Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC066616.2-201ENST00000559334 1481 ntBASIC3.3□□□□□ -1.88
CX3CR1P49238 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CX3CR1P49238 AL133383.2-201ENST00000622958 2336 ntBASIC3.3□□□□□ -1.88
CX3CR1P49238 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.3□□□□□ -1.88
CX3CR1P49238 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
CX3CR1P49238 AF127577.6-201ENST00000623352 2191 ntBASIC3.3□□□□□ -1.88
CX3CR1P49238 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CX3CR1P49238 RNU1-13P-201ENST00000384499 162 ntBASIC3.3□□□□□ -1.88
CX3CR1P49238 ZNF602P-201ENST00000405929 924 ntBASIC3.3□□□□□ -1.88
CX3CR1P49238 SNORA11C-201ENST00000408532 129 ntBASIC3.3□□□□□ -1.88
CX3CR1P49238 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.3□□□□□ -1.88
CX3CR1P49238 RNU6-272P-201ENST00000411028 104 ntBASIC3.3□□□□□ -1.88
CX3CR1P49238 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.3□□□□□ -1.88
CX3CR1P49238 PTP4A1P5-201ENST00000420305 455 ntBASIC3.3□□□□□ -1.88
CX3CR1P49238 AC002075.2-201ENST00000425207 252 ntBASIC3.3□□□□□ -1.88
CX3CR1P49238 FAR1P1-201ENST00000427163 934 ntBASIC3.3□□□□□ -1.88
CX3CR1P49238 C4BPAP2-201ENST00000428434 478 ntBASIC3.3□□□□□ -1.88
CX3CR1P49238 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.3□□□□□ -1.88
CX3CR1P49238 AL117339.2-201ENST00000430475 180 ntBASIC3.3□□□□□ -1.88
CX3CR1P49238 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.3□□□□□ -1.88
CX3CR1P49238 FABP5P3-201ENST00000437960 408 ntBASIC3.3□□□□□ -1.88
CX3CR1P49238 SNORA71B-202ENST00000439232 272 ntBASIC3.3□□□□□ -1.88
CX3CR1P49238 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.3□□□□□ -1.88
CX3CR1P49238 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.3□□□□□ -1.88
CX3CR1P49238 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.3□□□□□ -1.88
CX3CR1P49238 AC009220.1-201ENST00000451614 275 ntBASIC3.3□□□□□ -1.88
CX3CR1P49238 CEACAMP4-201ENST00000457676 421 ntBASIC3.3□□□□□ -1.88
CX3CR1P49238 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.3□□□□□ -1.88
CX3CR1P49238 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.3□□□□□ -1.88
CX3CR1P49238 AP000893.1-201ENST00000474462 794 ntBASIC3.3□□□□□ -1.88
CX3CR1P49238 AC015724.1-201ENST00000478577 156 ntBASIC3.3□□□□□ -1.88
CX3CR1P49238 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CX3CR1P49238 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
CX3CR1P49238 AC104108.1-201ENST00000509930 412 ntBASIC3.3□□□□□ -1.88
CX3CR1P49238 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.3□□□□□ -1.88
CX3CR1P49238 MTCO1P35-201ENST00000515270 228 ntBASIC3.3□□□□□ -1.88
CX3CR1P49238 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.3□□□□□ -1.88
CX3CR1P49238 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.3□□□□□ -1.88
CX3CR1P49238 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CX3CR1P49238 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.3□□□□□ -1.88
CX3CR1P49238 AL731537.2-201ENST00000561565 951 ntBASIC3.3□□□□□ -1.88
CX3CR1P49238 MTCYBP28-201ENST00000566728 1132 ntBASIC3.3□□□□□ -1.88
CX3CR1P49238 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.3□□□□□ -1.88
CX3CR1P49238 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.3□□□□□ -1.88
CX3CR1P49238 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.3□□□□□ -1.88
CX3CR1P49238 AL606490.9-201ENST00000603331 271 ntBASIC3.3□□□□□ -1.88
CX3CR1P49238 AC079880.2-201ENST00000603790 1213 ntBASIC3.3□□□□□ -1.88
CX3CR1P49238 AL009028.1-201ENST00000604895 802 ntBASIC3.3□□□□□ -1.88
CX3CR1P49238 AL592295.2-201ENST00000612578 206 ntBASIC3.3□□□□□ -1.88
CX3CR1P49238 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CX3CR1P49238 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.3□□□□□ -1.88
CX3CR1P49238 AL109659.3-201ENST00000624985 950 ntBASIC3.3□□□□□ -1.88
CX3CR1P49238 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.3□□□□□ -1.88
CX3CR1P49238 AL356118.1-201ENST00000635272 1078 ntBASIC3.3□□□□□ -1.88
CX3CR1P49238 MAPK10-372ENST00000641954 3413 ntBASIC3.3□□□□□ -1.88
CX3CR1P49238 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CX3CR1P49238 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CX3CR1P49238 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.3□□□□□ -1.88
CX3CR1P49238 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CX3CR1P49238 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CX3CR1P49238 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.29□□□□□ -1.88
CX3CR1P49238 ELL2P4-201ENST00000446870 1376 ntBASIC3.29□□□□□ -1.88
CX3CR1P49238 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CX3CR1P49238 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CX3CR1P49238 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CX3CR1P49238 AL122126.1-201ENST00000546905 1318 ntBASIC3.29□□□□□ -1.88
CX3CR1P49238 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.29□□□□□ -1.88
CX3CR1P49238 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CX3CR1P49238 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CX3CR1P49238 AL589826.1-201ENST00000340697 249 ntBASIC3.29□□□□□ -1.88
CX3CR1P49238 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CX3CR1P49238 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CX3CR1P49238 MIR141-201ENST00000384975 95 ntBASIC3.29□□□□□ -1.88
CX3CR1P49238 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
CX3CR1P49238 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.29□□□□□ -1.88
CX3CR1P49238 AL357078.2-201ENST00000416486 427 ntBASIC3.29□□□□□ -1.88
CX3CR1P49238 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CX3CR1P49238 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.29□□□□□ -1.88
CX3CR1P49238 OR8F1P-201ENST00000425243 930 ntBASIC3.29□□□□□ -1.88
CX3CR1P49238 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CX3CR1P49238 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.29□□□□□ -1.88
CX3CR1P49238 AC239367.2-201ENST00000447309 705 ntBASIC3.29□□□□□ -1.88
CX3CR1P49238 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.29□□□□□ -1.88
CX3CR1P49238 SNRPGP3-201ENST00000469405 227 ntBASIC3.29□□□□□ -1.88
CX3CR1P49238 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.29□□□□□ -1.88
CX3CR1P49238 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.29□□□□□ -1.88
CX3CR1P49238 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.29□□□□□ -1.88
CX3CR1P49238 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.29□□□□□ -1.88
CX3CR1P49238 OR4C2P-201ENST00000530855 1064 ntBASIC3.29□□□□□ -1.88
CX3CR1P49238 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.29□□□□□ -1.88
CX3CR1P49238 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.29□□□□□ -1.88
CX3CR1P49238 CYP2C60P-201ENST00000566088 139 ntBASIC3.29□□□□□ -1.88
CX3CR1P49238 ATP5F1P7-201ENST00000567330 760 ntBASIC3.29□□□□□ -1.88
CX3CR1P49238 AGGF1P6-201ENST00000569213 976 ntBASIC3.29□□□□□ -1.88
CX3CR1P49238 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.29□□□□□ -1.88
CX3CR1P49238 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.29□□□□□ -1.88
CX3CR1P49238 SNRPGP15-201ENST00000600149 222 ntBASIC3.29□□□□□ -1.88
CX3CR1P49238 AC007566.2-201ENST00000603642 413 ntBASIC3.29□□□□□ -1.88
CX3CR1P49238 MIR6748-201ENST00000610433 71 ntBASIC3.29□□□□□ -1.88
CX3CR1P49238 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms