST00000603233 470 ntBASIC2.22□□□□□ -2.05
PRKDCP78527 MIR6817-201ENST00000615588 66 ntBASIC2.22□□□□□ -2.05
PRKDCP78527 AC022149.2-201ENST00000621061 203 ntBASIC2.22□□□□□ -2.05
PRKDCP78527 AC026634.1-201ENST00000634369 198 ntBASIC2.22□□□□□ -2.05
PRKDCP78527 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
PRKDCP78527 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
PRKDCP78527 Z82217.1-201ENST00000625157 8149 ntBASIC2.22□□□□□ -2.05
PRKDCP78527 AL513302.2-201ENST00000562313 1842 ntBASIC2.22□□□□□ -2.05
PRKDCP78527 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
PRKDCP78527 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC2.22□□□□□ -2.05
PRKDCP78527 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.22□□□□□ -2.05
PRKDCP78527 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
PRKDCP78527 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
PRKDCP78527 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
PRKDCP78527 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC2.22□□□□□ -2.05
PRKDCP78527 FCF1P8-201ENST00000510322 597 ntBASIC2.22□□□□□ -2.05
PRKDCP78527 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.22□□□□□ -2.05
PRKDCP78527 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
PRKDCP78527 BRDTP1-201ENST00000605735 677 ntBASIC2.22□□□□□ -2.05
PRKDCP78527 AC022509.4-201ENST00000621404 572 ntBASIC2.22□□□□□ -2.05
PRKDCP78527 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
PRKDCP78527 AC092079.1-201ENST00000558620 1985 ntBASIC2.22□□□□□ -2.05
PRKDCP78527 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
PRKDCP78527 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC2.22□□□□□ -2.05
PRKDCP78527 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC2.22□□□□□ -2.05
PRKDCP78527 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC2.22□□□□□ -2.05
PRKDCP78527 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
PRKDCP78527 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
PRKDCP78527 MIR448-201ENST00000362131 111 ntBASIC2.22□□□□□ -2.05
PRKDCP78527 U8.2-201ENST00000363156 134 ntBASIC2.22□□□□□ -2.05
PRKDCP78527 Y_RNA.118-201ENST00000363300 101 ntBASIC2.22□□□□□ -2.05
PRKDCP78527 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC2.22□□□□□ -2.05
PRKDCP78527 AC012065.2-201ENST00000421295 375 ntBASIC2.22□□□□□ -2.05
PRKDCP78527 RPL23AP82-202ENST00000427528 469 ntBASIC2.22□□□□□ -2.05
PRKDCP78527 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC2.22□□□□□ -2.05
PRKDCP78527 CENPBD1P1-201ENST00000464061 469 ntBASIC2.22□□□□□ -2.05
PRKDCP78527 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.22□□□□□ -2.05
PRKDCP78527 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC2.22□□□□□ -2.05
PRKDCP78527 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.22□□□□□ -2.05
PRKDCP78527 EIF1P6-201ENST00000600054 334 ntBASIC2.22□□□□□ -2.05
PRKDCP78527 AC026790.2-201ENST00000606282 430 ntBASIC2.22□□□□□ -2.05
PRKDCP78527 MIR622-201ENST00000638396 96 ntBASIC2.22□□□□□ -2.05
PRKDCP78527 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC2.22□□□□□ -2.05
PRKDCP78527 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC2.22□□□□□ -2.05
PRKDCP78527 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
PRKDCP78527 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
PRKDCP78527 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
PRKDCP78527 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
PRKDCP78527 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
PRKDCP78527 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
PRKDCP78527 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
PRKDCP78527 RN7SKP199-201ENST00000410325 305 ntBASIC2.21□□□□□ -2.06
PRKDCP78527 HMGN2P3-201ENST00000433603 273 ntBASIC2.21□□□□□ -2.06
PRKDCP78527 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC2.21□□□□□ -2.06
PRKDCP78527 HMGN2P5-201ENST00000436882 273 ntBASIC2.21□□□□□ -2.06
PRKDCP78527 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC2.21□□□□□ -2.06
PRKDCP78527 RNU6-548P-201ENST00000517083 115 ntBASIC2.21□□□□□ -2.06
PRKDCP78527 AC138627.1-204ENST00000641894 765 ntBASIC2.21□□□□□ -2.06
PRKDCP78527 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC2.21□□□□□ -2.06
PRKDCP78527 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.21□□□□□ -2.06
PRKDCP78527 AC125336.1-201ENST00000508893 2827 ntBASIC2.21□□□□□ -2.06
PRKDCP78527 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
PRKDCP78527 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC2.21□□□□□ -2.06
PRKDCP78527 RNA5SP68-201ENST00000363885 119 ntBASIC2.21□□□□□ -2.06
PRKDCP78527 SNORA71.1-201ENST00000364523 117 ntBASIC2.21□□□□□ -2.06
PRKDCP78527 AL356968.1-201ENST00000416622 474 ntBASIC2.21□□□□□ -2.06
PRKDCP78527 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.21□□□□□ -2.06
PRKDCP78527 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC2.21□□□□□ -2.06
PRKDCP78527 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC2.21□□□□□ -2.06
PRKDCP78527 AL078595.2-201ENST00000605309 1780 ntBASIC2.21□□□□□ -2.06
PRKDCP78527 SNORD74.4-201ENST00000364129 80 ntBASIC2.21□□□□□ -2.06
PRKDCP78527 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
PRKDCP78527 NPM1P39-201ENST00000449818 867 ntBASIC2.21□□□□□ -2.06
PRKDCP78527 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC2.21□□□□□ -2.06
PRKDCP78527 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC2.21□□□□□ -2.06
PRKDCP78527 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC2.21□□□□□ -2.06
PRKDCP78527 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC2.21□□□□□ -2.06
PRKDCP78527 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
PRKDCP78527 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
PRKDCP78527 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
PRKDCP78527 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC2.21□□□□□ -2.06
PRKDCP78527 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
PRKDCP78527 MIR196B-201ENST00000384852 84 ntBASIC2.2□□□□□ -2.06
PRKDCP78527 AL445528.1-201ENST00000426330 420 ntBASIC2.2□□□□□ -2.06
PRKDCP78527 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.2□□□□□ -2.06
PRKDCP78527 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.2□□□□□ -2.06
PRKDCP78527 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
PRKDCP78527 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC2.2□□□□□ -2.06
PRKDCP78527 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
PRKDCP78527 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
PRKDCP78527 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.2□□□□□ -2.06
PRKDCP78527 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
PRKDCP78527 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms