Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.55□□□□□ -1.84
LMO4P61968 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
LMO4P61968 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.55□□□□□ -1.84
LMO4P61968 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
LMO4P61968 MAPK10-320ENST00000641462 6696 ntBASIC3.55□□□□□ -1.84
LMO4P61968 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
LMO4P61968 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
LMO4P61968 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
LMO4P61968 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
LMO4P61968 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
LMO4P61968 AL356473.1-201ENST00000406203 1408 ntBASIC3.54□□□□□ -1.84
LMO4P61968 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
LMO4P61968 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
LMO4P61968 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
LMO4P61968 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.54□□□□□ -1.84
LMO4P61968 AC111188.2-201ENST00000529697 1387 ntBASIC3.54□□□□□ -1.84
LMO4P61968 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
LMO4P61968 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
LMO4P61968 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC3.54□□□□□ -1.84
LMO4P61968 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
LMO4P61968 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
LMO4P61968 RNU1-20P-201ENST00000363314 162 ntBASIC3.54□□□□□ -1.84
LMO4P61968 RNU1-44P-201ENST00000384453 163 ntBASIC3.54□□□□□ -1.84
LMO4P61968 ATP5F1P3-201ENST00000397213 657 ntBASIC3.54□□□□□ -1.84
LMO4P61968 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
LMO4P61968 AL078604.1-201ENST00000404609 466 ntBASIC3.54□□□□□ -1.84
LMO4P61968 AL355379.1-201ENST00000405542 640 ntBASIC3.54□□□□□ -1.84
LMO4P61968 AC246680.2-201ENST00000422106 389 ntBASIC3.54□□□□□ -1.84
LMO4P61968 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.54□□□□□ -1.84
LMO4P61968 AC012519.1-201ENST00000424588 610 ntBASIC3.54□□□□□ -1.84
LMO4P61968 AC234781.2-201ENST00000426370 994 ntBASIC3.54□□□□□ -1.84
LMO4P61968 MTND1P32-201ENST00000433043 938 ntBASIC3.54□□□□□ -1.84
LMO4P61968 CEACAMP1-201ENST00000434624 1035 ntBASIC3.54□□□□□ -1.84
LMO4P61968 TMX2P1-201ENST00000436507 708 ntBASIC3.54□□□□□ -1.84
LMO4P61968 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.54□□□□□ -1.84
LMO4P61968 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC3.54□□□□□ -1.84
LMO4P61968 ELOCP8-201ENST00000439309 332 ntBASIC3.54□□□□□ -1.84
LMO4P61968 ELOCP15-201ENST00000442090 332 ntBASIC3.54□□□□□ -1.84
LMO4P61968 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.54□□□□□ -1.84
LMO4P61968 AL360221.1-201ENST00000445989 335 ntBASIC3.54□□□□□ -1.84
LMO4P61968 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.54□□□□□ -1.84
LMO4P61968 HMGB3P21-201ENST00000452483 547 ntBASIC3.54□□□□□ -1.84
LMO4P61968 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC3.54□□□□□ -1.84
LMO4P61968 AL445433.1-201ENST00000457507 257 ntBASIC3.54□□□□□ -1.84
LMO4P61968 AC108022.1-201ENST00000493466 478 ntBASIC3.54□□□□□ -1.84
LMO4P61968 NDUFB4P12-201ENST00000513465 390 ntBASIC3.54□□□□□ -1.84
LMO4P61968 RN7SKP283-201ENST00000517197 270 ntBASIC3.54□□□□□ -1.84
LMO4P61968 RAD21-204ENST00000518055 896 ntTSL 2 BASIC3.54□□□□□ -1.84
LMO4P61968 RPL12P22-201ENST00000519073 490 ntBASIC3.54□□□□□ -1.84
LMO4P61968 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.54□□□□□ -1.84
LMO4P61968 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.54□□□□□ -1.84
LMO4P61968 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.54□□□□□ -1.84
LMO4P61968 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.54□□□□□ -1.84
LMO4P61968 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.54□□□□□ -1.84
LMO4P61968 MIR4472-2-201ENST00000582069 67 ntBASIC3.54□□□□□ -1.84
LMO4P61968 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.54□□□□□ -1.84
LMO4P61968 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.54□□□□□ -1.84
LMO4P61968 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.54□□□□□ -1.84
LMO4P61968 AL163642.2-201ENST00000604722 1019 ntBASIC3.54□□□□□ -1.84
LMO4P61968 AC103591.3-201ENST00000608684 209 ntBASIC3.54□□□□□ -1.84
LMO4P61968 AC104073.3-201ENST00000610942 955 ntBASIC3.54□□□□□ -1.84
LMO4P61968 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
LMO4P61968 SNX18P1Y-201ENST00000616231 511 ntBASIC3.54□□□□□ -1.84
LMO4P61968 AC131238.1-201ENST00000617135 328 ntBASIC3.54□□□□□ -1.84
LMO4P61968 AC023509.5-201ENST00000617434 807 ntBASIC3.54□□□□□ -1.84
LMO4P61968 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.54□□□□□ -1.84
LMO4P61968 AC091931.1-201ENST00000623488 728 ntBASIC3.54□□□□□ -1.84
LMO4P61968 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC3.54□□□□□ -1.84
LMO4P61968 AL672167.1-203ENST00000641299 2975 ntBASIC3.54□□□□□ -1.84
LMO4P61968 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
LMO4P61968 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.54□□□□□ -1.84
LMO4P61968 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC3.54□□□□□ -1.84
LMO4P61968 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
LMO4P61968 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
LMO4P61968 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC3.54□□□□□ -1.84
LMO4P61968 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
LMO4P61968 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
LMO4P61968 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
LMO4P61968 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC3.54□□□□□ -1.84
LMO4P61968 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
LMO4P61968 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.54□□□□□ -1.84
LMO4P61968 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC3.54□□□□□ -1.84
LMO4P61968 AL390237.1-201ENST00000404226 1415 ntBASIC3.53□□□□□ -1.84
LMO4P61968 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LMO4P61968 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.53□□□□□ -1.84
LMO4P61968 AC093591.2-201ENST00000565254 3843 ntBASIC3.53□□□□□ -1.84
LMO4P61968 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
LMO4P61968 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
LMO4P61968 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.53□□□□□ -1.84
LMO4P61968 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LMO4P61968 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
LMO4P61968 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LMO4P61968 AL049555.1-201ENST00000562834 1933 ntBASIC3.53□□□□□ -1.84
LMO4P61968 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
LMO4P61968 RNU6-543P-201ENST00000362576 108 ntBASIC3.53□□□□□ -1.84
LMO4P61968 RNU6-1339P-201ENST00000363574 91 ntBASIC3.53□□□□□ -1.84
LMO4P61968 RNU6-553P-201ENST00000364047 96 ntBASIC3.53□□□□□ -1.84
LMO4P61968 RNU6-413P-201ENST00000384115 107 ntBASIC3.53□□□□□ -1.84
LMO4P61968 SNORA40.2-201ENST00000390847 128 ntBASIC3.53□□□□□ -1.84
LMO4P61968 PPIAP31-201ENST00000405422 495 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms