Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.94□□□□□ -1.78
CDH11P55287 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.94□□□□□ -1.78
CDH11P55287 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.94□□□□□ -1.78
CDH11P55287 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.94□□□□□ -1.78
CDH11P55287 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.94□□□□□ -1.78
CDH11P55287 NECAP1P2-201ENST00000455668 727 ntBASIC3.94□□□□□ -1.78
CDH11P55287 NF1P3-201ENST00000457709 450 ntBASIC3.94□□□□□ -1.78
CDH11P55287 RPL23AP24-201ENST00000458203 385 ntBASIC3.94□□□□□ -1.78
CDH11P55287 RPL5P24-201ENST00000463742 885 ntBASIC3.94□□□□□ -1.78
CDH11P55287 AC109327.1-201ENST00000471666 403 ntBASIC3.94□□□□□ -1.78
CDH11P55287 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.94□□□□□ -1.78
CDH11P55287 AP000563.1-201ENST00000490865 758 ntBASIC3.94□□□□□ -1.78
CDH11P55287 RPL30P11-201ENST00000495304 339 ntBASIC3.94□□□□□ -1.78
CDH11P55287 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.94□□□□□ -1.78
CDH11P55287 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.94□□□□□ -1.78
CDH11P55287 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.94□□□□□ -1.78
CDH11P55287 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.94□□□□□ -1.78
CDH11P55287 FABP5P12-201ENST00000515543 389 ntBASIC3.94□□□□□ -1.78
CDH11P55287 AC087808.1-201ENST00000520501 361 ntBASIC3.94□□□□□ -1.78
CDH11P55287 AC090819.1-201ENST00000523800 1111 ntBASIC3.94□□□□□ -1.78
CDH11P55287 AP001636.2-201ENST00000525517 696 ntBASIC3.94□□□□□ -1.78
CDH11P55287 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.94□□□□□ -1.78
CDH11P55287 AC135001.1-201ENST00000544546 283 ntBASIC3.94□□□□□ -1.78
CDH11P55287 ZNF321P-202ENST00000550843 495 ntBASIC3.94□□□□□ -1.78
CDH11P55287 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.94□□□□□ -1.78
CDH11P55287 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.94□□□□□ -1.78
CDH11P55287 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
CDH11P55287 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.94□□□□□ -1.78
CDH11P55287 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CDH11P55287 BNIP3P26-201ENST00000600827 554 ntBASIC3.94□□□□□ -1.78
CDH11P55287 AC115286.1-201ENST00000604298 434 ntBASIC3.94□□□□□ -1.78
CDH11P55287 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.94□□□□□ -1.78
CDH11P55287 AC090948.1-201ENST00000607464 549 ntBASIC3.94□□□□□ -1.78
CDH11P55287 AC020634.1-201ENST00000608701 549 ntBASIC3.94□□□□□ -1.78
CDH11P55287 AC012409.3-201ENST00000611343 981 ntBASIC3.94□□□□□ -1.78
CDH11P55287 MLECP1-201ENST00000615893 709 ntBASIC3.94□□□□□ -1.78
CDH11P55287 AP000484.1-201ENST00000620067 1252 ntBASIC3.94□□□□□ -1.78
CDH11P55287 AC022079.1-201ENST00000621546 602 ntBASIC3.94□□□□□ -1.78
CDH11P55287 AC068057.2-201ENST00000624047 895 ntBASIC3.94□□□□□ -1.78
CDH11P55287 AC017037.3-201ENST00000625016 472 ntBASIC3.94□□□□□ -1.78
CDH11P55287 MTND2P41-201ENST00000637599 773 ntBASIC3.94□□□□□ -1.78
CDH11P55287 MIR1322-201ENST00000638013 71 ntBASIC3.94□□□□□ -1.78
CDH11P55287 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDH11P55287 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.94□□□□□ -1.78
CDH11P55287 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDH11P55287 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CDH11P55287 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDH11P55287 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.94□□□□□ -1.78
CDH11P55287 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
CDH11P55287 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.94□□□□□ -1.78
CDH11P55287 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.94□□□□□ -1.78
CDH11P55287 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
CDH11P55287 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
CDH11P55287 AC097504.1-201ENST00000515103 2415 ntBASIC3.93□□□□□ -1.78
CDH11P55287 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CDH11P55287 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.93□□□□□ -1.78
CDH11P55287 AP001486.2-201ENST00000561652 5113 ntBASIC3.93□□□□□ -1.78
CDH11P55287 AC016716.1-201ENST00000265882 708 ntBASIC3.93□□□□□ -1.78
CDH11P55287 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CDH11P55287 FAM3C2-201ENST00000312214 681 ntBASIC3.93□□□□□ -1.78
CDH11P55287 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CDH11P55287 RNA5SP388-201ENST00000362584 119 ntBASIC3.93□□□□□ -1.78
CDH11P55287 RNA5SP509-201ENST00000364577 119 ntBASIC3.93□□□□□ -1.78
CDH11P55287 AL161909.1-201ENST00000397390 712 ntBASIC3.93□□□□□ -1.78
CDH11P55287 RPL31P52-201ENST00000407532 367 ntBASIC3.93□□□□□ -1.78
CDH11P55287 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.93□□□□□ -1.78
CDH11P55287 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CDH11P55287 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.93□□□□□ -1.78
CDH11P55287 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CDH11P55287 RBMY1KP-201ENST00000423480 476 ntBASIC3.93□□□□□ -1.78
CDH11P55287 DPRXP1-201ENST00000426312 460 ntBASIC3.93□□□□□ -1.78
CDH11P55287 AL732292.1-201ENST00000426692 226 ntBASIC3.93□□□□□ -1.78
CDH11P55287 NANOGP6-201ENST00000429190 847 ntBASIC3.93□□□□□ -1.78
CDH11P55287 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.93□□□□□ -1.78
CDH11P55287 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.93□□□□□ -1.78
CDH11P55287 SEPT7P5-201ENST00000434048 306 ntBASIC3.93□□□□□ -1.78
CDH11P55287 AL353597.2-202ENST00000434901 373 ntBASIC3.93□□□□□ -1.78
CDH11P55287 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.93□□□□□ -1.78
CDH11P55287 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.93□□□□□ -1.78
CDH11P55287 ELOCP8-201ENST00000439309 332 ntBASIC3.93□□□□□ -1.78
CDH11P55287 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.93□□□□□ -1.78
CDH11P55287 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CDH11P55287 ELOCP15-201ENST00000442090 332 ntBASIC3.93□□□□□ -1.78
CDH11P55287 NDUFS5P3-201ENST00000450668 321 ntBASIC3.93□□□□□ -1.78
CDH11P55287 RPS15AP1-201ENST00000457423 391 ntBASIC3.93□□□□□ -1.78
CDH11P55287 AC011276.1-201ENST00000469688 323 ntBASIC3.93□□□□□ -1.78
CDH11P55287 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.93□□□□□ -1.78
CDH11P55287 AC017037.1-201ENST00000508460 471 ntBASIC3.93□□□□□ -1.78
CDH11P55287 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CDH11P55287 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.93□□□□□ -1.78
CDH11P55287 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.93□□□□□ -1.78
CDH11P55287 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.93□□□□□ -1.78
CDH11P55287 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.93□□□□□ -1.78
CDH11P55287 AL352979.3-201ENST00000553515 247 ntBASIC3.93□□□□□ -1.78
CDH11P55287 AC145350.1-201ENST00000567426 208 ntBASIC3.93□□□□□ -1.78
CDH11P55287 AC017100.2-201ENST00000584628 355 ntBASIC3.93□□□□□ -1.78
CDH11P55287 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.93□□□□□ -1.78
CDH11P55287 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.93□□□□□ -1.78
CDH11P55287 AC080013.3-201ENST00000606839 578 ntBASIC3.93□□□□□ -1.78
CDH11P55287 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms