Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 TCP11X1-202ENST00000622971 1372 ntBASIC6.07□□□□□ -1.44
USP11P51784 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
USP11P51784 RNU6-254P-201ENST00000363377 107 ntBASIC6.07□□□□□ -1.44
USP11P51784 Y_RNA.144-201ENST00000363521 113 ntBASIC6.07□□□□□ -1.44
USP11P51784 Y_RNA.216-201ENST00000364205 93 ntBASIC6.07□□□□□ -1.44
USP11P51784 Y_RNA.481-201ENST00000384373 102 ntBASIC6.07□□□□□ -1.44
USP11P51784 SNORA67-201ENST00000384423 137 ntBASIC6.07□□□□□ -1.44
USP11P51784 RNU6-907P-201ENST00000390924 102 ntBASIC6.07□□□□□ -1.44
USP11P51784 HSPA8P15-201ENST00000401676 786 ntBASIC6.07□□□□□ -1.44
USP11P51784 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC6.07□□□□□ -1.44
USP11P51784 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.07□□□□□ -1.44
USP11P51784 SPA17P1-201ENST00000416656 452 ntBASIC6.07□□□□□ -1.44
USP11P51784 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC6.07□□□□□ -1.44
USP11P51784 AL592293.2-201ENST00000422292 996 ntBASIC6.07□□□□□ -1.44
USP11P51784 AL353678.1-201ENST00000422735 741 ntBASIC6.07□□□□□ -1.44
USP11P51784 AL589872.1-201ENST00000426602 288 ntBASIC6.07□□□□□ -1.44
USP11P51784 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC6.07□□□□□ -1.44
USP11P51784 BRWD1P3-201ENST00000428816 390 ntBASIC6.07□□□□□ -1.44
USP11P51784 LSM1P1-201ENST00000438629 273 ntBASIC6.07□□□□□ -1.44
USP11P51784 HMGB3P12-201ENST00000438745 556 ntBASIC6.07□□□□□ -1.44
USP11P51784 UBE2V1P5-201ENST00000440070 405 ntBASIC6.07□□□□□ -1.44
USP11P51784 AL121877.1-201ENST00000453704 622 ntBASIC6.07□□□□□ -1.44
USP11P51784 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC6.07□□□□□ -1.44
USP11P51784 AC079168.1-201ENST00000458741 345 ntBASIC6.07□□□□□ -1.44
USP11P51784 AL035404.1-201ENST00000497982 568 ntBASIC6.07□□□□□ -1.44
USP11P51784 AC111193.1-201ENST00000504097 155 ntBASIC6.07□□□□□ -1.44
USP11P51784 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC6.07□□□□□ -1.44
USP11P51784 AC098799.3-201ENST00000506095 438 ntBASIC6.07□□□□□ -1.44
USP11P51784 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC6.07□□□□□ -1.44
USP11P51784 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC6.07□□□□□ -1.44
USP11P51784 AC022360.1-201ENST00000521058 340 ntBASIC6.07□□□□□ -1.44
USP11P51784 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC6.07□□□□□ -1.44
USP11P51784 RPL10P14-201ENST00000565265 298 ntBASIC6.07□□□□□ -1.44
USP11P51784 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC6.07□□□□□ -1.44
USP11P51784 MTCYBP13-201ENST00000578634 1093 ntBASIC6.07□□□□□ -1.44
USP11P51784 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC6.07□□□□□ -1.44
USP11P51784 NRBF2P1-201ENST00000587407 859 ntBASIC6.07□□□□□ -1.44
USP11P51784 AL133338.2-201ENST00000604292 736 ntBASIC6.07□□□□□ -1.44
USP11P51784 AC124312.5-201ENST00000604451 268 ntBASIC6.07□□□□□ -1.44
USP11P51784 AC009027.1-201ENST00000604510 479 ntBASIC6.07□□□□□ -1.44
USP11P51784 BCRP9-201ENST00000605312 388 ntBASIC6.07□□□□□ -1.44
USP11P51784 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC6.07□□□□□ -1.44
USP11P51784 AL732618.1-201ENST00000623251 301 ntBASIC6.07□□□□□ -1.44
USP11P51784 AC099654.6-201ENST00000636487 512 ntBASIC6.07□□□□□ -1.44
USP11P51784 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
USP11P51784 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
USP11P51784 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
USP11P51784 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
USP11P51784 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
USP11P51784 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6.07□□□□□ -1.44
USP11P51784 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
USP11P51784 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
USP11P51784 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.07□□□□□ -1.44
USP11P51784 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
USP11P51784 OR9K1P-202ENST00000641111 3217 ntBASIC6.06□□□□□ -1.44
USP11P51784 AL360270.2-201ENST00000562952 5985 ntBASIC6.06□□□□□ -1.44
USP11P51784 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
USP11P51784 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC6.06□□□□□ -1.44
USP11P51784 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
USP11P51784 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.06□□□□□ -1.44
USP11P51784 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
USP11P51784 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
USP11P51784 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
USP11P51784 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
USP11P51784 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
USP11P51784 RNU4-7P-201ENST00000364758 141 ntBASIC6.06□□□□□ -1.44
USP11P51784 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
USP11P51784 RNU1-149P-201ENST00000390870 161 ntBASIC6.06□□□□□ -1.44
USP11P51784 RPA3-203ENST00000401447 414 ntTSL 3 BASIC6.06□□□□□ -1.44
USP11P51784 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC6.06□□□□□ -1.44
USP11P51784 AC211486.3-201ENST00000412694 621 ntBASIC6.06□□□□□ -1.44
USP11P51784 RPL35AP24-201ENST00000413846 330 ntBASIC6.06□□□□□ -1.44
USP11P51784 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC6.06□□□□□ -1.44
USP11P51784 RPL26P29-201ENST00000415623 438 ntBASIC6.06□□□□□ -1.44
USP11P51784 MTCO2P5-201ENST00000422621 426 ntBASIC6.06□□□□□ -1.44
USP11P51784 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC6.06□□□□□ -1.44
USP11P51784 AL935212.3-201ENST00000450729 284 ntBASIC6.06□□□□□ -1.44
USP11P51784 RBMY2TP-201ENST00000451162 947 ntBASIC6.06□□□□□ -1.44
USP11P51784 MTND1P12-201ENST00000455231 147 ntBASIC6.06□□□□□ -1.44
USP11P51784 UBA52P7-201ENST00000486088 380 ntBASIC6.06□□□□□ -1.44
USP11P51784 RPS27P23-201ENST00000487608 251 ntBASIC6.06□□□□□ -1.44
USP11P51784 RPS24P16-201ENST00000497294 392 ntBASIC6.06□□□□□ -1.44
USP11P51784 RPSAP51-201ENST00000497462 645 ntBASIC6.06□□□□□ -1.44
USP11P51784 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC6.06□□□□□ -1.44
USP11P51784 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.06□□□□□ -1.44
USP11P51784 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC6.06□□□□□ -1.44
USP11P51784 POU5F1P7-201ENST00000508759 541 ntBASIC6.06□□□□□ -1.44
USP11P51784 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.06□□□□□ -1.44
USP11P51784 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC6.06□□□□□ -1.44
USP11P51784 RNU6-445P-201ENST00000516949 107 ntBASIC6.06□□□□□ -1.44
USP11P51784 SNORA48.10-201ENST00000516965 160 ntBASIC6.06□□□□□ -1.44
USP11P51784 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC6.06□□□□□ -1.44
USP11P51784 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.06□□□□□ -1.44
USP11P51784 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC6.06□□□□□ -1.44
USP11P51784 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC6.06□□□□□ -1.44
USP11P51784 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.06□□□□□ -1.44
USP11P51784 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC6.06□□□□□ -1.44
USP11P51784 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC6.06□□□□□ -1.44
USP11P51784 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC6.06□□□□□ -1.44
USP11P51784 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms