Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 U8.9-201ENST00000365667 134 ntBASIC2.75□□□□□ -1.97
LSM3P62310 HMGB1P10-201ENST00000395823 563 ntBASIC2.75□□□□□ -1.97
LSM3P62310 AL590004.2-201ENST00000404787 371 ntBASIC2.75□□□□□ -1.97
LSM3P62310 RNA5SP129-201ENST00000410276 118 ntBASIC2.75□□□□□ -1.97
LSM3P62310 AL451074.5-201ENST00000415894 435 ntBASIC2.75□□□□□ -1.97
LSM3P62310 RPL18P10-201ENST00000425606 538 ntBASIC2.75□□□□□ -1.97
LSM3P62310 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LSM3P62310 SAR1AP4-201ENST00000429225 591 ntBASIC2.75□□□□□ -1.97
LSM3P62310 UBE2V2P1-201ENST00000434717 398 ntBASIC2.75□□□□□ -1.97
LSM3P62310 AC093716.1-201ENST00000435923 377 ntBASIC2.75□□□□□ -1.97
LSM3P62310 MUPP-201ENST00000438111 566 ntBASIC2.75□□□□□ -1.97
LSM3P62310 AC108734.1-201ENST00000439549 399 ntBASIC2.75□□□□□ -1.97
LSM3P62310 UBE2V2P4-201ENST00000447495 259 ntBASIC2.75□□□□□ -1.97
LSM3P62310 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC2.75□□□□□ -1.97
LSM3P62310 PRDX3P4-201ENST00000470828 747 ntBASIC2.75□□□□□ -1.97
LSM3P62310 AC007686.1-201ENST00000488511 463 ntBASIC2.75□□□□□ -1.97
LSM3P62310 AC005726.1-201ENST00000494679 427 ntBASIC2.75□□□□□ -1.97
LSM3P62310 CDH12P2-201ENST00000504393 298 ntBASIC2.75□□□□□ -1.97
LSM3P62310 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
LSM3P62310 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC2.75□□□□□ -1.97
LSM3P62310 OR5G4P-201ENST00000525251 760 ntBASIC2.75□□□□□ -1.97
LSM3P62310 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.75□□□□□ -1.97
LSM3P62310 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.75□□□□□ -1.97
LSM3P62310 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC2.75□□□□□ -1.97
LSM3P62310 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC2.75□□□□□ -1.97
LSM3P62310 AC020914.6-201ENST00000594327 272 ntBASIC2.75□□□□□ -1.97
LSM3P62310 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.75□□□□□ -1.97
LSM3P62310 AL445423.1-201ENST00000609941 536 ntBASIC2.75□□□□□ -1.97
LSM3P62310 AP003072.4-201ENST00000624580 310 ntBASIC2.75□□□□□ -1.97
LSM3P62310 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC2.75□□□□□ -1.97
LSM3P62310 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.75□□□□□ -1.97
LSM3P62310 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.75□□□□□ -1.97
LSM3P62310 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LSM3P62310 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
LSM3P62310 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
LSM3P62310 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.74□□□□□ -1.97
LSM3P62310 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
LSM3P62310 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC2.74□□□□□ -1.97
LSM3P62310 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.74□□□□□ -1.97
LSM3P62310 AC009965.2-201ENST00000425328 970 ntBASIC2.74□□□□□ -1.97
LSM3P62310 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC2.74□□□□□ -1.97
LSM3P62310 RPL39P40-201ENST00000445481 146 ntBASIC2.74□□□□□ -1.97
LSM3P62310 AC114755.5-201ENST00000447760 831 ntBASIC2.74□□□□□ -1.97
LSM3P62310 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.74□□□□□ -1.97
LSM3P62310 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC2.74□□□□□ -1.97
LSM3P62310 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.74□□□□□ -1.97
LSM3P62310 SNORD105B-201ENST00000458770 79 ntBASIC2.74□□□□□ -1.97
LSM3P62310 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC2.74□□□□□ -1.97
LSM3P62310 RPS27AP9-201ENST00000477681 438 ntBASIC2.74□□□□□ -1.97
LSM3P62310 LARP7P4-201ENST00000481075 878 ntBASIC2.74□□□□□ -1.97
LSM3P62310 RPL9P33-201ENST00000484311 566 ntBASIC2.74□□□□□ -1.97
LSM3P62310 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LSM3P62310 HMGB3P15-201ENST00000507326 574 ntBASIC2.74□□□□□ -1.97
LSM3P62310 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC2.74□□□□□ -1.97
LSM3P62310 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC2.74□□□□□ -1.97
LSM3P62310 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.74□□□□□ -1.97
LSM3P62310 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC2.74□□□□□ -1.97
LSM3P62310 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC2.74□□□□□ -1.97
LSM3P62310 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.74□□□□□ -1.97
LSM3P62310 AL049844.2-201ENST00000604280 628 ntBASIC2.74□□□□□ -1.97
LSM3P62310 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
LSM3P62310 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
LSM3P62310 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
LSM3P62310 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC2.74□□□□□ -1.97
LSM3P62310 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC2.74□□□□□ -1.97
LSM3P62310 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC2.74□□□□□ -1.97
LSM3P62310 AL356317.1-201ENST00000396110 1436 ntBASIC2.74□□□□□ -1.97
LSM3P62310 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.74□□□□□ -1.97
LSM3P62310 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LSM3P62310 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
LSM3P62310 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
LSM3P62310 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
LSM3P62310 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.73□□□□□ -1.97
LSM3P62310 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.73□□□□□ -1.97
LSM3P62310 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
LSM3P62310 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
LSM3P62310 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC2.73□□□□□ -1.97
LSM3P62310 RN7SKP111-201ENST00000410349 271 ntBASIC2.73□□□□□ -1.97
LSM3P62310 RNU2-6P-201ENST00000411404 190 ntBASIC2.73□□□□□ -1.97
LSM3P62310 NEK4P1-201ENST00000433383 879 ntBASIC2.73□□□□□ -1.97
LSM3P62310 MTCO1P52-201ENST00000433928 531 ntBASIC2.73□□□□□ -1.97
LSM3P62310 OR4C10P-201ENST00000434991 931 ntBASIC2.73□□□□□ -1.97
LSM3P62310 RPS29P6-201ENST00000438196 145 ntBASIC2.73□□□□□ -1.97
LSM3P62310 RPS29P7-201ENST00000439662 171 ntBASIC2.73□□□□□ -1.97
LSM3P62310 CALM1P2-201ENST00000452941 448 ntBASIC2.73□□□□□ -1.97
LSM3P62310 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC2.73□□□□□ -1.97
LSM3P62310 ATG10-AS1-201ENST00000504846 648 ntBASIC2.73□□□□□ -1.97
LSM3P62310 GMPSP1-201ENST00000514075 579 ntBASIC2.73□□□□□ -1.97
LSM3P62310 AC103843.2-201ENST00000530523 682 ntBASIC2.73□□□□□ -1.97
LSM3P62310 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.73□□□□□ -1.97
LSM3P62310 RN7SL703P-201ENST00000578485 302 ntBASIC2.73□□□□□ -1.97
LSM3P62310 MIR2682-201ENST00000580305 110 ntBASIC2.73□□□□□ -1.97
LSM3P62310 NPM1P45-201ENST00000583151 559 ntBASIC2.73□□□□□ -1.97
LSM3P62310 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC2.73□□□□□ -1.97
LSM3P62310 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.73□□□□□ -1.97
LSM3P62310 OR2BH1P-201ENST00000608850 864 ntBASIC2.73□□□□□ -1.97
LSM3P62310 AL359198.2-201ENST00000611836 194 ntBASIC2.73□□□□□ -1.97
LSM3P62310 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.73□□□□□ -1.97
LSM3P62310 AK6-205ENST00000618980 483 ntTSL 2 BASIC2.73□□□□□ -1.97
LSM3P62310 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms