Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.92□□□□□ -1.78
ACLYP53396 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.92□□□□□ -1.78
ACLYP53396 MIR5680-201ENST00000577577 84 ntBASIC3.92□□□□□ -1.78
ACLYP53396 MIR4458-201ENST00000578872 75 ntBASIC3.92□□□□□ -1.78
ACLYP53396 MIR4325-201ENST00000583049 90 ntBASIC3.92□□□□□ -1.78
ACLYP53396 AP003117.1-201ENST00000602771 554 ntBASIC3.92□□□□□ -1.78
ACLYP53396 MTCO3P22-201ENST00000603219 784 ntBASIC3.92□□□□□ -1.78
ACLYP53396 AP004607.9-201ENST00000618202 316 ntBASIC3.92□□□□□ -1.78
ACLYP53396 AL359715.5-201ENST00000623431 443 ntBASIC3.92□□□□□ -1.78
ACLYP53396 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.92□□□□□ -1.78
ACLYP53396 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.92□□□□□ -1.78
ACLYP53396 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ACLYP53396 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ACLYP53396 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
ACLYP53396 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
ACLYP53396 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
ACLYP53396 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
ACLYP53396 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.92□□□□□ -1.78
ACLYP53396 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.91□□□□□ -1.78
ACLYP53396 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.91□□□□□ -1.78
ACLYP53396 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
ACLYP53396 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.91□□□□□ -1.78
ACLYP53396 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
ACLYP53396 RNA5SP374-201ENST00000362939 125 ntBASIC3.91□□□□□ -1.78
ACLYP53396 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.91□□□□□ -1.78
ACLYP53396 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.91□□□□□ -1.78
ACLYP53396 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
ACLYP53396 MIR708-201ENST00000390708 88 ntBASIC3.91□□□□□ -1.78
ACLYP53396 TAF9BP1-201ENST00000396646 746 ntBASIC3.91□□□□□ -1.78
ACLYP53396 MTHFD2P2-201ENST00000407725 247 ntBASIC3.91□□□□□ -1.78
ACLYP53396 AL024507.1-201ENST00000412741 274 ntBASIC3.91□□□□□ -1.78
ACLYP53396 RANP4-201ENST00000413361 655 ntBASIC3.91□□□□□ -1.78
ACLYP53396 MTND2P11-201ENST00000423638 648 ntBASIC3.91□□□□□ -1.78
ACLYP53396 SDCBPP2-201ENST00000424643 885 ntBASIC3.91□□□□□ -1.78
ACLYP53396 OSTCP5-201ENST00000425293 453 ntBASIC3.91□□□□□ -1.78
ACLYP53396 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.91□□□□□ -1.78
ACLYP53396 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.91□□□□□ -1.78
ACLYP53396 AC087650.1-201ENST00000431445 468 ntBASIC3.91□□□□□ -1.78
ACLYP53396 AC236972.1-201ENST00000433225 199 ntBASIC3.91□□□□□ -1.78
ACLYP53396 NDUFB1P1-201ENST00000435191 180 ntBASIC3.91□□□□□ -1.78
ACLYP53396 AL671855.1-201ENST00000446875 1203 ntBASIC3.91□□□□□ -1.78
ACLYP53396 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.91□□□□□ -1.78
ACLYP53396 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.91□□□□□ -1.78
ACLYP53396 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.91□□□□□ -1.78
ACLYP53396 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.91□□□□□ -1.78
ACLYP53396 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.91□□□□□ -1.78
ACLYP53396 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.91□□□□□ -1.78
ACLYP53396 RNU6-889P-201ENST00000517189 103 ntBASIC3.91□□□□□ -1.78
ACLYP53396 OR4U1P-201ENST00000554958 912 ntBASIC3.91□□□□□ -1.78
ACLYP53396 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.91□□□□□ -1.78
ACLYP53396 MIR4513-201ENST00000581077 86 ntBASIC3.91□□□□□ -1.78
ACLYP53396 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.91□□□□□ -1.78
ACLYP53396 AC010680.3-201ENST00000604215 520 ntBASIC3.91□□□□□ -1.78
ACLYP53396 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.91□□□□□ -1.78
ACLYP53396 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
ACLYP53396 MIR6852-201ENST00000621699 66 ntBASIC3.91□□□□□ -1.78
ACLYP53396 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.91□□□□□ -1.78
ACLYP53396 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.91□□□□□ -1.78
ACLYP53396 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
ACLYP53396 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
ACLYP53396 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
ACLYP53396 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
ACLYP53396 BDP1P-201ENST00000582658 1990 ntBASIC3.91□□□□□ -1.78
ACLYP53396 AL353743.1-202ENST00000431724 1695 ntBASIC3.9□□□□□ -1.78
ACLYP53396 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
ACLYP53396 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
ACLYP53396 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
ACLYP53396 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
ACLYP53396 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
ACLYP53396 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
ACLYP53396 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
ACLYP53396 UBA52P6-201ENST00000399822 382 ntBASIC3.9□□□□□ -1.79
ACLYP53396 SAGE2P-201ENST00000420011 2126 ntBASIC3.9□□□□□ -1.79
ACLYP53396 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.9□□□□□ -1.79
ACLYP53396 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.9□□□□□ -1.79
ACLYP53396 RPL34P26-201ENST00000445636 354 ntBASIC3.9□□□□□ -1.79
ACLYP53396 RPL23AP71-201ENST00000470966 469 ntBASIC3.9□□□□□ -1.79
ACLYP53396 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.9□□□□□ -1.79
ACLYP53396 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
ACLYP53396 RNU6-760P-201ENST00000516078 97 ntBASIC3.9□□□□□ -1.79
ACLYP53396 IGHV3-32-201ENST00000519182 355 ntBASIC3.9□□□□□ -1.79
ACLYP53396 IGLVIV-53-201ENST00000520107 367 ntBASIC3.9□□□□□ -1.79
ACLYP53396 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.9□□□□□ -1.79
ACLYP53396 AL161713.1-201ENST00000555538 145 ntBASIC3.9□□□□□ -1.79
ACLYP53396 AC115085.1-201ENST00000588924 229 ntBASIC3.9□□□□□ -1.79
ACLYP53396 AC245128.3-201ENST00000594721 748 ntBASIC3.9□□□□□ -1.79
ACLYP53396 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.9□□□□□ -1.79
ACLYP53396 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.9□□□□□ -1.79
ACLYP53396 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.9□□□□□ -1.79
ACLYP53396 AL354976.1-201ENST00000613843 387 ntBASIC3.9□□□□□ -1.79
ACLYP53396 AC009032.1-201ENST00000617574 431 ntBASIC3.9□□□□□ -1.79
ACLYP53396 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
ACLYP53396 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
ACLYP53396 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.9□□□□□ -1.79
ACLYP53396 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
ACLYP53396 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.9□□□□□ -1.79
ACLYP53396 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.89□□□□□ -1.79
ACLYP53396 AC007529.1-201ENST00000418574 2178 ntBASIC3.89□□□□□ -1.79
ACLYP53396 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
ACLYP53396 AC090229.1-201ENST00000590983 1609 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms