Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
MRE11P49959 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC5.58□□□□□ -1.52
MRE11P49959 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC5.58□□□□□ -1.52
MRE11P49959 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.58□□□□□ -1.52
MRE11P49959 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.58□□□□□ -1.52
MRE11P49959 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.58□□□□□ -1.52
MRE11P49959 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
MRE11P49959 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.58□□□□□ -1.52
MRE11P49959 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.58□□□□□ -1.52
MRE11P49959 AC008507.1-201ENST00000587506 734 ntBASIC5.58□□□□□ -1.52
MRE11P49959 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.58□□□□□ -1.52
MRE11P49959 AC011453.2-201ENST00000603737 729 ntBASIC5.58□□□□□ -1.52
MRE11P49959 AL031320.1-201ENST00000604177 357 ntBASIC5.58□□□□□ -1.52
MRE11P49959 Z99129.1-201ENST00000612510 255 ntBASIC5.58□□□□□ -1.52
MRE11P49959 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.58□□□□□ -1.52
MRE11P49959 U6.107-201ENST00000637108 79 ntBASIC5.58□□□□□ -1.52
MRE11P49959 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
MRE11P49959 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
MRE11P49959 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.58□□□□□ -1.52
MRE11P49959 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
MRE11P49959 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.58□□□□□ -1.52
MRE11P49959 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
MRE11P49959 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.57□□□□□ -1.52
MRE11P49959 AC010329.2-201ENST00000595195 2737 ntBASIC5.57□□□□□ -1.52
MRE11P49959 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5.57□□□□□ -1.52
MRE11P49959 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
MRE11P49959 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
MRE11P49959 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.57□□□□□ -1.52
MRE11P49959 RNA5SP52-201ENST00000362448 134 ntBASIC5.57□□□□□ -1.52
MRE11P49959 SNORA17.1-201ENST00000362945 126 ntBASIC5.57□□□□□ -1.52
MRE11P49959 RNU6-867P-201ENST00000364956 107 ntBASIC5.57□□□□□ -1.52
MRE11P49959 RNU6-761P-201ENST00000384148 107 ntBASIC5.57□□□□□ -1.52
MRE11P49959 SNORD65.1-201ENST00000390889 71 ntBASIC5.57□□□□□ -1.52
MRE11P49959 AL080315.1-201ENST00000406055 466 ntBASIC5.57□□□□□ -1.52
MRE11P49959 RN7SKP263-201ENST00000411194 309 ntBASIC5.57□□□□□ -1.52
MRE11P49959 AL158073.1-201ENST00000426848 1104 ntBASIC5.57□□□□□ -1.52
MRE11P49959 DYNLL1P7-201ENST00000429273 258 ntBASIC5.57□□□□□ -1.52
MRE11P49959 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.57□□□□□ -1.52
MRE11P49959 FTH1P16-201ENST00000435241 552 ntBASIC5.57□□□□□ -1.52
MRE11P49959 USP9YP29-201ENST00000445112 563 ntBASIC5.57□□□□□ -1.52
MRE11P49959 AL035551.1-201ENST00000446931 348 ntBASIC5.57□□□□□ -1.52
MRE11P49959 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC5.57□□□□□ -1.52
MRE11P49959 DDX39BP2-208ENST00000453923 258 ntBASIC5.57□□□□□ -1.52
MRE11P49959 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC5.57□□□□□ -1.52
MRE11P49959 AC108475.1-201ENST00000507880 950 ntBASIC5.57□□□□□ -1.52
MRE11P49959 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.57□□□□□ -1.52
MRE11P49959 Y_RNA.719-201ENST00000517156 106 ntBASIC5.57□□□□□ -1.52
MRE11P49959 OR4C2P-201ENST00000530855 1064 ntBASIC5.57□□□□□ -1.52
MRE11P49959 AC100770.1-201ENST00000532310 322 ntBASIC5.57□□□□□ -1.52
MRE11P49959 AC016957.1-201ENST00000534895 309 ntBASIC5.57□□□□□ -1.52
MRE11P49959 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.57□□□□□ -1.52
MRE11P49959 AC136619.2-201ENST00000563361 631 ntBASIC5.57□□□□□ -1.52
MRE11P49959 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.57□□□□□ -1.52
MRE11P49959 MTND1P15-201ENST00000579262 949 ntBASIC5.57□□□□□ -1.52
MRE11P49959 AC011447.4-201ENST00000587562 111 ntBASIC5.57□□□□□ -1.52
MRE11P49959 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.57□□□□□ -1.52
MRE11P49959 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.57□□□□□ -1.52
MRE11P49959 AC090186.1-201ENST00000605991 572 ntBASIC5.57□□□□□ -1.52
MRE11P49959 AC092354.1-201ENST00000606057 376 ntBASIC5.57□□□□□ -1.52
MRE11P49959 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.57□□□□□ -1.52
MRE11P49959 AC008498.1-201ENST00000613012 531 ntBASIC5.57□□□□□ -1.52
MRE11P49959 AC025594.3-201ENST00000613068 790 ntBASIC5.57□□□□□ -1.52
MRE11P49959 AC023509.5-201ENST00000617434 807 ntBASIC5.57□□□□□ -1.52
MRE11P49959 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.57□□□□□ -1.52
MRE11P49959 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
MRE11P49959 AL445487.1-201ENST00000415694 1580 ntBASIC5.57□□□□□ -1.52
MRE11P49959 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.57□□□□□ -1.52
MRE11P49959 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
MRE11P49959 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.57□□□□□ -1.52
MRE11P49959 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
MRE11P49959 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
MRE11P49959 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
MRE11P49959 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
MRE11P49959 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
MRE11P49959 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.56□□□□□ -1.52
MRE11P49959 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
MRE11P49959 SLC10A5P1-201ENST00000379063 1306 ntBASIC5.56□□□□□ -1.52
MRE11P49959 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
MRE11P49959 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.56□□□□□ -1.52
MRE11P49959 AL121657.1-201ENST00000327215 531 ntBASIC5.56□□□□□ -1.52
MRE11P49959 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
MRE11P49959 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.56□□□□□ -1.52
MRE11P49959 MIR133B-201ENST00000362210 119 ntBASIC5.56□□□□□ -1.52
MRE11P49959 RNA5SP171-201ENST00000391071 115 ntBASIC5.56□□□□□ -1.52
MRE11P49959 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
MRE11P49959 AC092745.2-202ENST00000411880 369 ntBASIC5.56□□□□□ -1.52
MRE11P49959 TPT1P2-201ENST00000413105 503 ntBASIC5.56□□□□□ -1.52
MRE11P49959 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC5.56□□□□□ -1.52
MRE11P49959 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
MRE11P49959 MTCO1P54-201ENST00000430139 712 ntBASIC5.56□□□□□ -1.52
MRE11P49959 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC5.56□□□□□ -1.52
MRE11P49959 RPS29P9-201ENST00000440360 171 ntBASIC5.56□□□□□ -1.52
MRE11P49959 TRIM60P18-201ENST00000441518 828 ntBASIC5.56□□□□□ -1.52
MRE11P49959 AC104651.2-201ENST00000447549 528 ntBASIC5.56□□□□□ -1.52
MRE11P49959 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.56□□□□□ -1.52
MRE11P49959 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
MRE11P49959 AC116337.2-201ENST00000477662 156 ntBASIC5.56□□□□□ -1.52
MRE11P49959 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.56□□□□□ -1.52
MRE11P49959 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.56□□□□□ -1.52
MRE11P49959 RNA5SP154-201ENST00000516193 111 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms