Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 MIR1250-201ENST00000408098 113 ntBASIC3.39□□□□□ -1.87
CLDN18P56856 AC009237.5-201ENST00000414271 501 ntBASIC3.39□□□□□ -1.87
CLDN18P56856 SNORA71B-202ENST00000439232 272 ntBASIC3.39□□□□□ -1.87
CLDN18P56856 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.39□□□□□ -1.87
CLDN18P56856 RPL23AP15-201ENST00000450202 459 ntBASIC3.39□□□□□ -1.87
CLDN18P56856 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.39□□□□□ -1.87
CLDN18P56856 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.39□□□□□ -1.87
CLDN18P56856 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.39□□□□□ -1.87
CLDN18P56856 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.39□□□□□ -1.87
CLDN18P56856 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CLDN18P56856 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.39□□□□□ -1.87
CLDN18P56856 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.39□□□□□ -1.87
CLDN18P56856 HIGD1AP3-201ENST00000515857 278 ntBASIC3.39□□□□□ -1.87
CLDN18P56856 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.39□□□□□ -1.87
CLDN18P56856 PAICSP4-201ENST00000517543 1253 ntBASIC3.39□□□□□ -1.87
CLDN18P56856 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.39□□□□□ -1.87
CLDN18P56856 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CLDN18P56856 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.39□□□□□ -1.87
CLDN18P56856 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.39□□□□□ -1.87
CLDN18P56856 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.39□□□□□ -1.87
CLDN18P56856 AC005972.3-201ENST00000606304 481 ntBASIC3.39□□□□□ -1.87
CLDN18P56856 RNU1-30P-201ENST00000606575 163 ntBASIC3.39□□□□□ -1.87
CLDN18P56856 AC011374.2-201ENST00000607135 526 ntBASIC3.39□□□□□ -1.87
CLDN18P56856 AC079684.1-201ENST00000621405 437 ntBASIC3.39□□□□□ -1.87
CLDN18P56856 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.39□□□□□ -1.87
CLDN18P56856 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.39□□□□□ -1.87
CLDN18P56856 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.39□□□□□ -1.87
CLDN18P56856 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLDN18P56856 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLDN18P56856 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLDN18P56856 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
CLDN18P56856 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.39□□□□□ -1.87
CLDN18P56856 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLDN18P56856 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLDN18P56856 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLDN18P56856 AC016716.1-201ENST00000265882 708 ntBASIC3.38□□□□□ -1.87
CLDN18P56856 RNU6-600P-201ENST00000362524 99 ntBASIC3.38□□□□□ -1.87
CLDN18P56856 RNU1-85P-201ENST00000364127 164 ntBASIC3.38□□□□□ -1.87
CLDN18P56856 RNU1-89P-201ENST00000384592 164 ntBASIC3.38□□□□□ -1.87
CLDN18P56856 AC007066.1-201ENST00000392902 381 ntBASIC3.38□□□□□ -1.87
CLDN18P56856 SOD2P1-201ENST00000396543 562 ntBASIC3.38□□□□□ -1.87
CLDN18P56856 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN18P56856 MTND2P16-201ENST00000419987 799 ntBASIC3.38□□□□□ -1.87
CLDN18P56856 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN18P56856 HMGB1P45-201ENST00000435986 653 ntBASIC3.38□□□□□ -1.87
CLDN18P56856 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN18P56856 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.38□□□□□ -1.87
CLDN18P56856 AL513343.1-201ENST00000451818 792 ntBASIC3.38□□□□□ -1.87
CLDN18P56856 AC126121.1-201ENST00000482313 553 ntBASIC3.38□□□□□ -1.87
CLDN18P56856 AC073522.1-201ENST00000483312 377 ntBASIC3.38□□□□□ -1.87
CLDN18P56856 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN18P56856 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.38□□□□□ -1.87
CLDN18P56856 RNA5SP208-201ENST00000516156 78 ntBASIC3.38□□□□□ -1.87
CLDN18P56856 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN18P56856 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN18P56856 AC022784.5-201ENST00000522241 437 ntBASIC3.38□□□□□ -1.87
CLDN18P56856 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN18P56856 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.38□□□□□ -1.87
CLDN18P56856 MIR4504-201ENST00000577413 92 ntBASIC3.38□□□□□ -1.87
CLDN18P56856 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.38□□□□□ -1.87
CLDN18P56856 MIR4429-201ENST00000580105 73 ntBASIC3.38□□□□□ -1.87
CLDN18P56856 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.38□□□□□ -1.87
CLDN18P56856 AC090616.5-202ENST00000582111 297 ntBASIC3.38□□□□□ -1.87
CLDN18P56856 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN18P56856 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.38□□□□□ -1.87
CLDN18P56856 AL137849.1-201ENST00000604767 169 ntBASIC3.38□□□□□ -1.87
CLDN18P56856 AL391497.1-201ENST00000608671 547 ntBASIC3.38□□□□□ -1.87
CLDN18P56856 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLDN18P56856 AC005156.1-201ENST00000613371 573 ntBASIC3.38□□□□□ -1.87
CLDN18P56856 U7.8-201ENST00000619968 63 ntBASIC3.38□□□□□ -1.87
CLDN18P56856 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLDN18P56856 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CLDN18P56856 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLDN18P56856 ZNF285B-201ENST00000561698 1767 ntBASIC3.38□□□□□ -1.87
CLDN18P56856 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN18P56856 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN18P56856 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.37□□□□□ -1.87
CLDN18P56856 AL133383.2-201ENST00000622958 2336 ntBASIC3.37□□□□□ -1.87
CLDN18P56856 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
CLDN18P56856 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN18P56856 OTUD4P1-201ENST00000237841 3067 ntBASIC3.37□□□□□ -1.87
CLDN18P56856 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN18P56856 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CLDN18P56856 AC083799.1-201ENST00000366451 910 ntBASIC3.37□□□□□ -1.87
CLDN18P56856 RPL21P17-201ENST00000397467 475 ntBASIC3.37□□□□□ -1.87
CLDN18P56856 HMGB3P18-201ENST00000406327 590 ntBASIC3.37□□□□□ -1.87
CLDN18P56856 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.37□□□□□ -1.87
CLDN18P56856 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN18P56856 ZNF965P-201ENST00000432501 817 ntBASIC3.37□□□□□ -1.87
CLDN18P56856 GOT2P5-201ENST00000433995 546 ntBASIC3.37□□□□□ -1.87
CLDN18P56856 AC092809.1-201ENST00000441469 474 ntBASIC3.37□□□□□ -1.87
CLDN18P56856 AC004865.1-201ENST00000442276 1003 ntBASIC3.37□□□□□ -1.87
CLDN18P56856 XKRY2-201ENST00000442362 1093 ntBASIC3.37□□□□□ -1.87
CLDN18P56856 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.37□□□□□ -1.87
CLDN18P56856 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.37□□□□□ -1.87
CLDN18P56856 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.37□□□□□ -1.87
CLDN18P56856 RPL7P15-201ENST00000461190 712 ntBASIC3.37□□□□□ -1.87
CLDN18P56856 AC078785.3-201ENST00000476607 425 ntBASIC3.37□□□□□ -1.87
CLDN18P56856 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.37□□□□□ -1.87
CLDN18P56856 RNU1-95P-201ENST00000516357 160 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms